Mebendazole_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mebendazole perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mebendazole_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ACTG1 actin gamma 1 0.154542
AREG amphiregulin 0.144382
PTMA prothymosin, alpha 0.107251
TMSB10 thymosin beta 10 0.0992407
EEF2 eukaryotic translation elongation factor 2 0.0848162
MKI67 marker of proliferation Ki-67 0.0679135
CALR calreticulin 0.0653998
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0642224
CCN2 cellular communication network factor 2 0.0621018
HSPA8 heat shock 70kDa protein 8 0.0592554
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0592205
FTH1 ferritin, heavy polypeptide 1 0.0565809
TPT1 tumor protein, translationally-controlled 1 0.0548858
TM4SF1 transmembrane 4 L six family member 1 0.0534805
RPS3 ribosomal protein S3 0.0490944
RPL7A ribosomal protein L7a 0.0483705
RPL23 ribosomal protein L23 0.047128
RPL37A ribosomal protein L37a 0.047022
RPL35A ribosomal protein L35a 0.0458971
NCAPD2 non-SMC condensin I complex, subunit D2 0.0437542
RRM2 ribonucleotide reductase M2 0.0435996
RPL19 ribosomal protein L19 0.0427785
RPS27A ribosomal protein S27a 0.040527
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0396224
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0377694
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0372286
MACF1 microtubule-actin crosslinking factor 1 0.0365967
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0364452
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0352393
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0346004
RPL9 ribosomal protein L9 0.0345362
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0339151
RPL38 ribosomal protein L38 0.033589
EIF4B eukaryotic translation initiation factor 4B 0.033238
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0326256
RPL13A ribosomal protein L13a 0.0322701
RPS29 ribosomal protein S29 0.0319488
MARCHF4 membrane associated ring-CH-type finger 4 0.0318846
EHBP1L1 EH domain binding protein 1-like 1 0.030771
RPL4 ribosomal protein L4 0.0306584
ANKRD12 ankyrin repeat domain 12 0.030015
RPL26 ribosomal protein L26 0.0299603
RPL3 ribosomal protein L3 0.0296593
SRRM2 serine/arginine repetitive matrix 2 0.0294242
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0291806
ASPH aspartate beta-hydroxylase 0.0283064
EZR ezrin 0.0280619
AKAP12 A kinase (PRKA) anchor protein 12 0.0278632
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0275468
EIF4H eukaryotic translation initiation factor 4H 0.0275131
NFE2L1 nuclear factor, erythroid 2-like 1 0.0272718
NACA nascent polypeptide-associated complex alpha subunit 0.0269115
PRDX1 peroxiredoxin 1 0.0265741
PDCD5 programmed cell death 5 0.0262737
FGFR1 fibroblast growth factor receptor 1 0.0262119
FLNA filamin A, alpha 0.0256798
RPL37 ribosomal protein L37 0.0256071
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0252127
CACYBP calcyclin binding protein 0.0249219
CAVIN1 caveolae associated protein 1 0.0245554
MAGEA4 melanoma antigen family A4 0.0245342
FUS FUS RNA binding protein 0.0242758
EEF1G eukaryotic translation elongation factor 1 gamma 0.024132
RPS19 ribosomal protein S19 0.0239258
SPAG5 sperm associated antigen 5 0.0235109
RPS17 ribosomal protein S17 0.0233583
THRAP3 thyroid hormone receptor associated protein 3 0.0230221
YBX1 Y box binding protein 1 0.0223504
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 0.0220323
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 0.0220225
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 0.0220171
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0213383
DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha) 0.0210772
NME2 NME/NM23 nucleoside diphosphate kinase 2 0.0210467
YBX3 Y box binding protein 3 0.020695
MYH9 myosin, heavy chain 9, non-muscle 0.0205633
MAPRE1 microtubule-associated protein, RP/EB family, member 1 0.0205567
MTCL1 microtubule crosslinking factor 1 0.0203247
STIP1 stress-induced phosphoprotein 1 0.0202603
BIRC3 baculoviral IAP repeat containing 3 0.0201066
RPS23 ribosomal protein S23 0.0200851
EIF5B eukaryotic translation initiation factor 5B 0.0199566
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.019844
CEP250 centrosomal protein 250kDa 0.0198353
CHD4 chromodomain helicase DNA binding protein 4 0.0197686
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0197556
CMIP c-Maf inducing protein 0.0197015
BRD8 bromodomain containing 8 0.0194756
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0194364
HLA-B major histocompatibility complex, class I, B 0.0194207
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.019367
RPS7 ribosomal protein S7 0.0192839
RPL31 ribosomal protein L31 0.0191546
ZC3H13 zinc finger CCCH-type containing 13 0.0189609
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0188548
RPLP1 ribosomal protein, large, P1 0.0186077
DENND5A DENN/MADD domain containing 5A 0.0185804
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0184348
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0182445
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0181156

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.165181
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.15623
MMP12 matrix metallopeptidase 12 -0.115887
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.108341
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.10337
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.100029
NLGN1 neuroligin 1 -0.0949907
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0931612
USP34 ubiquitin specific peptidase 34 -0.0914393
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0826
PFN1 profilin 1 -0.0802311
VIM vimentin -0.0772302
VMP1 vacuole membrane protein 1 -0.0766305
TENM3 teneurin transmembrane protein 3 -0.0734961
DST dystonin -0.0646892
JMJD1C jumonji domain containing 1C -0.0633346
XPO1 exportin 1 -0.0630177
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0612219
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0606614
BIRC6 baculoviral IAP repeat containing 6 -0.0595899
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0569273
NF1 neurofibromin 1 -0.0541146
TMEM123 transmembrane protein 123 -0.0536963
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.053632
TUBA1B tubulin, alpha 1b -0.0529641
PDE4D phosphodiesterase 4D, cAMP-specific -0.0522569
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0517031
PCBP2 poly(rC) binding protein 2 -0.0511613
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.05115
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0509645
TBC1D5 TBC1 domain family, member 5 -0.0508515
CARD16 caspase recruitment domain family, member 16 -0.0491789
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0488988
ZNF292 zinc finger protein 292 -0.0479123
RPLP0 ribosomal protein, large, P0 -0.0464554
IL6ST interleukin 6 signal transducer -0.0458703
HMGA1 high mobility group AT-hook 1 -0.0457695
FNDC3B fibronectin type III domain containing 3B -0.0453915
CXADR coxsackie virus and adenovirus receptor -0.045084
TPI1 triosephosphate isomerase 1 -0.0448545
MGAT4C MGAT4 family, member C -0.0431052
SLC38A2 solute carrier family 38, member 2 -0.0423808
MED13L mediator complex subunit 13-like -0.0422159
YAP1 Yes-associated protein 1 -0.0419757
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0414092
ZNF207 zinc finger protein 207 -0.0413893
NAP1L1 nucleosome assembly protein 1-like 1 -0.0411334
TXNRD1 thioredoxin reductase 1 -0.0406424
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0396103
EPHA6 EPH receptor A6 -0.0395806
RTN3 reticulon 3 -0.0393542
ZBTB20 zinc finger and BTB domain containing 20 -0.0388967
MBNL1 muscleblind-like splicing regulator 1 -0.0387389
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.038597
CELF2 CUGBP, Elav-like family member 2 -0.0381283
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0376595
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0371512
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0370366
CDK6 cyclin-dependent kinase 6 -0.0368584
RAD51B RAD51 paralog B -0.036656
SYT1 synaptotagmin I -0.0366287
ADGRG6 adhesion G protein-coupled receptor G6 -0.0364786
ERBIN erbb2 interacting protein -0.0364137
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0362157
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0356969
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0352905
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0347565
PCNP PEST proteolytic signal containing nuclear protein -0.0346867
H1-0 H1.0 linker histone -0.0344736
ARL15 ADP-ribosylation factor-like 15 -0.0343792
HSPB1 heat shock 27kDa protein 1 -0.0342511
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0341545
PDK4 pyruvate dehydrogenase kinase, isozyme 4 -0.0339851
SETD5 SET domain containing 5 -0.0337342
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0334501
NEK7 NIMA-related kinase 7 -0.0334359
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0332785
KLHL24 kelch-like family member 24 -0.0325934
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0320242
DTNA dystrobrevin, alpha -0.0320156
TAS2R14 taste receptor, type 2, member 14 -0.0315512
DDIT3 DNA-damage-inducible transcript 3 -0.031542
NEBL nebulette -0.0313035
PUM2 pumilio RNA-binding family member 2 -0.0312457
NKTR natural killer cell triggering receptor -0.0312084
ELP4 elongator acetyltransferase complex subunit 4 -0.0303475
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0301253
TFG TRK-fused gene -0.0298812
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0293343
USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) -0.0293119
PICALM phosphatidylinositol binding clathrin assembly protein -0.0291974
CAMKMT calmodulin-lysine N-methyltransferase -0.02907
PDIA6 protein disulfide isomerase family A, member 6 -0.0289887
KMT2E lysine (K)-specific methyltransferase 2E -0.0288027
BCAS3 breast carcinoma amplified sequence 3 -0.028636
CCND1 cyclin D1 -0.0286214
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0284608
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha -0.0284019
SKIL SKI-like proto-oncogene -0.0283862
AFF4 AF4/FMR2 family, member 4 -0.028379