MS-1 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Small Cell Lung Carcinoma Tumour (Cell Model Passports, SIDM00245)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00245
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Genes

194 proteins associated with the cell line MS-1 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACTL8 actin-like 8
ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif, 2
AFG3L2 AFG3-like AAA ATPase 2
AK6 adenylate kinase 6
AKAP1 A kinase (PRKA) anchor protein 1
AMPD2 adenosine monophosphate deaminase 2
APOO apolipoprotein O
ASPSCR1 alveolar soft part sarcoma chromosome region, candidate 1
ASS1 argininosuccinate synthase 1
ATAD3A ATPase family, AAA domain containing 3A
BLMH bleomycin hydrolase
BUB3 BUB3 mitotic checkpoint protein
C9ORF40 chromosome 9 open reading frame 40
CHAF1B chromatin assembly factor 1, subunit B (p60)
CISD1 CDGSH iron sulfur domain 1
CKB creatine kinase, brain
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit
CLUH clustered mitochondria (cluA/CLU1) homolog
CMSS1 cms1 ribosomal small subunit homolog (yeast)
COA7 cytochrome c oxidase assembly factor 7 (putative)
COIL coilin
COQ9 coenzyme Q9
DCUN1D5 DCN1, defective in cullin neddylation 1, domain containing 5
DESI1 desumoylating isopeptidase 1
DHX33 DEAH (Asp-Glu-Ala-His) box polypeptide 33
DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11
DNM3 dynamin 3
EIF2B3 eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa
ELAVL2 ELAV like neuron-specific RNA binding protein 2
ERI3 ERI1 exoribonuclease family member 3
FXR2 fragile X mental retardation, autosomal homolog 2
GAMT guanidinoacetate N-methyltransferase
GCLM glutamate-cysteine ligase, modifier subunit
GDI1 GDP dissociation inhibitor 1
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1
GOT1 glutamic-oxaloacetic transaminase 1, soluble
GPSM1 G-protein signaling modulator 1
GRPEL2 GrpE-like 2, mitochondrial (E. coli)
HMGN3-AS1 HMGN3 antisense RNA 1
HPDL 4-hydroxyphenylpyruvate dioxygenase-like
HSD17B10 hydroxysteroid (17-beta) dehydrogenase 10
IRS2 insulin receptor substrate 2
ITPA inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
KAT7 K(lysine) acetyltransferase 7
KHK ketohexokinase (fructokinase)
KIF16B kinesin family member 16B
KIF4A kinesin family member 4A
KNSTRN kinetochore-localized astrin/SPAG5 binding protein
KPNA6 karyopherin alpha 6 (importin alpha 7)
KPNB1 karyopherin (importin) beta 1
LOC100653005
LRRC47 leucine rich repeat containing 47
MESTP1 mesoderm specific transcript pseudogene 1
MYL6B myosin, light chain 6B, alkali, smooth muscle and non-muscle
NDUFAF4 NADH dehydrogenase (ubiquinone) complex I, assembly factor 4
NECTIN3 nectin cell adhesion molecule 3
NFIA nuclear factor I/A
NFIX nuclear factor I/X (CCAAT-binding transcription factor)
NLE1 notchless homolog 1 (Drosophila)
PFKM phosphofructokinase, muscle
PGK2 phosphoglycerate kinase 2
PITHD1 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme
PPP2R1B protein phosphatase 2, regulatory subunit A, beta
PQBP1 polyglutamine binding protein 1
PRMT5 protein arginine methyltransferase 5
PRPF38A pre-mRNA processing factor 38A
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
RCCD1 RCC1 domain containing 1
REPIN1 replication initiator 1
RRM1 ribonucleotide reductase M1
SARM1 sterile alpha and TIR motif containing 1
SKI SKI proto-oncogene
SLC25A19 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
SLC25A22 solute carrier family 25 (mitochondrial carrier: glutamate), member 22
SNCB synuclein, beta
SORD sorbitol dehydrogenase
SRRT serrate, RNA effector molecule
SRSF11 serine/arginine-rich splicing factor 11
SSRP1 structure specific recognition protein 1
STXBP1 syntaxin binding protein 1
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae)
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae)
TIMM44 translocase of inner mitochondrial membrane 44 homolog (yeast)
TNPO1 transportin 1
TRIM72 tripartite motif containing 72, E3 ubiquitin protein ligase
TRMT1 tRNA methyltransferase 1 homolog (S. cerevisiae)
TTLL12 tubulin tyrosine ligase-like family member 12
TXLNA taxilin alpha
UBE2T ubiquitin-conjugating enzyme E2T
UBTF upstream binding transcription factor, RNA polymerase I
USP13 ubiquitin specific peptidase 13 (isopeptidase T-3)
VARS2 valyl-tRNA synthetase 2, mitochondrial
VTN vitronectin
WDR77 WD repeat domain 77
XYLT2 xylosyltransferase II

Symbol Name
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5
ACAP1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
ACSL5 acyl-CoA synthetase long-chain family member 5
ACSS1 acyl-CoA synthetase short-chain family member 1
ACTR6 ARP6 actin-related protein 6 homolog (yeast)
ADAM17 ADAM metallopeptidase domain 17
AHSG alpha-2-HS-glycoprotein
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
AP2A1 adaptor-related protein complex 2, alpha 1 subunit
ATF7IP activating transcription factor 7 interacting protein
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide
BNC1 basonuclin 1
C1ORF116 chromosome 1 open reading frame 116
CANT1 calcium activated nucleotidase 1
CASP2 caspase 2, apoptosis-related cysteine peptidase
CDK17 cyclin-dependent kinase 17
CDS2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
COG1 component of oligomeric golgi complex 1
CSPG4 chondroitin sulfate proteoglycan 4
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1
CXCR4 chemokine (C-X-C motif) receptor 4
DDX19A DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A
DOCK9 dedicator of cytokinesis 9
DSG2 desmoglein 2
EDN3 endothelin 3
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1
EPN1 epsin 1
FAH fumarylacetoacetate hydrolase (fumarylacetoacetase)
FNDC3B fibronectin type III domain containing 3B
FRA1D fragile site, aphidicolin type, common, fra(1)(p22)
GCC2 GRIP and coiled-coil domain containing 2
GID8 GID complex subunit 8
GLUL glutamate-ammonia ligase
GOLGB1 golgin B1
HMG20B high mobility group 20B
HMGN4 high mobility group nucleosomal binding domain 4
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1
HPCAL1 hippocalcin-like 1
IKZF3 IKAROS family zinc finger 3 (Aiolos)
ISOC2 isochorismatase domain containing 2
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3
LAMP2 lysosomal-associated membrane protein 2
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LASP1 LIM and SH3 protein 1
LENG1 leukocyte receptor cluster (LRC) member 1
LOC105371966 uncharacterized LOC105371966
MCFD2 multiple coagulation factor deficiency 2
MED27 mediator complex subunit 27
MGAT1 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MGAT4B mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
MGLL monoglyceride lipase
MTRF1 mitochondrial translational release factor 1
NFIC nuclear factor I/C (CCAAT-binding transcription factor)
NLRP1 NLR family, pyrin domain containing 1
NMT2 N-myristoyltransferase 2
PAH phenylalanine hydroxylase
PARP2 poly (ADP-ribose) polymerase 2
PKMYT1 protein kinase, membrane associated tyrosine/threonine 1
PLEKHF1 pleckstrin homology domain containing, family F (with FYVE domain) member 1
PLSCR3 phospholipid scramblase 3
PRKCA protein kinase C, alpha
PTPRK protein tyrosine phosphatase, receptor type, K
PXK PX domain containing serine/threonine kinase
RAB5B RAB5B, member RAS oncogene family
RABAC1 Rab acceptor 1 (prenylated)
RAI1 retinoic acid induced 1
RASIP1 Ras interacting protein 1
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2
RBM15B RNA binding motif protein 15B
RBM4B RNA binding motif protein 4B
RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
RSBN1L round spermatid basic protein 1-like
SCEL sciellin
SCUBE1 signal peptide, CUB domain, EGF-like 1
SEL1L sel-1 suppressor of lin-12-like (C. elegans)
SERF2 small EDRK-rich factor 2
SETDB1 SET domain, bifurcated 1
SIRT5 sirtuin 5
SLC39A11 solute carrier family 39, member 11
SLC39A14 solute carrier family 39 (zinc transporter), member 14
SLC6A16 solute carrier family 6, member 16
SPRYD7 SPRY domain containing 7
SPTB spectrin, beta, erythrocytic
SPTLC1 serine palmitoyltransferase, long chain base subunit 1
SRCAP Snf2-related CREBBP activator protein
SS18L2 synovial sarcoma translocation gene on chromosome 18-like 2
STX8 syntaxin 8
SWAP70 SWAP switching B-cell complex 70kDa subunit
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
TMEM179B transmembrane protein 179B
TRADD TNFRSF1A-associated via death domain
TRIM44 tripartite motif containing 44
UIMC1 ubiquitin interaction motif containing 1
UNC119B unc-119 homolog B (C. elegans)
USP28 ubiquitin specific peptidase 28
ZDHHC5 zinc finger, DHHC-type containing 5