MRM1 Gene Set

Dataset CM4AI KOLF21J CRISPRi Gene Perturbation Atlas
Category transcriptomics
Type gene perturbation
Description mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)| (NCBI Entrez Gene Database, 79922)
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Genes

324 genes differentially expressed following the MRM1 gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas.

increased expression

Symbol Name Standardized Value
SIM2 single-minded family bHLH transcription factor 2 3.15532
CFAP157 cilia and flagella associated protein 157 3.15532
UBE2U ubiquitin-conjugating enzyme E2U (putative) 3.15532
FOXE3 forkhead box E3 3.15532
FMO3 flavin containing monooxygenase 3 3.15532
C1ORF141 chromosome 1 open reading frame 141 3.15532
CLNK cytokine-dependent hematopoietic cell linker 3.15532
ICAM4 intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) 3.15532
SIRPB2 signal-regulatory protein beta 2 3.15532
C2CD4A C2 calcium-dependent domain containing 4A 3.15532
GALNT15 polypeptide N-acetylgalactosaminyltransferase 15 3.15532
KRT222 keratin 222, type II 3.15532
CFAP206 cilia and flagella associated protein 206 3.15532
PLCD4 phospholipase C, delta 4 3.15532
CIMIP4 ciliary microtubule inner protein 4 3.15532
WNT2 wingless-type MMTV integration site family member 2 3.15532
ALDH8A1 aldehyde dehydrogenase 8 family, member A1 3.15532
STAP1 signal transducing adaptor family member 1 3.15532
TTLL2 tubulin tyrosine ligase-like family member 2 3.15532
HMGB4 high mobility group box 4 3.15532
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 3.15532
TBX22 T-box 22 3.1509
OR2B6 olfactory receptor, family 2, subfamily B, member 6 3.1509
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 3.1509
PDYN prodynorphin 3.1509
ROBO4 roundabout, axon guidance receptor, homolog 4 (Drosophila) 3.1509
SPANXB1 SPANX family, member B1 3.1509
SPACA3 sperm acrosome associated 3 3.1509
NXPE1 neurexophilin and PC-esterase domain family, member 1 3.1509
FOLR1 folate receptor 1 (adult) 3.1509
NDRG1 N-myc downstream regulated 1 3.1509
LOX lysyl oxidase 3.1509
TAS2R5 taste receptor, type 2, member 5 3.1509
SLC22A17 solute carrier family 22, member 17 3.1509
TPBGL trophoblast glycoprotein-like 3.1509
NCF1 neutrophil cytosolic factor 1 3.1509
PCDHGB3 protocadherin gamma subfamily B, 3 3.1509
OR13C3 olfactory receptor, family 13, subfamily C, member 3 3.1509
TPSD1 tryptase delta 1 3.1509
SH2D7 SH2 domain containing 7 3.1509
NAA11 N(alpha)-acetyltransferase 11, NatA catalytic subunit 3.1509
TAS2R19 taste receptor, type 2, member 19 3.1509
HCRTR2 hypocretin (orexin) receptor 2 3.1509
SP5 Sp5 transcription factor 3.1509
MYOM2 myomesin 2 3.1509
ATP1B4 ATPase, Na+/K+ transporting, beta 4 polypeptide 3.1509
XCL1 chemokine (C motif) ligand 1 3.1509
AADACL4 arylacetamide deacetylase-like 4 3.1509
GJB1 gap junction protein, beta 1, 32kDa 3.1509
ETV7 ets variant 7 3.1509
STRA8 stimulated by retinoic acid 8 3.1509
TMEM88 transmembrane protein 88 3.1509
MAG myelin associated glycoprotein 3.1509
CIMIP2B ciliary microtubule inner protein 2B 3.1509
MCHR2 melanin-concentrating hormone receptor 2 3.1509
PROP1 PROP paired-like homeobox 1 3.1509
MYH7 myosin, heavy chain 7, cardiac muscle, beta 3.1509
LOC122455340 uncharacterized LOC122455340 3.1509
ABCC11 ATP-binding cassette, sub-family C (CFTR/MRP), member 11 3.1509
TMPRSS7 transmembrane protease, serine 7 3.1509
DOK2 docking protein 2, 56kDa 3.1509
KHDC1L KH homology domain containing 1-like 3.1509
PCDHGA9 protocadherin gamma subfamily A, 9 3.1509
CBLIF cobalamin binding intrinsic factor 3.1509
SPMIP9 sperm microtubule inner protein 9 3.1509
SPDYE8 speedy/RINGO cell cycle regulator family member E8 3.1509
REELD1 reeler domain containing 1 3.1509
CTXND1 cortexin domain containing 1 3.1509
C20ORF204 chromosome 20 open reading frame 204 3.1509
MINDY4B MINDY family member 4B 3.1509
CFAP107 cilia and flagella associated protein 107 3.1509
PPDPFL pancreatic progenitor cell differentiation and proliferation factor like 3.1509
SYT15 synaptotagmin XV 3.1509
CCDC42 coiled-coil domain containing 42 3.1509
ROPN1 rhophilin associated tail protein 1 3.1509
C1QTNF9 C1q and tumor necrosis factor related protein 9 3.1509
C1QTNF8 C1q and tumor necrosis factor related protein 8 3.1509
TBX3 T-box 3 3.1509
SLAMF1 signaling lymphocytic activation molecule family member 1 3.1509
SH3TC1 SH3 domain and tetratricopeptide repeats 1 3.1509
TLR6 toll-like receptor 6 3.1509
SCRT1 scratch family zinc finger 1 3.1509
C10ORF62 chromosome 10 open reading frame 62 3.1509
INSRR insulin receptor-related receptor 3.1509
SPDYC speedy/RINGO cell cycle regulator family member C 3.1509
COX8C cytochrome c oxidase subunit VIIIC 3.1509
GDF9 growth differentiation factor 9 3.1509
TAS1R1 taste receptor, type 1, member 1 3.1509
ARMC12 armadillo repeat containing 12 3.1509
C9 complement component 9 3.1509
CLEC17A C-type lectin domain family 17, member A 3.1509
S100G S100 calcium binding protein G 3.1509
CDKN2A cyclin-dependent kinase inhibitor 2A 3.1509
OLAH oleoyl-ACP hydrolase 3.1509
CDRT15 CMT1A duplicated region transcript 15 3.1509
CFP complement factor properdin 3.1509
TBXA2R thromboxane A2 receptor 3.1509
EMP1 epithelial membrane protein 1 3.1509
TRADD TNFRSF1A-associated via death domain 3.1509
EMX2 empty spiracles homeobox 2 3.1509
HSPA1L heat shock 70kDa protein 1-like 3.1509
MAMDC4 MAM domain containing 4 3.1509
SERPINB11 serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene) 3.1509
SYNE3 spectrin repeat containing, nuclear envelope family member 3 3.1509
TNR tenascin R 3.1509
MRLN myoregulin 3.1509
HAMP hepcidin antimicrobial peptide 3.1509
ABCG8 ATP-binding cassette, sub-family G (WHITE), member 8 3.1509
KCNK3 potassium channel, two pore domain subfamily K, member 3 3.1509
CCL27 chemokine (C-C motif) ligand 27 3.1509
KRT3 keratin 3, type II 3.1509
PRR23A proline rich 23A 3.1509
ERMN ermin, ERM-like protein 3.1509
DRD2 dopamine receptor D2 3.1509
MS4A7 membrane-spanning 4-domains, subfamily A, member 7 3.1509
GOLGA8R golgin A8 family, member R 3.1509
C22ORF31 chromosome 22 open reading frame 31 3.1509
CNR2 cannabinoid receptor 2 (macrophage) 3.1509
GPR142 G protein-coupled receptor 142 3.1509
NKX6-2 NK6 homeobox 2 3.1509
OR13G1 olfactory receptor, family 13, subfamily G, member 1 3.1509
OTOP1 otopetrin 1 3.1509
SI sucrase-isomaltase (alpha-glucosidase) 3.1509
RIPPLY2 ripply transcriptional repressor 2 3.1509
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group) 3.1509
ITGA11 integrin, alpha 11 3.1509
CHIT1 chitinase 1 (chitotriosidase) 3.1509
UTS2R urotensin 2 receptor 3.1509
LRRC15 leucine rich repeat containing 15 3.1509
SPRR2A small proline-rich protein 2A 3.1509
ZFP92 ZFP92 zinc finger protein 3.1509
PLA1A phospholipase A1 member A 3.1509
HSPB9 heat shock protein, alpha-crystallin-related, B9 3.1509
SCGB1A1 secretoglobin, family 1A, member 1 (uteroglobin) 3.1509
CD180 CD180 molecule 3.1509
VWC2L von Willebrand factor C domain containing protein 2-like 3.1509
GPR62 G protein-coupled receptor 62 3.1509
SULT1C3 sulfotransferase family, cytosolic, 1C, member 3 3.1509
LANCL3 LanC lantibiotic synthetase component C-like 3 (bacterial) 3.1509
ANGPTL6 angiopoietin-like 6 3.1509
MSANTD1 Myb/SANT-like DNA-binding domain containing 1 3.1509
PPP1R3A protein phosphatase 1, regulatory subunit 3A 3.1509
CIB4 calcium and integrin binding family member 4 3.1509
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 3.1509
NEUROD4 neuronal differentiation 4 3.1509
CSF3R colony stimulating factor 3 receptor (granulocyte) 3.1509
PTGDS prostaglandin D2 synthase 21kDa (brain) 3.1509
AMPD1 adenosine monophosphate deaminase 1 3.1509
SLC22A7 solute carrier family 22 (organic anion transporter), member 7 3.1509
IRX5 iroquois homeobox 5 3.1509
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group) 3.1509
GPD1 glycerol-3-phosphate dehydrogenase 1 (soluble) 3.1509
PSMA8 proteasome (prosome, macropain) subunit, alpha type, 8 3.1509
MCOLN3 mucolipin 3 3.04431
RPS21-DT RPS21 divergent transcript 3.04431
MR1 major histocompatibility complex, class I-related 3.0018
EXOC2 exocyst complex component 2 2.94858
FMO4 flavin containing monooxygenase 4 2.80672
STXBP3 syntaxin binding protein 3 2.7768
EP400 E1A binding protein p400 2.77645
TXNDC15 thioredoxin domain containing 15 2.77645
SLC8A2 solute carrier family 8 (sodium/calcium exchanger), member 2 2.70875
ZBTB41 zinc finger and BTB domain containing 41 2.65649
CRTC1 CREB regulated transcription coactivator 1 2.48686
NOAZFP nucleolar atypical zinc finger 2.48686
FBXW10B F-box and WD repeat domain containing 10B 2.45913
PLAGL1 pleiomorphic adenoma gene-like 1 2.39318
OR2AG2 olfactory receptor, family 2, subfamily AG, member 2 2.38754
PRDM7 PR domain containing 7 2.38754
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 2.38754
HS3ST2 heparan sulfate (glucosamine) 3-O-sulfotransferase 2 2.38039
NCBP2 nuclear cap binding protein subunit 2, 20kDa 2.36639
DUSP9 dual specificity phosphatase 9 2.36053
RNF180 ring finger protein 180 2.35996
NXPH1 neurexophilin 1 2.33125
REEP1 receptor accessory protein 1 2.32277
IZUMO2 IZUMO family member 2 2.22634
CHRNA9 cholinergic receptor, nicotinic, alpha 9 (neuronal) 2.21812
GNGT2 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 2.21812
RAB37 RAB37, member RAS oncogene family 2.20803
BCL3 B-cell CLL/lymphoma 3 2.20308
PROSER1 proline and serine rich 1 2.18944
NFKBIB nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta 2.15724
SENP6 SUMO1/sentrin specific peptidase 6 2.14145
GANAB glucosidase, alpha; neutral AB 2.1327
POLI polymerase (DNA directed) iota 2.12292
UNKL unkempt family zinc finger-like 2.11328
SLC52A1 solute carrier family 52 (riboflavin transporter), member 1 2.10949
FBXO10 F-box protein 10 2.10811
UGDH UDP-glucose 6-dehydrogenase 2.08251
H2AC13 H2A clustered histone 13 2.07733
SLC15A5 solute carrier family 15, member 5 2.07733
DPH3 diphthamide biosynthesis 3 2.07733
TENT5D terminal nucleotidyltransferase 5D 2.07733
ANKRD53 ankyrin repeat domain 53 2.07733
SHC4 SHC (Src homology 2 domain containing) family, member 4 2.07733
CLIC5 chloride intracellular channel 5 2.07733
PPP1R3C protein phosphatase 1, regulatory subunit 3C 2.07733
WDR35 WD repeat domain 35 2.0727
DUSP22 dual specificity phosphatase 22 2.0727
GREB1 growth regulation by estrogen in breast cancer 1 2.07242
SUGP1 SURP and G patch domain containing 1 2.06728
EEF1AKMT4 EEF1A lysine methyltransferase 4 2.05675
USP40 ubiquitin specific peptidase 40 2.0556
MXD3 MAX dimerization protein 3 2.04397
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C) 2.02381
RAB7A RAB7A, member RAS oncogene family 2.00718

decreased expression

Symbol Name Standardized Value
KYNU kynureninase -3.15532
SULT1C2 sulfotransferase family, cytosolic, 1C, member 2 -3.15532
BHLHE40 basic helix-loop-helix family, member e40 -3.1509
PTGER3 prostaglandin E receptor 3 (subtype EP3) -3.1509
PCDH8 protocadherin 8 -3.1509
SNRK SNF related kinase -3.1509
STING1 stimulator of interferon response cGAMP interactor 1 -3.1509
PSORS1C1 psoriasis susceptibility 1 candidate 1 -3.1509
PSORS1C2 psoriasis susceptibility 1 candidate 2 -3.1509
PSCA prostate stem cell antigen -3.1509
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) -3.1509
IL1R1 interleukin 1 receptor, type I -3.1509
CLCNKA chloride channel, voltage-sensitive Ka -3.1509
C9ORF43 chromosome 9 open reading frame 43 -3.1509
ADAM21 ADAM metallopeptidase domain 21 -3.1509
OIT3 oncoprotein induced transcript 3 -3.1509
NMUR2 neuromedin U receptor 2 -3.1509
RAB36 RAB36, member RAS oncogene family -3.1509
ARHGAP15 Rho GTPase activating protein 15 -3.1509
H4C12 H4 clustered histone 12 -3.1509
CELF6 CUGBP, Elav-like family member 6 -3.1509
C10ORF105 chromosome 10 open reading frame 105 -3.1509
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 -3.1509
FCRLB Fc receptor-like B -3.1509
CCDC178 coiled-coil domain containing 178 -3.1509
SH2D6 SH2 domain containing 6 -3.1509
TMEM225B transmembrane protein 225B -3.1509
ZNF843 zinc finger protein 843 -3.1509
PCDHA5 protocadherin alpha 5 -3.1509
RTL5 retrotransposon Gag like 5 -3.1509
EDN1 endothelin 1 -3.1509
UCP3 uncoupling protein 3 (mitochondrial, proton carrier) -3.1509
TNFSF13 tumor necrosis factor (ligand) superfamily, member 13 -3.1509
XK X-linked Kx blood group -3.1509
ASB14 ankyrin repeat and SOCS box containing 14 -3.1509
CSPP1 centrosome and spindle pole associated protein 1 -3.0359
ATOSB atos homolog B -3.0359
AEN apoptosis enhancing nuclease -3.03115
NCKAP5 NCK-associated protein 5 -2.99146
BARD1 BRCA1 associated RING domain 1 -2.98496
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4 -2.66862
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -2.65908
ABHD13 abhydrolase domain containing 13 -2.63449
SDC3 syndecan 3 -2.62976
MRPL19 mitochondrial ribosomal protein L19 -2.61773
PROKR2 prokineticin receptor 2 -2.60886
F8A1 coagulation factor VIII-associated 1 -2.60868
ARID5A AT rich interactive domain 5A (MRF1-like) -2.56332
ZNF365 zinc finger protein 365 -2.56332
TNFSF9 tumor necrosis factor (ligand) superfamily, member 9 -2.56332
TADA2B transcriptional adaptor 2B -2.48686
CPM carboxypeptidase M -2.48023
HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 -2.45913
ENO2 enolase 2 (gamma, neuronal) -2.4563
ZNF771 zinc finger protein 771 -2.42298
FAXC failed axon connections homolog (Drosophila) -2.38754
DNAAF8 dynein axonemal assembly factor 8 -2.38408
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -2.38408
PDGFD platelet derived growth factor D -2.37792
PIGL phosphatidylinositol glycan anchor biosynthesis, class L -2.37792
PCBD2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 -2.37792
ZBTB42 zinc finger and BTB domain containing 42 -2.36053
DCST1 DC-STAMP domain containing 1 -2.36053
PMPCA peptidase (mitochondrial processing) alpha -2.35576
ODAD3 outer dynein arm docking complex subunit 3 -2.34371
ANKRD31 ankyrin repeat domain 31 -2.29443
ACTG2 actin, gamma 2, smooth muscle, enteric -2.29443
BASP1 brain abundant, membrane attached signal protein 1 -2.29238
TNNC2 troponin C type 2 (fast) -2.27149
NOD2 nucleotide-binding oligomerization domain containing 2 -2.26928
TMEM81 transmembrane protein 81 -2.26928
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -2.25881
CHD9 chromodomain helicase DNA binding protein 9 -2.25094
HDX highly divergent homeobox -2.23872
AASS aminoadipate-semialdehyde synthase -2.23782
SPTBN1 spectrin, beta, non-erythrocytic 1 -2.23782
TLL2 tolloid-like 2 -2.22926
KTN1 kinectin 1 (kinesin receptor) -2.22284
GIP gastric inhibitory polypeptide -2.20697
RORC RAR-related orphan receptor C -2.20697
GPR171 G protein-coupled receptor 171 -2.20697
CKS1B CDC28 protein kinase regulatory subunit 1B -2.20402
ZPR1 ZPR1 zinc finger -2.20308
BORCS5 BLOC-1 related complex subunit 5 -2.19893
CHD1L chromodomain helicase DNA binding protein 1-like -2.19574
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa -2.18944
PLPPR2 phospholipid phosphatase related 2 -2.18944
ANO6 anoctamin 6 -2.16735
PGLYRP1 peptidoglycan recognition protein 1 -2.1546
FLVCR1 feline leukemia virus subgroup C cellular receptor 1 -2.14243
MED9 mediator complex subunit 9 -2.14214
TBL1X transducin (beta)-like 1X-linked -2.14145
UBE2H ubiquitin-conjugating enzyme E2H -2.12995
FAM149B1 family with sequence similarity 149, member B1 -2.12685
MGRN1 mahogunin ring finger 1, E3 ubiquitin protein ligase -2.12481
KIF24 kinesin family member 24 -2.12456
IRAG1 inositol 1,4,5-triphosphate receptor associated 1 -2.12292
RMDN3 regulator of microtubule dynamics 3 -2.1201
TRAPPC3 trafficking protein particle complex 3 -2.10949
DNAJC27 DnaJ (Hsp40) homolog, subfamily C, member 27 -2.10949
SEC16A SEC16 homolog A (S. cerevisiae) -2.10949
PAM16 presequence translocase-associated motor 16 homolog (S. cerevisiae) -2.09105
RTN3 reticulon 3 -2.07733
ZNF880 zinc finger protein 880 -2.0727
DENND3 DENN/MADD domain containing 3 -2.0727
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 -2.06151
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 -2.05627
SLC12A9 solute carrier family 12, member 9 -2.0556
RC3H2 ring finger and CCCH-type domains 2 -2.0556
ZNF280B zinc finger protein 280B -2.04397
BZW1 basic leucine zipper and W2 domains 1 -2.0398
SLC2A14 solute carrier family 2 (facilitated glucose transporter), member 14 -2.03783
PTPRN protein tyrosine phosphatase, receptor type, N -2.03783
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae) -2.03783
RBM8A RNA binding motif protein 8A -2.02651
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa -2.01914
ERBIN erbb2 interacting protein -2.00516