Medroxyprogesterone acetate_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Medroxyprogesterone acetate perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Medroxyprogesterone acetate_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF1G eukaryotic translation elongation factor 1 gamma 0.144614
PABPC1 poly(A) binding protein, cytoplasmic 1 0.141897
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.133134
FLNB filamin B, beta 0.124547
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.12357
PGK1 phosphoglycerate kinase 1 0.111227
EEF2 eukaryotic translation elongation factor 2 0.106042
ACTG1 actin gamma 1 0.0991779
CD68 CD68 molecule 0.0875401
PBX3 pre-B-cell leukemia homeobox 3 0.0720096
MT2A metallothionein 2A 0.0697862
ANTXR2 anthrax toxin receptor 2 0.0658483
HMGA1 high mobility group AT-hook 1 0.0632586
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.061575
PKM pyruvate kinase, muscle 0.0612463
FRMD4A FERM domain containing 4A 0.059839
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0588116
RASA2 RAS p21 protein activator 2 0.0579665
MCL1 myeloid cell leukemia 1 0.0578422
PTK2 protein tyrosine kinase 2 0.0513238
FLNA filamin A, alpha 0.0475634
TMEM156 transmembrane protein 156 0.0468306
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 0.0464289
SHANK1 SH3 and multiple ankyrin repeat domains 1 0.0460327
PDIA3 protein disulfide isomerase family A, member 3 0.0457316
MAPKAP1 mitogen-activated protein kinase associated protein 1 0.0455283
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0454565
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0453992
SRRM2 serine/arginine repetitive matrix 2 0.0439681
TPD52 tumor protein D52 0.0436577
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0436141
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0424143
PARD3 par-3 family cell polarity regulator 0.0423096
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.042258
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.041969
LDHA lactate dehydrogenase A 0.0402666
NAV3 neuron navigator 3 0.0399783
FOSL1 FOS-like antigen 1 0.0397093
ANKRD17 ankyrin repeat domain 17 0.0394067
AGO2 argonaute RISC catalytic component 2 0.0392395
TMEM41B transmembrane protein 41B 0.0389182
STC1 stanniocalcin 1 0.0382806
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0379125
TM4SF19 transmembrane 4 L six family member 19 0.0379059
EXT1 exostosin glycosyltransferase 1 0.0377212
CAPRIN2 caprin family member 2 0.0371748
TRIO trio Rho guanine nucleotide exchange factor 0.0370936
CREB5 cAMP responsive element binding protein 5 0.0367595
ARHGAP22 Rho GTPase activating protein 22 0.0367223
LOC112694756 uncharaterized LOC112694756 0.0362404
IARS1 isoleucyl-tRNA synthetase 1 0.0361402
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.0353101
C2CD2 C2 calcium-dependent domain containing 2 0.0343775
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0340401
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0337353
ANK2 ankyrin 2, neuronal 0.0328805
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.032662
DLC1 DLC1 Rho GTPase activating protein 0.0326163
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0322665
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0317203
CDC27 cell division cycle 27 0.0314626
NUP58 nucleoporin 58 0.0313015
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0308785
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.0307442
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0307202
CORO1C coronin, actin binding protein, 1C 0.0306987
DGKI diacylglycerol kinase, iota 0.0305647
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0303027
ADNP activity-dependent neuroprotector homeobox 0.0302351
YEATS2 YEATS domain containing 2 0.0299823
SRPK2 SRSF protein kinase 2 0.0298545
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0297538
RTN4 reticulon 4 0.0297259
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0291093
MACF1 microtubule-actin crosslinking factor 1 0.0289018
PFN1 profilin 1 0.0289015
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0287948
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0285606
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0282852
AXL AXL receptor tyrosine kinase 0.0282352
GSE1 Gse1 coiled-coil protein 0.0279968
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0279108
ERBIN erbb2 interacting protein 0.0277831
NAV2 neuron navigator 2 0.0276506
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0276102
SPRY4 sprouty homolog 4 (Drosophila) 0.0272877
MYH9 myosin, heavy chain 9, non-muscle 0.0269224
RFX7 regulatory factor X, 7 0.0266813
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0266311
NDRG1 N-myc downstream regulated 1 0.0266146
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0265852
ELL2 elongation factor, RNA polymerase II, 2 0.0265777
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0265116
SPRED2 sprouty-related, EVH1 domain containing 2 0.0262926
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.026289
AFF1 AF4/FMR2 family, member 1 0.026189
RGMB repulsive guidance molecule family member b 0.0261711
FKBP10 FK506 binding protein 10, 65 kDa 0.0259188
BBX bobby sox homolog (Drosophila) 0.0255907
CAPN2 calpain 2, (m/II) large subunit 0.0255814

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.191498
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.117937
FRMD6 FERM domain containing 6 -0.100375
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0740843
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.074017
RPS8 ribosomal protein S8 -0.0716612
TMSB10 thymosin beta 10 -0.0711804
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0706213
PTMA prothymosin, alpha -0.0626242
RPL12 ribosomal protein L12 -0.0606171
RPS24 ribosomal protein S24 -0.0567161
MTAP methylthioadenosine phosphorylase -0.0551123
RPL23 ribosomal protein L23 -0.0545455
SP100 SP100 nuclear antigen -0.054189
RPL7 ribosomal protein L7 -0.0537189
AHNAK AHNAK nucleoprotein -0.0535442
HMGA2 high mobility group AT-hook 2 -0.0527962
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0517812
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0507698
INTS6 integrator complex subunit 6 -0.0490134
TPT1 tumor protein, translationally-controlled 1 -0.0474344
RPL7A ribosomal protein L7a -0.0466506
RPL34 ribosomal protein L34 -0.0449734
RPL5 ribosomal protein L5 -0.0434428
NABP1 nucleic acid binding protein 1 -0.0434298
CANX calnexin -0.0417862
STAT1 signal transducer and activator of transcription 1, 91kDa -0.03936
IFI16 interferon, gamma-inducible protein 16 -0.0393563
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0391295
WNT2B wingless-type MMTV integration site family, member 2B -0.038944
RPL19 ribosomal protein L19 -0.0381835
RPL32 ribosomal protein L32 -0.0381461
TTR transthyretin -0.0379564
RPS6 ribosomal protein S6 -0.0368352
RPL31 ribosomal protein L31 -0.0357451
RPL26 ribosomal protein L26 -0.0344788
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0319046
RPS27A ribosomal protein S27a -0.0311096
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.030571
RPL37A ribosomal protein L37a -0.0304721
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0300782
RPLP2 ribosomal protein, large, P2 -0.0299099
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.029834
RPL35A ribosomal protein L35a -0.0295377
AEBP2 AE binding protein 2 -0.0294851
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.028775
RSL1D1 ribosomal L1 domain containing 1 -0.0286928
PHF3 PHD finger protein 3 -0.0286783
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0283202
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0282293
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0279887
VCL vinculin -0.0277806
RPS25 ribosomal protein S25 -0.0269278
RPL10A ribosomal protein L10a -0.0266543
ZNF438 zinc finger protein 438 -0.0258968
RPS15 ribosomal protein S15 -0.0251465
GDI2 GDP dissociation inhibitor 2 -0.0251215
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0250283
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0249988
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0248137
RPS17 ribosomal protein S17 -0.024248
RPS23 ribosomal protein S23 -0.0242226
RPL9 ribosomal protein L9 -0.0242144
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0241561
RPLP1 ribosomal protein, large, P1 -0.0241108
RPS5 ribosomal protein S5 -0.0237607
SENP5 SUMO1/sentrin specific peptidase 5 -0.0236852
MYRFL myelin regulatory factor-like -0.0235785
BZW1 basic leucine zipper and W2 domains 1 -0.0234337
GOLGB1 golgin B1 -0.0232045
MSH4 mutS homolog 4 -0.0229267
DIAPH3 diaphanous-related formin 3 -0.0229225
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0227274
RPL14 ribosomal protein L14 -0.0226047
GPATCH2L G patch domain containing 2-like -0.0224755
RPS14 ribosomal protein S14 -0.0222623
YBX1 Y box binding protein 1 -0.0221271
RAD21 RAD21 homolog (S. pombe) -0.0221083
STAU1 staufen double-stranded RNA binding protein 1 -0.0221081
VIM vimentin -0.0218888
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0217979
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.021789
EIF1 eukaryotic translation initiation factor 1 -0.0217499
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked -0.0216509
ASPH aspartate beta-hydroxylase -0.0209789
RIGI RNA sensor RIG-I -0.0207882
SQSTM1 sequestosome 1 -0.0207247
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.0207184
RPS29 ribosomal protein S29 -0.0204332
CCDC47 coiled-coil domain containing 47 -0.0203951
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa -0.0198282
RPS21 ribosomal protein S21 -0.0196844
LOC102724023 ES1 protein homolog, mitochondrial -0.0195636
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like -0.0194941
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0194634
STK4 serine/threonine kinase 4 -0.0193804
SGMS2 sphingomyelin synthase 2 -0.0193097
MORF4L2 mortality factor 4 like 2 -0.019306
CENPF centromere protein F, 350/400kDa -0.0192382
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0189682