Mebendazole_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mebendazole perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mebendazole_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.395719
FTH1 ferritin, heavy polypeptide 1 0.229706
ACTG1 actin gamma 1 0.209953
EEF2 eukaryotic translation elongation factor 2 0.117672
TMSB4X thymosin beta 4, X-linked 0.117299
CALR calreticulin 0.110011
MYH9 myosin, heavy chain 9, non-muscle 0.0979487
NDRG1 N-myc downstream regulated 1 0.0852402
VEGFA vascular endothelial growth factor A 0.079963
BHLHE40 basic helix-loop-helix family, member e40 0.0759249
PLEC plectin 0.0743575
PLAU plasminogen activator, urokinase 0.0700683
SDC4 syndecan 4 0.066332
HSPA8 heat shock 70kDa protein 8 0.0627615
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0619245
G0S2 G0/G1 switch 2 0.0590516
POTEF POTE ankyrin domain family, member F 0.0565437
PTMA prothymosin, alpha 0.0562749
CCNL1 cyclin L1 0.0553212
LAMB3 laminin, beta 3 0.0525673
TPM3 tropomyosin 3 0.0489474
FLNA filamin A, alpha 0.0480525
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0472746
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0470901
EEF1G eukaryotic translation elongation factor 1 gamma 0.0468011
CTSB cathepsin B 0.0442812
RPL7A ribosomal protein L7a 0.04408
DDIT4 DNA-damage-inducible transcript 4 0.0439685
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.0424641
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0424548
HLA-B major histocompatibility complex, class I, B 0.040968
LAMC2 laminin, gamma 2 0.038881
GPX4 glutathione peroxidase 4 0.037142
ADM adrenomedullin 0.0368544
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.036618
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0354106
RBM25 RNA binding motif protein 25 0.035317
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0337784
RPL3 ribosomal protein L3 0.0337578
RPL4 ribosomal protein L4 0.0327569
APLP2 amyloid beta (A4) precursor-like protein 2 0.0325317
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0320772
AHDC1 AT hook, DNA binding motif, containing 1 0.0319078
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0314959
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0307544
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0306314
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0303417
TMED9 transmembrane emp24 protein transport domain containing 9 0.03015
RPS3 ribosomal protein S3 0.0286136
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0284089
MSN moesin 0.0283534
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0282874
EIF4H eukaryotic translation initiation factor 4H 0.0278431
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0272317
RPN1 ribophorin I 0.0272152
TMSB10 thymosin beta 10 0.0271139
KRT8 keratin 8, type II 0.0268211
SEC23A Sec23 homolog A (S. cerevisiae) 0.0261759
SPAG5 sperm associated antigen 5 0.0255085
PPARD peroxisome proliferator-activated receptor delta 0.0254923
EHBP1L1 EH domain binding protein 1-like 1 0.0254765
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0254246
APP amyloid beta (A4) precursor protein 0.0254207
COL6A1 collagen, type VI, alpha 1 0.0253988
CRABP2 cellular retinoic acid binding protein 2 0.0252429
TJP2 tight junction protein 2 0.0247215
TNIP1 TNFAIP3 interacting protein 1 0.0245041
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0240989
HDGF hepatoma-derived growth factor 0.0240293
SRRM2 serine/arginine repetitive matrix 2 0.0239156
PCBP2 poly(rC) binding protein 2 0.0237929
SMAD3 SMAD family member 3 0.0237289
RAD23B RAD23 homolog B (S. cerevisiae) 0.0236701
SFTPA2 surfactant protein A2 0.0232517
RPL19 ribosomal protein L19 0.0232057
AREG amphiregulin 0.0229777
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0229776
RPS17 ribosomal protein S17 0.0229541
FLNB filamin B, beta 0.0229492
MT2A metallothionein 2A 0.0228646
HOOK2 hook microtubule-tethering protein 2 0.0226465
ENO2 enolase 2 (gamma, neuronal) 0.0226164
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0224464
EIF4B eukaryotic translation initiation factor 4B 0.0224107
PLAUR plasminogen activator, urokinase receptor 0.022401
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0223576
HLA-A major histocompatibility complex, class I, A 0.0221558
CLDN4 claudin 4 0.0220266
KRT18 keratin 18, type I 0.0218767
DUSP10 dual specificity phosphatase 10 0.0215443
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0211018
RPL13A ribosomal protein L13a 0.0208179
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0199785
CSF2 colony stimulating factor 2 (granulocyte-macrophage) 0.0199548
UBA6 ubiquitin-like modifier activating enzyme 6 0.0197828
MCL1 myeloid cell leukemia 1 0.019745
ARPC3 actin related protein 2/3 complex, subunit 3, 21kDa 0.0197181
PNN pinin, desmosome associated protein 0.0195743
MACROH2A1 macroH2A.1 histone 0.019548
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.019127

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.265923
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.125943
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.10761
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0850021
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0825645
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0685977
TPT1 tumor protein, translationally-controlled 1 -0.064568
RPL34 ribosomal protein L34 -0.0563158
CANX calnexin -0.0536974
CD2AP CD2-associated protein -0.0525962
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0480619
RPLP0 ribosomal protein, large, P0 -0.0475674
IFI16 interferon, gamma-inducible protein 16 -0.0470671
S100A6 S100 calcium binding protein A6 -0.0469717
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0465975
EXT1 exostosin glycosyltransferase 1 -0.0444578
S100A10 S100 calcium binding protein A10 -0.0411111
IFI27 interferon, alpha-inducible protein 27 -0.0403982
SEC31A SEC31 homolog A (S. cerevisiae) -0.0385836
FBXO32 F-box protein 32 -0.0383163
TMEM123 transmembrane protein 123 -0.0375398
LIMCH1 LIM and calponin homology domains 1 -0.0363093
SQSTM1 sequestosome 1 -0.0350815
RPS13 ribosomal protein S13 -0.0349202
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0342541
IFIH1 interferon induced with helicase C domain 1 -0.0338598
EFNA5 ephrin-A5 -0.0334075
RPLP1 ribosomal protein, large, P1 -0.0332872
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0331822
RPS24 ribosomal protein S24 -0.0326587
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0323152
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0320138
FNDC3B fibronectin type III domain containing 3B -0.03194
IFI6 interferon, alpha-inducible protein 6 -0.0308395
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0299295
TM4SF1 transmembrane 4 L six family member 1 -0.0294106
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0287246
PGK1 phosphoglycerate kinase 1 -0.0287207
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0285737
CEP350 centrosomal protein 350kDa -0.0279107
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0278398
VIM vimentin -0.0273929
H1-0 H1.0 linker histone -0.0273687
C15ORF48 chromosome 15 open reading frame 48 -0.0269397
NF1 neurofibromin 1 -0.0261855
RPS25 ribosomal protein S25 -0.0256615
FAM162A family with sequence similarity 162, member A -0.0255989
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0255928
FTL ferritin, light polypeptide -0.0254455
KDM5B lysine (K)-specific demethylase 5B -0.0251737
BZW1 basic leucine zipper and W2 domains 1 -0.0251321
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0249152
TUBA1B tubulin, alpha 1b -0.0248176
CCND1 cyclin D1 -0.0248092
SP100 SP100 nuclear antigen -0.0247612
ENO1 enolase 1, (alpha) -0.0246403
MAP4 microtubule-associated protein 4 -0.0242033
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0241704
LMO7 LIM domain 7 -0.0239828
ZBTB20 zinc finger and BTB domain containing 20 -0.0239519
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0239238
RPS8 ribosomal protein S8 -0.0238796
LPP LIM domain containing preferred translocation partner in lipoma -0.0237456
MX2 MX dynamin-like GTPase 2 -0.0235409
NAP1L1 nucleosome assembly protein 1-like 1 -0.0234988
F3 coagulation factor III (thromboplastin, tissue factor) -0.023452
PLSCR1 phospholipid scramblase 1 -0.0231316
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0229605
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0225386
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0225108
CSTB cystatin B (stefin B) -0.0222256
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0219823
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0219593
ARF1 ADP-ribosylation factor 1 -0.0215266
AHNAK AHNAK nucleoprotein -0.021483
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.021423
ERBIN erbb2 interacting protein -0.0213586
RAI14 retinoic acid induced 14 -0.0212023
CERT1 ceramide transporter 1 -0.021006
LDHA lactate dehydrogenase A -0.0209922
AFF4 AF4/FMR2 family, member 4 -0.0209807
PICALM phosphatidylinositol binding clathrin assembly protein -0.0209621
RPS27A ribosomal protein S27a -0.0209371
RPLP2 ribosomal protein, large, P2 -0.0208115
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0205689
RTN3 reticulon 3 -0.0204244
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0201815
RPS6 ribosomal protein S6 -0.0201602
RAB1A RAB1A, member RAS oncogene family -0.0199265
TKT transketolase -0.0199217
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.019791
RYBP RING1 and YY1 binding protein -0.0196433
ANKRD17 ankyrin repeat domain 17 -0.0195996
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0194801
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0194028
VCL vinculin -0.0193355
PALLD palladin, cytoskeletal associated protein -0.0192731
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.01921
BLZF1 basic leucine zipper nuclear factor 1 -0.0191063
DSG2 desmoglein 2 -0.0190699