Malotilate_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Malotilate perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Malotilate_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.112217
NDRG1 N-myc downstream regulated 1 0.103507
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0999345
AKAP12 A kinase (PRKA) anchor protein 12 0.0945784
MT2A metallothionein 2A 0.0926951
VIM vimentin 0.083737
VEGFA vascular endothelial growth factor A 0.0733565
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0689439
NAMPT nicotinamide phosphoribosyltransferase 0.0652269
FLNB filamin B, beta 0.0610993
HLA-B major histocompatibility complex, class I, B 0.0581158
SDK1 sidekick cell adhesion molecule 1 0.0541049
CD44 CD44 molecule (Indian blood group) 0.0490461
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0433867
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0419492
EGFR epidermal growth factor receptor 0.0402271
PRRC2C proline-rich coiled-coil 2C 0.0395456
SEPTIN9 septin 9 0.0394403
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.0391939
FMNL2 formin-like 2 0.0385138
C3 complement component 3 0.0377812
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0377298
ZFP36L1 ZFP36 ring finger protein-like 1 0.0373726
UBA6 ubiquitin-like modifier activating enzyme 6 0.0370939
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0370134
ERRFI1 ERBB receptor feedback inhibitor 1 0.0369206
ZMYND8 zinc finger, MYND-type containing 8 0.034817
STC1 stanniocalcin 1 0.0343524
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0343085
ARRDC3 arrestin domain containing 3 0.0339433
DLG1 discs, large homolog 1 (Drosophila) 0.0334744
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0334467
MCL1 myeloid cell leukemia 1 0.0333513
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0327287
HDAC9 histone deacetylase 9 0.0325726
UGCG UDP-glucose ceramide glucosyltransferase 0.032403
GPC6 glypican 6 0.0315372
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0310915
CDK19 cyclin-dependent kinase 19 0.0310757
IRAK2 interleukin-1 receptor-associated kinase 2 0.0305338
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0304489
FRMPD4 FERM and PDZ domain containing 4 0.0301157
FLOT1 flotillin 1 0.030059
HLA-A major histocompatibility complex, class I, A 0.0300276
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0300035
CLIP2 CAP-GLY domain containing linker protein 2 0.029642
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0296174
RPL9 ribosomal protein L9 0.0294083
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0291858
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0289773
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0274869
BTG1 B-cell translocation gene 1, anti-proliferative 0.0274248
RND3 Rho family GTPase 3 0.0272408
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0271874
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0269991
GOLGA4 golgin A4 0.0269736
B2M beta-2-microglobulin 0.0269256
PHF21A PHD finger protein 21A 0.0268287
MYO10 myosin X 0.026483
HMGA2 high mobility group AT-hook 2 0.0263882
RPS4X ribosomal protein S4, X-linked 0.0261659
PDE10A phosphodiesterase 10A 0.025939
DOCK5 dedicator of cytokinesis 5 0.0258983
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0258315
KDM2A lysine (K)-specific demethylase 2A 0.0257875
IFITM1 interferon induced transmembrane protein 1 0.0256387
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.025635
ZHX2 zinc fingers and homeoboxes 2 0.0252813
IFITM3 interferon induced transmembrane protein 3 0.0252034
TGM2 transglutaminase 2 0.0251346
RNF24 ring finger protein 24 0.0248415
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0247066
IGFBP7 insulin-like growth factor binding protein 7 0.0244928
INHBA inhibin, beta A 0.0244203
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0242563
INSR insulin receptor 0.0239451
FBXO32 F-box protein 32 0.0239386
AKAP9 A kinase (PRKA) anchor protein 9 0.0239062
DHRSX dehydrogenase/reductase (SDR family) X-linked 0.023561
FRMD4A FERM domain containing 4A 0.0230566
IFI6 interferon, alpha-inducible protein 6 0.0230308
JMJD1C jumonji domain containing 1C 0.0228709
SLC39A11 solute carrier family 39, member 11 0.0228156
BASP1 brain abundant, membrane attached signal protein 1 0.0227709
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0226273
PLIN2 perilipin 2 0.0223269
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 0.0222584
RUNX1 runt-related transcription factor 1 0.0221601
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0220783
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0220055
BNC2 basonuclin 2 0.0219276
NOTCH2 notch 2 0.0218809
DUSP5 dual specificity phosphatase 5 0.0217225
BPTF bromodomain PHD finger transcription factor 0.0216974
EFNA5 ephrin-A5 0.0216066
MAML2 mastermind-like 2 (Drosophila) 0.0214867
MSN moesin 0.0210744
CCNL1 cyclin L1 0.0209918
MMP12 matrix metallopeptidase 12 0.0208655
PDE4D phosphodiesterase 4D, cAMP-specific 0.0208628

decreased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle -0.171752
FN1 fibronectin 1 -0.154163
SOD2 superoxide dismutase 2, mitochondrial -0.141969
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.103765
IER3 immediate early response 3 -0.0939057
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0930689
TPT1 tumor protein, translationally-controlled 1 -0.0874902
PGK1 phosphoglycerate kinase 1 -0.0851565
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.07986
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0732191
KDM3A lysine (K)-specific demethylase 3A -0.0664742
THBS1 thrombospondin 1 -0.0640782
ANXA2 annexin A2 -0.0629646
VCL vinculin -0.0626254
RPS24 ribosomal protein S24 -0.0615835
OGA O-GlcNAcase -0.0600821
EEF2 eukaryotic translation elongation factor 2 -0.0564131
AHNAK AHNAK nucleoprotein -0.0526268
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0521225
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0514411
BICC1 BicC family RNA binding protein 1 -0.0511975
TPM4 tropomyosin 4 -0.0483652
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0478999
ACTG1 actin gamma 1 -0.047638
FLNA filamin A, alpha -0.0464682
ZFAND3 zinc finger, AN1-type domain 3 -0.0448974
SPAG9 sperm associated antigen 9 -0.0444017
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0432764
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0431879
RRBP1 ribosome binding protein 1 -0.0421511
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0415334
POTEF POTE ankyrin domain family, member F -0.0413156
RPLP0 ribosomal protein, large, P0 -0.040538
DEK DEK proto-oncogene -0.0404783
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0387191
RBM39 RNA binding motif protein 39 -0.0363496
TXNRD1 thioredoxin reductase 1 -0.0362105
SMAD3 SMAD family member 3 -0.0360338
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0357775
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0354785
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.035079
EXT1 exostosin glycosyltransferase 1 -0.0349785
ANLN anillin, actin binding protein -0.0340364
CAVIN1 caveolae associated protein 1 -0.0340235
COL6A3 collagen, type VI, alpha 3 -0.0338836
THBS2 thrombospondin 2 -0.0333753
RHOA ras homolog family member A -0.0332219
TUBB tubulin, beta class I -0.0331942
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa -0.0331397
QKI QKI, KH domain containing, RNA binding -0.0331322
HLA-C major histocompatibility complex, class I, C -0.0330377
CD164 CD164 molecule, sialomucin -0.0328448
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0323845
NAP1L1 nucleosome assembly protein 1-like 1 -0.0322534
ARF1 ADP-ribosylation factor 1 -0.0322095
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0316635
RPL4 ribosomal protein L4 -0.0316502
HLA-E major histocompatibility complex, class I, E -0.0315188
CANX calnexin -0.0313811
GNAS GNAS complex locus -0.0312882
LAMP2 lysosomal-associated membrane protein 2 -0.0312045
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0309266
RTN4 reticulon 4 -0.0304111
TSC22D2 TSC22 domain family, member 2 -0.0302343
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0302172
COL1A1 collagen, type I, alpha 1 -0.0298559
CENPF centromere protein F, 350/400kDa -0.0293601
FSTL1 follistatin-like 1 -0.0290114
EEF1G eukaryotic translation elongation factor 1 gamma -0.0285957
MAP1B microtubule-associated protein 1B -0.0282989
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0282324
MKI67 marker of proliferation Ki-67 -0.0279248
SFRP1 secreted frizzled-related protein 1 -0.0277468
TMEM123 transmembrane protein 123 -0.0274115
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0273367
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0270171
GLIPR1 GLI pathogenesis-related 1 -0.0270143
RAD21 RAD21 homolog (S. pombe) -0.0269874
HDLBP high density lipoprotein binding protein -0.0266718
TRIO trio Rho guanine nucleotide exchange factor -0.0266297
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0264326
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0262659
IARS1 isoleucyl-tRNA synthetase 1 -0.0261645
CALR calreticulin -0.026158
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0261168
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0260999
FAM20C family with sequence similarity 20, member C -0.0259094
LCORL ligand dependent nuclear receptor corepressor-like -0.0258983
SRGN serglycin -0.0258973
SMC4 structural maintenance of chromosomes 4 -0.0258362
TMEM263 transmembrane protein 263 -0.0255449
MARCHF6 membrane associated ring-CH-type finger 6 -0.0254985
HMGB2 high mobility group box 2 -0.0253639
HBP1 HMG-box transcription factor 1 -0.0253575
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.025318
IPO7 importin 7 -0.0250234
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked -0.0241933
CD63 CD63 molecule -0.0240133
NUP153 nucleoporin 153kDa -0.0238393
TNNC1 troponin C type 1 (slow) -0.0238213