ML264_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ML264 perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ML264_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin 0.175258
STC1 stanniocalcin 1 0.138436
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.130967
COL6A3 collagen, type VI, alpha 3 0.108358
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0918435
TGFBI transforming growth factor, beta-induced, 68kDa 0.0916135
IGFBP3 insulin-like growth factor binding protein 3 0.0881342
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0863233
CXCL8 chemokine (C-X-C motif) ligand 8 0.0860564
CD44 CD44 molecule (Indian blood group) 0.0847085
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0843326
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0826192
CANX calnexin 0.0770862
NAMPT nicotinamide phosphoribosyltransferase 0.0756889
HLA-B major histocompatibility complex, class I, B 0.0727928
CALU calumenin 0.0716842
KYNU kynureninase 0.070764
IGFBP7 insulin-like growth factor binding protein 7 0.0696454
FTL ferritin, light polypeptide 0.0677736
ARRDC3 arrestin domain containing 3 0.0666815
HLA-A major histocompatibility complex, class I, A 0.0656328
ECE1 endothelin converting enzyme 1 0.0647312
SOD2 superoxide dismutase 2, mitochondrial 0.0641224
IL6 interleukin 6 0.0640024
ENO1 enolase 1, (alpha) 0.0637035
EXT1 exostosin glycosyltransferase 1 0.0617596
ELL2 elongation factor, RNA polymerase II, 2 0.0562363
CALR calreticulin 0.0557952
AKAP12 A kinase (PRKA) anchor protein 12 0.0557443
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.054994
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0549933
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0545242
FN1 fibronectin 1 0.0530509
ADM adrenomedullin 0.0517479
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0500282
DKK3 dickkopf WNT signaling pathway inhibitor 3 0.0499351
TFPI2 tissue factor pathway inhibitor 2 0.0486349
DSCAM Down syndrome cell adhesion molecule 0.0480506
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0476655
PGK1 phosphoglycerate kinase 1 0.0468928
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0468244
TPT1 tumor protein, translationally-controlled 1 0.046333
GOLGA4 golgin A4 0.0442959
RPS8 ribosomal protein S8 0.0440574
ERRFI1 ERBB receptor feedback inhibitor 1 0.0439223
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0430085
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0427411
HSPA8 heat shock 70kDa protein 8 0.0425627
MYH9 myosin, heavy chain 9, non-muscle 0.0421195
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.042028
SQSTM1 sequestosome 1 0.0416863
RAB1A RAB1A, member RAS oncogene family 0.0407134
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0404831
LGALS1 lectin, galactoside-binding, soluble, 1 0.0394918
ANXA1 annexin A1 0.0391874
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0367805
ZSWIM6 zinc finger, SWIM-type containing 6 0.0362943
HSPH1 heat shock 105kDa/110kDa protein 1 0.0361546
POM121 POM121 transmembrane nucleoporin 0.0360944
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0353902
ANXA2 annexin A2 0.0346014
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0345193
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0343564
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0342272
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0339202
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0334633
FAM13A family with sequence similarity 13, member A 0.0331638
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0328126
SPAG9 sperm associated antigen 9 0.0324403
ACVR1 activin A receptor, type I 0.0321635
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0319264
ERBIN erbb2 interacting protein 0.031777
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0315912
YIPF5 Yip1 domain family, member 5 0.0315652
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0313452
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0309091
TNIP1 TNFAIP3 interacting protein 1 0.0307634
TENT2 terminal nucleotidyltransferase 2 0.0305682
SEC31A SEC31 homolog A (S. cerevisiae) 0.0304392
N4BP2L2 NEDD4 binding protein 2-like 2 0.0304364
WNK1 WNK lysine deficient protein kinase 1 0.0301059
BZW1 basic leucine zipper and W2 domains 1 0.0300295
KMT2E lysine (K)-specific methyltransferase 2E 0.0297065
UBE2H ubiquitin-conjugating enzyme E2H 0.029514
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0291621
TFG TRK-fused gene 0.0289061
TRA2A transformer 2 alpha homolog (Drosophila) 0.0288859
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0286452
TMED9 transmembrane emp24 protein transport domain containing 9 0.0281194
MTDH metadherin 0.0278149
ZNF395 zinc finger protein 395 0.027738
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.027573
WNT5A wingless-type MMTV integration site family, member 5A 0.0275567
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0274323
DDIT4 DNA-damage-inducible transcript 4 0.0273441
COL3A1 collagen, type III, alpha 1 0.0272799
NAP1L1 nucleosome assembly protein 1-like 1 0.027164
FNDC3A fibronectin type III domain containing 3A 0.0269667
PTMA prothymosin, alpha 0.0265274
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0264599

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.088719
CDH13 cadherin 13 -0.0797884
VIM vimentin -0.0734122
MT2A metallothionein 2A -0.0666549
EGFR epidermal growth factor receptor -0.0634727
AKAP9 A kinase (PRKA) anchor protein 9 -0.0526366
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0504616
MT1X metallothionein 1X -0.0500883
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0482892
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0423444
NRXN3 neurexin 3 -0.0420836
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0419392
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.040382
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0345861
EFNA5 ephrin-A5 -0.03355
NAV1 neuron navigator 1 -0.0335409
RTN4 reticulon 4 -0.0328858
TRIO trio Rho guanine nucleotide exchange factor -0.0311661
MRPS6 mitochondrial ribosomal protein S6 -0.0309099
HMGA2 high mobility group AT-hook 2 -0.029981
NBAS neuroblastoma amplified sequence -0.0290412
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 -0.0285624
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0276619
TSPAN5 tetraspanin 5 -0.0274855
TSC22D2 TSC22 domain family, member 2 -0.0270144
WSB1 WD repeat and SOCS box containing 1 -0.0267766
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0267137
KIF16B kinesin family member 16B -0.0264933
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0261014
MBD5 methyl-CpG binding domain protein 5 -0.0260312
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0259065
PKM pyruvate kinase, muscle -0.025727
RBM33 RNA binding motif protein 33 -0.0256742
SEC24D SEC24 family member D -0.0255734
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast) -0.025118
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0246604
RASA2 RAS p21 protein activator 2 -0.0246113
ALK anaplastic lymphoma receptor tyrosine kinase -0.0243953
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0243667
PDE10A phosphodiesterase 10A -0.0242974
CSMD2 CUB and Sushi multiple domains 2 -0.0241859
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2 -0.0241088
ZNF638 zinc finger protein 638 -0.0241013
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.023747
PPIG peptidylprolyl isomerase G (cyclophilin G) -0.0237452
TOP2A topoisomerase (DNA) II alpha 170kDa -0.023661
CENPF centromere protein F, 350/400kDa -0.0231054
OGA O-GlcNAcase -0.0230743
SEPTIN2 septin 2 -0.0229883
KRIT1 KRIT1, ankyrin repeat containing -0.0229779
LMNA lamin A/C -0.0225124
SCLT1 sodium channel and clathrin linker 1 -0.0221009
STRN3 striatin, calmodulin binding protein 3 -0.0219883
TCF25 transcription factor 25 (basic helix-loop-helix) -0.0219685
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0218033
COL6A2 collagen, type VI, alpha 2 -0.0216531
FOSL1 FOS-like antigen 1 -0.0216191
CDK19 cyclin-dependent kinase 19 -0.0215693
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase -0.0215499
DST dystonin -0.0215268
FAF1 Fas (TNFRSF6) associated factor 1 -0.0213643
TPX2 TPX2, microtubule-associated -0.0213516
HDLBP high density lipoprotein binding protein -0.0213237
SMYD3 SET and MYND domain containing 3 -0.0212428
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0211759
BIRC6 baculoviral IAP repeat containing 6 -0.0210467
SSBP2 single-stranded DNA binding protein 2 -0.0208304
ZMYND8 zinc finger, MYND-type containing 8 -0.0207885
LOC112694756 uncharaterized LOC112694756 -0.0207812
EGR1 early growth response 1 -0.0206781
MYOF myoferlin -0.0205511
SRSF11 serine/arginine-rich splicing factor 11 -0.0204314
ANKRD28 ankyrin repeat domain 28 -0.0202425
RPAP2 RNA polymerase II associated protein 2 -0.0201168
ECT2 epithelial cell transforming 2 -0.0201126
TNS3 tensin 3 -0.0200431
ATP11B ATPase, class VI, type 11B -0.0199838
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0199405
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -0.019812
VEGFA vascular endothelial growth factor A -0.0197981
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 -0.0197558
UBE2O ubiquitin-conjugating enzyme E2O -0.0196865
NAV2 neuron navigator 2 -0.0196778
KMT2A lysine (K)-specific methyltransferase 2A -0.0196199
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0196092
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0196005
CD109 CD109 molecule -0.0195823
OSBPL8 oxysterol binding protein-like 8 -0.0195503
PHACTR4 phosphatase and actin regulator 4 -0.0194264
ACTN4 actinin, alpha 4 -0.0193863
GARS1 glycyl-tRNA synthetase 1 -0.0193024
RELCH RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing -0.0192981
OSMR oncostatin M receptor -0.0192256
AFF3 AF4/FMR2 family, member 3 -0.0191842
DIP2A DIP2 disco-interacting protein 2 homolog A (Drosophila) -0.0190403
FRMD4A FERM domain containing 4A -0.0190267
C1D C1D nuclear receptor corepressor -0.0190102
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0189769
WDFY3 WD repeat and FYVE domain containing 3 -0.0189726
VKORC1L1 vitamin K epoxide reductase complex, subunit 1-like 1 -0.0188999