Medroxyprogesterone acetate_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Medroxyprogesterone acetate perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Medroxyprogesterone acetate_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.213233
AKAP12 A kinase (PRKA) anchor protein 12 0.170474
FTH1 ferritin, heavy polypeptide 1 0.142602
EEF1G eukaryotic translation elongation factor 1 gamma 0.134736
PGK1 phosphoglycerate kinase 1 0.132269
LDHA lactate dehydrogenase A 0.118009
NDRG1 N-myc downstream regulated 1 0.11254
COL6A3 collagen, type VI, alpha 3 0.110555
TGFBI transforming growth factor, beta-induced, 68kDa 0.108574
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0924038
NAV2 neuron navigator 2 0.0922524
MYH9 myosin, heavy chain 9, non-muscle 0.0879933
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.08211
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0739483
EEF2 eukaryotic translation elongation factor 2 0.0719741
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0672254
HMGA2 high mobility group AT-hook 2 0.0660624
PKM pyruvate kinase, muscle 0.0650613
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.060894
FNDC3B fibronectin type III domain containing 3B 0.0569308
VEGFA vascular endothelial growth factor A 0.0569035
HIPK2 homeodomain interacting protein kinase 2 0.0553857
FLNA filamin A, alpha 0.0536172
STC1 stanniocalcin 1 0.0523096
CCNL1 cyclin L1 0.0516685
FLNB filamin B, beta 0.0501795
EFNA5 ephrin-A5 0.0496801
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0485464
TGM2 transglutaminase 2 0.0476351
SFTPA2 surfactant protein A2 0.0473058
APLP2 amyloid beta (A4) precursor-like protein 2 0.0465284
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0463718
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0461731
SEPTIN9 septin 9 0.046054
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0454342
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0453794
CD44 CD44 molecule (Indian blood group) 0.0449919
COL5A1 collagen, type V, alpha 1 0.0441083
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0416412
ZMIZ1 zinc finger, MIZ-type containing 1 0.04111
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0406648
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0403335
NAMPT nicotinamide phosphoribosyltransferase 0.0398741
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0390606
C3 complement component 3 0.0385393
MCL1 myeloid cell leukemia 1 0.0379247
HMGA1 high mobility group AT-hook 1 0.0377242
PHF21A PHD finger protein 21A 0.0375403
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0370923
ZMYND8 zinc finger, MYND-type containing 8 0.0369553
FBXO32 F-box protein 32 0.0353014
CD68 CD68 molecule 0.0349997
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0337524
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0334918
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0332121
PLIN2 perilipin 2 0.0328127
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0325143
TRIO trio Rho guanine nucleotide exchange factor 0.0319491
ADM adrenomedullin 0.0315626
TRAM2 translocation associated membrane protein 2 0.0315177
EGFR epidermal growth factor receptor 0.0314189
ARRDC3 arrestin domain containing 3 0.0313299
CDK19 cyclin-dependent kinase 19 0.0312034
NAV1 neuron navigator 1 0.0311835
VCAN versican 0.0309672
ERRFI1 ERBB receptor feedback inhibitor 1 0.0304233
FAM13A family with sequence similarity 13, member A 0.0302048
ENO1 enolase 1, (alpha) 0.0299119
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0298556
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0298285
MMP2 matrix metallopeptidase 2 0.0295586
BRD2 bromodomain containing 2 0.0295395
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0293358
PDIA3 protein disulfide isomerase family A, member 3 0.0288372
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0286973
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.028686
YEATS2 YEATS domain containing 2 0.0285305
LOXL2 lysyl oxidase-like 2 0.0285222
NFE2L1 nuclear factor, erythroid 2-like 1 0.0283839
ESYT2 extended synaptotagmin-like protein 2 0.0277427
ICAM1 intercellular adhesion molecule 1 0.0275541
MYOF myoferlin 0.0274229
PRICKLE2 prickle homolog 2 (Drosophila) 0.0273887
UBA6 ubiquitin-like modifier activating enzyme 6 0.0268882
TNS3 tensin 3 0.026657
PPP1R18 protein phosphatase 1, regulatory subunit 18 0.0265333
ASPH aspartate beta-hydroxylase 0.0257538
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.025326
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0252479
LOX lysyl oxidase 0.0249123
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0248515
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0247573
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0247506
CD59 CD59 molecule, complement regulatory protein 0.0245432
C1D C1D nuclear receptor corepressor 0.0244686
PTP4A1 protein tyrosine phosphatase type IVA, member 1 0.0243735
NCOR2 nuclear receptor corepressor 2 0.0242352
CTSA cathepsin A 0.0240568
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0237585
NONO non-POU domain containing, octamer-binding 0.0237523

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.224954
VCL vinculin -0.124071
TMSB10 thymosin beta 10 -0.123791
FRMD4A FERM domain containing 4A -0.122213
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.115363
FTL ferritin, light polypeptide -0.10072
IER3 immediate early response 3 -0.0941408
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0837809
PTMA prothymosin, alpha -0.0637564
RPS24 ribosomal protein S24 -0.0611973
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0598322
EXT1 exostosin glycosyltransferase 1 -0.0569983
BICC1 BicC family RNA binding protein 1 -0.055535
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0550528
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0549747
AHNAK AHNAK nucleoprotein -0.0528155
EIF1 eukaryotic translation initiation factor 1 -0.0518634
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0512643
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0497006
TMSB4X thymosin beta 4, X-linked -0.0495529
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0493065
TPT1 tumor protein, translationally-controlled 1 -0.0472075
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0469125
RIGI RNA sensor RIG-I -0.0461041
KYNU kynureninase -0.0460508
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0432032
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0430559
RPL19 ribosomal protein L19 -0.0409209
MT2A metallothionein 2A -0.0402836
MORF4L2 mortality factor 4 like 2 -0.0402158
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0401132
RPS3 ribosomal protein S3 -0.0396268
FRMD5 FERM domain containing 5 -0.0391785
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0381746
OGA O-GlcNAcase -0.0374112
RPL32 ribosomal protein L32 -0.0366395
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0351762
CADM1 cell adhesion molecule 1 -0.0351204
NABP1 nucleic acid binding protein 1 -0.0342037
PALLD palladin, cytoskeletal associated protein -0.0339338
NAP1L1 nucleosome assembly protein 1-like 1 -0.0338241
RPL12 ribosomal protein L12 -0.0330258
KPNB1 karyopherin (importin) beta 1 -0.0326002
RPL26 ribosomal protein L26 -0.0323548
SBF2 SET binding factor 2 -0.0322174
HLA-B major histocompatibility complex, class I, B -0.0322155
ZFAND3 zinc finger, AN1-type domain 3 -0.0321558
RPS12 ribosomal protein S12 -0.0306759
SP100 SP100 nuclear antigen -0.0306183
RPS8 ribosomal protein S8 -0.0291401
CALD1 caldesmon 1 -0.0283886
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0282083
CLIC4 chloride intracellular channel 4 -0.0280354
THBS1 thrombospondin 1 -0.027851
QKI QKI, KH domain containing, RNA binding -0.0272353
RPL36A ribosomal protein L36a -0.0271813
ELL2 elongation factor, RNA polymerase II, 2 -0.027082
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0267937
RPL31 ribosomal protein L31 -0.0266511
TXNRD1 thioredoxin reductase 1 -0.0266466
RRBP1 ribosome binding protein 1 -0.0266145
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0262185
UBC ubiquitin C -0.0258512
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0254853
CANX calnexin -0.025479
USP9X ubiquitin specific peptidase 9, X-linked -0.0253793
EHBP1 EH domain binding protein 1 -0.0253497
NCKAP5 NCK-associated protein 5 -0.0253024
NCOA7 nuclear receptor coactivator 7 -0.0252491
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0249268
AFF4 AF4/FMR2 family, member 4 -0.0246841
GOLGA3 golgin A3 -0.0242575
RPL34 ribosomal protein L34 -0.024177
MAP4 microtubule-associated protein 4 -0.0240154
MAPK8 mitogen-activated protein kinase 8 -0.0239916
RPL14 ribosomal protein L14 -0.023957
KDM3A lysine (K)-specific demethylase 3A -0.023793
RPLP2 ribosomal protein, large, P2 -0.0237117
RTN4 reticulon 4 -0.0235017
GOLGB1 golgin B1 -0.0233717
COL1A1 collagen, type I, alpha 1 -0.0232966
UBE2B ubiquitin-conjugating enzyme E2B -0.0232841
RPS27A ribosomal protein S27a -0.0231441
RPLP1 ribosomal protein, large, P1 -0.0227188
ANXA2 annexin A2 -0.0227019
SERINC1 serine incorporator 1 -0.0224682
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0222474
RAP1B RAP1B, member of RAS oncogene family -0.0222273
SERINC3 serine incorporator 3 -0.0220962
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 -0.0218272
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0217955
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0215785
TRIM55 tripartite motif containing 55 -0.0215418
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0212512
SMAD2 SMAD family member 2 -0.0212105
RBM39 RNA binding motif protein 39 -0.0211247
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0209025
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0208549
NF1 neurofibromin 1 -0.0206952
GNAS GNAS complex locus -0.0206598