Mebendazole_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mebendazole perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mebendazole_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.315108
PTMA prothymosin, alpha 0.29304
TMSB4X thymosin beta 4, X-linked 0.218724
TMSB10 thymosin beta 10 0.120331
EEF2 eukaryotic translation elongation factor 2 0.116014
ACTG1 actin gamma 1 0.103784
CALR calreticulin 0.095863
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0706938
MKI67 marker of proliferation Ki-67 0.0605966
RAI1 retinoic acid induced 1 0.0597518
CENPF centromere protein F, 350/400kDa 0.0547606
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0540244
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0533759
SRRM2 serine/arginine repetitive matrix 2 0.0513725
RPL7A ribosomal protein L7a 0.0504309
RPL23 ribosomal protein L23 0.0492467
CAPRIN2 caprin family member 2 0.0481298
EZR ezrin 0.0462067
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0443282
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0425099
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0421921
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0410704
YBX1 Y box binding protein 1 0.0407425
AHNAK AHNAK nucleoprotein 0.0400953
MYH9 myosin, heavy chain 9, non-muscle 0.0399696
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0397696
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0388258
MT2A metallothionein 2A 0.0381425
LOXL2 lysyl oxidase-like 2 0.036434
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0361546
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0356926
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0352089
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0342807
ENO2 enolase 2 (gamma, neuronal) 0.0332452
IGFBP6 insulin-like growth factor binding protein 6 0.033015
ANKRD12 ankyrin repeat domain 12 0.0322726
RBM25 RNA binding motif protein 25 0.0313954
RPL3 ribosomal protein L3 0.0309595
SMAD3 SMAD family member 3 0.0305581
DDIT4 DNA-damage-inducible transcript 4 0.0303895
GARS1 glycyl-tRNA synthetase 1 0.0301163
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.029906
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0296704
FNIP1 folliculin interacting protein 1 0.0291179
NCAPD2 non-SMC condensin I complex, subunit D2 0.0283629
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0274266
YEATS2 YEATS domain containing 2 0.0274204
HOOK2 hook microtubule-tethering protein 2 0.0266055
EEF1G eukaryotic translation elongation factor 1 gamma 0.0261549
EIF4H eukaryotic translation initiation factor 4H 0.0258606
TPR translocated promoter region, nuclear basket protein 0.0256669
HSPA8 heat shock 70kDa protein 8 0.024994
RPL12 ribosomal protein L12 0.0247566
ANKRD11 ankyrin repeat domain 11 0.0244587
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy 0.0243961
ZNF160 zinc finger protein 160 0.024203
SLK STE20-like kinase 0.024202
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0242006
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0238139
PCDH1 protocadherin 1 0.023809
RPL19 ribosomal protein L19 0.0238034
PNN pinin, desmosome associated protein 0.023709
TPM3 tropomyosin 3 0.0236727
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0235416
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 0.0233841
MBNL2 muscleblind-like splicing regulator 2 0.0231032
SET SET nuclear proto-oncogene 0.0229639
FOSL1 FOS-like antigen 1 0.0226328
PLEC plectin 0.0226118
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0225834
RPL4 ribosomal protein L4 0.0224736
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0223324
VEGFA vascular endothelial growth factor A 0.0222534
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0220928
WSB1 WD repeat and SOCS box containing 1 0.0220172
EHBP1L1 EH domain binding protein 1-like 1 0.0219974
PGK1 phosphoglycerate kinase 1 0.0219593
RPN1 ribophorin I 0.0214032
HDGF hepatoma-derived growth factor 0.0211257
ADM adrenomedullin 0.0209537
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 0.0208723
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0208088
SPAG9 sperm associated antigen 9 0.0207044
RPS19 ribosomal protein S19 0.0206747
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0204222
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.020271
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 0.0201753
SEC23A Sec23 homolog A (S. cerevisiae) 0.0201203
CEP250 centrosomal protein 250kDa 0.0200416
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0200281
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0200195
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0199965
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0198613
CKAP5 cytoskeleton associated protein 5 0.0197426
PRRC2C proline-rich coiled-coil 2C 0.0196826
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.019537
ITGB4 integrin, beta 4 0.0194032
EPHA2 EPH receptor A2 0.019382
PLAU plasminogen activator, urokinase 0.0191187
THRAP3 thyroid hormone receptor associated protein 3 0.0190843

decreased expression

Symbol Name Standardized Value
TP63 tumor protein p63 -0.134325
PSD3 pleckstrin and Sec7 domain containing 3 -0.0945798
TPT1 tumor protein, translationally-controlled 1 -0.0752321
TXNRD1 thioredoxin reductase 1 -0.0739395
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0736127
CD44 CD44 molecule (Indian blood group) -0.0693092
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0631884
TM4SF1 transmembrane 4 L six family member 1 -0.0617714
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0609177
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0548417
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0515764
GCLM glutamate-cysteine ligase, modifier subunit -0.0445869
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0428782
MT1X metallothionein 1X -0.0418124
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0409501
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0394586
RPL35A ribosomal protein L35a -0.0393829
CADM2 cell adhesion molecule 2 -0.0388342
RPS24 ribosomal protein S24 -0.0387467
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0384559
DST dystonin -0.0383697
RPL36A ribosomal protein L36a -0.0365884
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0364222
RPS13 ribosomal protein S13 -0.0349573
RPL37 ribosomal protein L37 -0.0348404
RPLP2 ribosomal protein, large, P2 -0.0342018
HLA-B major histocompatibility complex, class I, B -0.0328914
RPL34 ribosomal protein L34 -0.0326337
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0319542
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0317504
SP100 SP100 nuclear antigen -0.0316081
EHBP1 EH domain binding protein 1 -0.0314333
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0307978
IFIH1 interferon induced with helicase C domain 1 -0.030738
RPS25 ribosomal protein S25 -0.0304068
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0289571
DPYD dihydropyrimidine dehydrogenase -0.0288287
RPS12 ribosomal protein S12 -0.0287227
EGR1 early growth response 1 -0.0281623
ARHGAP29 Rho GTPase activating protein 29 -0.0277587
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0267899
RPLP0 ribosomal protein, large, P0 -0.0267471
RPS6 ribosomal protein S6 -0.0265829
SGK1 serum/glucocorticoid regulated kinase 1 -0.025169
RPLP1 ribosomal protein, large, P1 -0.0250083
RPL31 ribosomal protein L31 -0.0249394
TSC22D2 TSC22 domain family, member 2 -0.0248879
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0248735
WARS1 tryptophanyl-tRNA synthetase 1 -0.0248087
RPS8 ribosomal protein S8 -0.0247087
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0245327
NPAS2 neuronal PAS domain protein 2 -0.0245224
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0244967
NAP1L1 nucleosome assembly protein 1-like 1 -0.024349
SLC38A1 solute carrier family 38, member 1 -0.0241999
BICD1 bicaudal D homolog 1 (Drosophila) -0.0240543
RPS23 ribosomal protein S23 -0.0239822
IPO7 importin 7 -0.0235068
FBXO11 F-box protein 11 -0.0234536
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0233653
RPL38 ribosomal protein L38 -0.0233632
THSD4 thrombospondin, type I, domain containing 4 -0.0228889
CFAP299 cilia and flagella associated protein 299 -0.0225106
RPL27A ribosomal protein L27a -0.0224904
JMJD1C jumonji domain containing 1C -0.0222845
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0222165
CLIP1 CAP-GLY domain containing linker protein 1 -0.0219971
CSMD3 CUB and Sushi multiple domains 3 -0.0219911
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0219595
IFI6 interferon, alpha-inducible protein 6 -0.0219079
ZEB1 zinc finger E-box binding homeobox 1 -0.0216439
RIGI RNA sensor RIG-I -0.0207011
NEK10 NIMA-related kinase 10 -0.0206177
LOC102724023 ES1 protein homolog, mitochondrial -0.0205454
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0205424
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0204058
MT1E metallothionein 1E -0.0204051
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0202869
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0202721
PLSCR1 phospholipid scramblase 1 -0.0201595
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.020142
ZBTB20 zinc finger and BTB domain containing 20 -0.0201245
INTS6 integrator complex subunit 6 -0.0201209
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0199435
VDAC1 voltage-dependent anion channel 1 -0.0196703
ARHGAP5 Rho GTPase activating protein 5 -0.0196475
SDCCAG8 serologically defined colon cancer antigen 8 -0.0195952
PYGL phosphorylase, glycogen, liver -0.0193117
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0191713
USP34 ubiquitin specific peptidase 34 -0.0191029
RPS27A ribosomal protein S27a -0.0190776
EREG epiregulin -0.0189349
CFLAR CASP8 and FADD-like apoptosis regulator -0.0188641
TSC22D1 TSC22 domain family, member 1 -0.0188371
IARS1 isoleucyl-tRNA synthetase 1 -0.0188072
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.018686
FER fer (fps/fes related) tyrosine kinase -0.0184944
RPS27 ribosomal protein S27 -0.0181915
TGM2 transglutaminase 2 -0.0181824
NF1 neurofibromin 1 -0.0180415