Medroxyprogesterone acetate_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Medroxyprogesterone acetate perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Medroxyprogesterone acetate_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPLP1 ribosomal protein, large, P1 0.165171
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.113541
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.103499
EEF1G eukaryotic translation elongation factor 1 gamma 0.0875436
PKM pyruvate kinase, muscle 0.0868849
RPLP0 ribosomal protein, large, P0 0.0859016
PELI1 pellino E3 ubiquitin protein ligase 1 0.0832239
FLNB filamin B, beta 0.0713212
RPL4 ribosomal protein L4 0.0705254
LOC112694756 uncharaterized LOC112694756 0.0673369
TMSB10 thymosin beta 10 0.0655171
PGK1 phosphoglycerate kinase 1 0.0615515
LDHA lactate dehydrogenase A 0.0610959
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0600645
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0578451
ANXA2 annexin A2 0.0575575
PTMA prothymosin, alpha 0.0434009
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.043177
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0426994
THSD4 thrombospondin, type I, domain containing 4 0.0424015
ITGB4 integrin, beta 4 0.041024
FTH1 ferritin, heavy polypeptide 1 0.0399284
RACK1 receptor for activated C kinase 1 0.0392454
ACTG1 actin gamma 1 0.0379694
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0375169
KLF6 Kruppel-like factor 6 0.0369382
UBE2H ubiquitin-conjugating enzyme E2H 0.0347555
RPL35A ribosomal protein L35a 0.0345907
EEF2 eukaryotic translation elongation factor 2 0.0343402
F3 coagulation factor III (thromboplastin, tissue factor) 0.0335825
MYO1E myosin IE 0.0323893
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0320101
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 0.0310753
BAIAP2L1 BAI1-associated protein 2-like 1 0.0286434
PALLD palladin, cytoskeletal associated protein 0.0286251
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0272492
APP amyloid beta (A4) precursor protein 0.0269783
KRT8 keratin 8, type II 0.0266294
KRT18 keratin 18, type I 0.0255091
CUX1 cut-like homeobox 1 0.0252837
AHNAK AHNAK nucleoprotein 0.0251003
PYGB phosphorylase, glycogen; brain 0.0250508
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0248568
RPL34 ribosomal protein L34 0.0243449
H1-0 H1.0 linker histone 0.0241184
TUBB tubulin, beta class I 0.0240773
EPHA2 EPH receptor A2 0.0238306
RPL27A ribosomal protein L27a 0.0237495
RPL30 ribosomal protein L30 0.023451
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0232049
TPM4 tropomyosin 4 0.0231569
ARF1 ADP-ribosylation factor 1 0.0227071
RPL39 ribosomal protein L39 0.0224526
LARP1 La ribonucleoprotein domain family, member 1 0.0224075
PDIA3 protein disulfide isomerase family A, member 3 0.0220695
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0216056
ESYT2 extended synaptotagmin-like protein 2 0.0216053
EGR1 early growth response 1 0.0215225
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0213399
PRSS3 protease, serine, 3 0.0207289
CALR calreticulin 0.0207231
RPS16 ribosomal protein S16 0.0206207
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0204241
RPL13A ribosomal protein L13a 0.020423
ATP10B ATPase, class V, type 10B 0.0203902
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.0201986
ARHGEF18 Rho/Rac guanine nucleotide exchange factor (GEF) 18 0.0196688
DNM2 dynamin 2 0.0196192
KRT19 keratin 19, type I 0.0194088
NPEPPS aminopeptidase puromycin sensitive 0.0194003
PCBP1 poly(rC) binding protein 1 0.0193407
VDAC1 voltage-dependent anion channel 1 0.0191732
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.0189839
HMGA1 high mobility group AT-hook 1 0.0189578
RPS4X ribosomal protein S4, X-linked 0.0185056
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0184099
RREB1 ras responsive element binding protein 1 0.018369
UBE2R2 ubiquitin-conjugating enzyme E2R 2 0.0182025
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 0.0180928
NRN1 neuritin 1 0.0177316
HSPA8 heat shock 70kDa protein 8 0.0176756
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0175553
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa 0.0174389
MPRIP myosin phosphatase Rho interacting protein 0.0173407
RPS20 ribosomal protein S20 0.0172685
CD164 CD164 molecule, sialomucin 0.0170344
OXSR1 oxidative stress responsive 1 0.0169491
NCOR2 nuclear receptor corepressor 2 0.0168255
TC2N tandem C2 domains, nuclear 0.0167195
ENO1 enolase 1, (alpha) 0.0167008
DSG2 desmoglein 2 0.0163547
RPL8 ribosomal protein L8 0.0162288
SOX9 SRY (sex determining region Y)-box 9 0.0161907
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0160076
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.0157775
BCL2L1 BCL2-like 1 0.0156149
NIBAN2 niban apoptosis regulator 2 0.0154097
GNAS GNAS complex locus 0.0153826
TMEM123 transmembrane protein 123 0.0153067
CYP2S1 cytochrome P450, family 2, subfamily S, polypeptide 1 0.0151326

decreased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.104997
PDE4D phosphodiesterase 4D, cAMP-specific -0.103154
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0801472
RPS2 ribosomal protein S2 -0.07886
RPL9 ribosomal protein L9 -0.0651388
GOLGA4 golgin A4 -0.0608245
AKAP9 A kinase (PRKA) anchor protein 9 -0.0559462
ATXN1 ataxin 1 -0.0552901
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0544532
LMO7 LIM domain 7 -0.0544378
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0524998
TXNRD1 thioredoxin reductase 1 -0.0522324
ITPRID2 ITPR interacting domain containing 2 -0.0515262
EXT1 exostosin glycosyltransferase 1 -0.0502479
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0495815
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0491724
GMDS GDP-mannose 4,6-dehydratase -0.0484858
DSCAM Down syndrome cell adhesion molecule -0.0482718
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type -0.0475794
RPS23 ribosomal protein S23 -0.0454326
RPL3 ribosomal protein L3 -0.0443752
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0442926
ASPH aspartate beta-hydroxylase -0.0432665
GOLGB1 golgin B1 -0.042971
PCBP2 poly(rC) binding protein 2 -0.0425556
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0423064
RIGI RNA sensor RIG-I -0.0410095
RPS13 ribosomal protein S13 -0.0407216
MYO6 myosin VI -0.0396721
HLA-B major histocompatibility complex, class I, B -0.0395046
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0392319
RAD51B RAD51 paralog B -0.0390024
TRIM2 tripartite motif containing 2 -0.0383842
AREG amphiregulin -0.0381438
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.037962
FNDC3B fibronectin type III domain containing 3B -0.0378322
ZFAND3 zinc finger, AN1-type domain 3 -0.0377728
SQSTM1 sequestosome 1 -0.0371634
CSNK1A1 casein kinase 1, alpha 1 -0.0368728
PRELID2 PRELI domain containing 2 -0.0367365
SETD5 SET domain containing 5 -0.0364911
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0364171
INTS6 integrator complex subunit 6 -0.0363534
RNF145 ring finger protein 145 -0.0363242
CCSER1 coiled-coil serine-rich protein 1 -0.0356199
BTBD9 BTB (POZ) domain containing 9 -0.0350212
ANKRD11 ankyrin repeat domain 11 -0.0349525
RPL21 ribosomal protein L21 -0.0348271
MON2 MON2 homolog (S. cerevisiae) -0.0347882
TTC3 tetratricopeptide repeat domain 3 -0.0347127
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0340743
RFX3 regulatory factor X, 3 (influences HLA class II expression) -0.033995
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0337062
ZFC3H1 zinc finger, C3H1-type containing -0.0334172
RBM39 RNA binding motif protein 39 -0.0326723
VMP1 vacuole membrane protein 1 -0.0317924
ITGA6 integrin, alpha 6 -0.0317607
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.031605
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.031096
CCPG1 cell cycle progression 1 -0.0308841
RPL36 ribosomal protein L36 -0.0308437
NKTR natural killer cell triggering receptor -0.0307865
RPS19 ribosomal protein S19 -0.0306486
SOS1 son of sevenless homolog 1 (Drosophila) -0.0306279
COG5 component of oligomeric golgi complex 5 -0.0303694
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0303242
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.029677
WARS1 tryptophanyl-tRNA synthetase 1 -0.0295174
CADPS2 Ca++-dependent secretion activator 2 -0.0293233
ARHGAP29 Rho GTPase activating protein 29 -0.0292754
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.0290129
TTC17 tetratricopeptide repeat domain 17 -0.0289612
COG6 component of oligomeric golgi complex 6 -0.0287458
TMF1 TATA element modulatory factor 1 -0.028727
ZNF638 zinc finger protein 638 -0.0286394
EREG epiregulin -0.028516
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0278149
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0277213
DSPP dentin sialophosphoprotein -0.0275576
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0274901
MX1 MX dynamin-like GTPase 1 -0.026749
PDLIM5 PDZ and LIM domain 5 -0.0267012
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0266611
USP53 ubiquitin specific peptidase 53 -0.0265486
NEBL nebulette -0.0265302
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0264177
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0264156
ARHGAP26 Rho GTPase activating protein 26 -0.0262435
PGM3 phosphoglucomutase 3 -0.0262385
CXADR coxsackie virus and adenovirus receptor -0.0259654
SFPQ splicing factor proline/glutamine-rich -0.0258664
KMT2C lysine (K)-specific methyltransferase 2C -0.0258642
PTEN phosphatase and tensin homolog -0.0256771
UTRN utrophin -0.0253806
MX2 MX dynamin-like GTPase 2 -0.0253045
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.025243
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0250053
PSAT1 phosphoserine aminotransferase 1 -0.0249335
RNF213 ring finger protein 213 -0.024498
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0244908