Medroxyprogesterone acetate_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Medroxyprogesterone acetate perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Medroxyprogesterone acetate_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TGFBI transforming growth factor, beta-induced, 68kDa 0.225196
FN1 fibronectin 1 0.160438
FTH1 ferritin, heavy polypeptide 1 0.129879
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.102408
LOX lysyl oxidase 0.0996378
EGFR epidermal growth factor receptor 0.0869222
COL6A3 collagen, type VI, alpha 3 0.0829906
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0818732
PDIA3 protein disulfide isomerase family A, member 3 0.0810984
HMGA2 high mobility group AT-hook 2 0.0778418
CXCL8 chemokine (C-X-C motif) ligand 8 0.0771485
TNS3 tensin 3 0.0653755
NCOR2 nuclear receptor corepressor 2 0.0640853
HIP1 huntingtin interacting protein 1 0.0591513
MAP1B microtubule-associated protein 1B 0.0585421
LOC112694756 uncharaterized LOC112694756 0.0561146
ADM adrenomedullin 0.0520504
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0503541
FLNA filamin A, alpha 0.0501212
PKM pyruvate kinase, muscle 0.0483243
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0480874
IGFBP7 insulin-like growth factor binding protein 7 0.047692
ECE1 endothelin converting enzyme 1 0.0470285
FGFR2 fibroblast growth factor receptor 2 0.0467327
POTEF POTE ankyrin domain family, member F 0.0449386
AKAP12 A kinase (PRKA) anchor protein 12 0.042545
ARRDC3 arrestin domain containing 3 0.0420786
LOXL2 lysyl oxidase-like 2 0.0415273
SRPK2 SRSF protein kinase 2 0.0411936
GLG1 golgi glycoprotein 1 0.0395938
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0392745
PGK1 phosphoglycerate kinase 1 0.0391938
HIPK2 homeodomain interacting protein kinase 2 0.0391758
VDAC1 voltage-dependent anion channel 1 0.0385903
ZFHX3 zinc finger homeobox 3 0.0372854
EEF1G eukaryotic translation elongation factor 1 gamma 0.0365486
EXOC4 exocyst complex component 4 0.036151
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0360631
BRWD1 bromodomain and WD repeat domain containing 1 0.0351817
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 0.0345251
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0341899
DOCK1 dedicator of cytokinesis 1 0.0335721
PRRC2B proline-rich coiled-coil 2B 0.0334523
GOLGB1 golgin B1 0.033433
COL6A1 collagen, type VI, alpha 1 0.0328095
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0323586
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0322348
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 0.0319192
SUN1 Sad1 and UNC84 domain containing 1 0.0317828
MPRIP myosin phosphatase Rho interacting protein 0.0311149
RICTOR RPTOR independent companion of MTOR, complex 2 0.0302781
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 0.0302748
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0300551
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 0.0299181
ACTG1 actin gamma 1 0.0298856
TTC17 tetratricopeptide repeat domain 17 0.0295036
MYADM myeloid-associated differentiation marker 0.0294793
COG6 component of oligomeric golgi complex 6 0.0293255
SDK1 sidekick cell adhesion molecule 1 0.0291731
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0289755
APP amyloid beta (A4) precursor protein 0.0289266
AOPEP aminopeptidase O (putative) 0.0287239
MTDH metadherin 0.0285444
MAML2 mastermind-like 2 (Drosophila) 0.028496
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0284392
PHF14 PHD finger protein 14 0.0282105
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0281611
IRAK2 interleukin-1 receptor-associated kinase 2 0.0281423
TTC28 tetratricopeptide repeat domain 28 0.0281018
ITFG1 integrin alpha FG-GAP repeat containing 1 0.0277534
WNK1 WNK lysine deficient protein kinase 1 0.0273349
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0271886
MTMR3 myotubularin related protein 3 0.0270799
TBC1D5 TBC1 domain family, member 5 0.0268787
CDK6 cyclin-dependent kinase 6 0.0268197
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.026732
ENO1 enolase 1, (alpha) 0.026555
EFNA5 ephrin-A5 0.0264706
TLN1 talin 1 0.0264698
DPYSL2 dihydropyrimidinase-like 2 0.0262876
OSMR oncostatin M receptor 0.0261702
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0261491
TRERF1 transcriptional regulating factor 1 0.026067
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0259127
FAM20C family with sequence similarity 20, member C 0.0258464
APLP2 amyloid beta (A4) precursor-like protein 2 0.0258202
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.0250623
LASP1 LIM and SH3 protein 1 0.0249904
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0248825
PRMT2 protein arginine methyltransferase 2 0.0248451
ALK anaplastic lymphoma receptor tyrosine kinase 0.0246237
CCND1 cyclin D1 0.0245716
MBNL1 muscleblind-like splicing regulator 1 0.0245457
SYNPO synaptopodin 0.0245313
SP4 Sp4 transcription factor 0.0243608
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0243171
TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast) 0.024312
EGLN3 egl-9 family hypoxia-inducible factor 3 0.024154
FAM120A family with sequence similarity 120A 0.0241467
MYH9 myosin, heavy chain 9, non-muscle 0.0240536

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.248294
TMSB10 thymosin beta 10 -0.142931
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.109692
TRIO trio Rho guanine nucleotide exchange factor -0.0976667
ATP13A3 ATPase type 13A3 -0.0819646
TENT5A terminal nucleotidyltransferase 5A -0.0714363
COL1A2 collagen, type I, alpha 2 -0.0656466
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 -0.0620364
IGFBP3 insulin-like growth factor binding protein 3 -0.0615388
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0543545
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.054232
VIM vimentin -0.0540614
TIMP3 TIMP metallopeptidase inhibitor 3 -0.052293
UBC ubiquitin C -0.051966
CADM1 cell adhesion molecule 1 -0.0511078
PTMA prothymosin, alpha -0.0507251
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0503498
CALD1 caldesmon 1 -0.0490684
ELL2 elongation factor, RNA polymerase II, 2 -0.0485037
COL1A1 collagen, type I, alpha 1 -0.0476767
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0471727
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0470373
LMNA lamin A/C -0.0451705
H3-3B H3.3 histone B -0.0447245
TRA2A transformer 2 alpha homolog (Drosophila) -0.0445732
KMT2E lysine (K)-specific methyltransferase 2E -0.0445103
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0442562
EIF1 eukaryotic translation initiation factor 1 -0.0439143
CANX calnexin -0.0433433
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0402917
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0402108
SDC4 syndecan 4 -0.0400218
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0399491
FRMD4A FERM domain containing 4A -0.0397228
CLIC4 chloride intracellular channel 4 -0.0386645
S100A9 S100 calcium binding protein A9 -0.0383983
MT2A metallothionein 2A -0.0381836
ZFC3H1 zinc finger, C3H1-type containing -0.0380905
UBE2H ubiquitin-conjugating enzyme E2H -0.0379558
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.03701
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0368436
FTL ferritin, light polypeptide -0.0365876
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0360049
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.0354945
SEC24D SEC24 family member D -0.0354721
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.03507
HMGB2 high mobility group box 2 -0.0347508
GLIS3 GLIS family zinc finger 3 -0.0347062
RPL37A ribosomal protein L37a -0.0344548
SHB Src homology 2 domain containing adaptor protein B -0.0343982
PRELID2 PRELI domain containing 2 -0.0339282
OGA O-GlcNAcase -0.0336941
CLINT1 clathrin interactor 1 -0.0336562
ATP11B ATPase, class VI, type 11B -0.0336405
DYM dymeclin -0.033585
IFRD1 interferon-related developmental regulator 1 -0.0332623
TMSB4X thymosin beta 4, X-linked -0.0332564
MAPK8 mitogen-activated protein kinase 8 -0.0325935
CSNK1A1 casein kinase 1, alpha 1 -0.0323034
TPT1 tumor protein, translationally-controlled 1 -0.031866
MARCHF6 membrane associated ring-CH-type finger 6 -0.0316504
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0313769
NOP58 NOP58 ribonucleoprotein -0.031281
RACK1 receptor for activated C kinase 1 -0.0311943
MATR3 matrin 3 -0.0311546
AVL9 AVL9 homolog (S. cerevisiase) -0.0309465
CALR calreticulin -0.0309123
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0307713
GORASP2 golgi reassembly stacking protein 2, 55kDa -0.0306322
CAMTA1 calmodulin binding transcription activator 1 -0.030439
TPD52 tumor protein D52 -0.0300133
RPS12 ribosomal protein S12 -0.0299413
RASA3 RAS p21 protein activator 3 -0.029858
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0297646
JAG1 jagged 1 -0.0295713
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0294463
TFG TRK-fused gene -0.0294432
AHNAK AHNAK nucleoprotein -0.0289435
BMERB1 bMERB domain containing 1 -0.0287049
COLEC11 collectin sub-family member 11 -0.0286574
LUC7L2 LUC7-like 2 (S. cerevisiae) -0.0283631
DENND4C DENN/MADD domain containing 4C -0.0282874
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2 -0.0278705
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0275352
SPDYA speedy/RINGO cell cycle regulator family member A -0.0274392
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0274227
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0274206
NIPBL Nipped-B homolog (Drosophila) -0.027276
RPL28 ribosomal protein L28 -0.0268948
VCL vinculin -0.0268141
TMEM41B transmembrane protein 41B -0.0261428
FNDC3B fibronectin type III domain containing 3B -0.025941
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0257572
WTAP Wilms tumor 1 associated protein -0.0257198
ANO10 anoctamin 10 -0.0256875
POT1 protection of telomeres 1 -0.0254718
GOLGA4 golgin A4 -0.0254688
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0254246
RPL31 ribosomal protein L31 -0.0252101
PDIA6 protein disulfide isomerase family A, member 6 -0.0251482