Medroxyprogesterone acetate_hTERT-HPNE Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Medroxyprogesterone acetate perturbation in hTERT-HPNE cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Medroxyprogesterone acetate_hTERT-HPNE drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.469397
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.160545
COL6A3 collagen, type VI, alpha 3 0.140046
AKAP12 A kinase (PRKA) anchor protein 12 0.12263
NALF1 NALCN channel auxiliary factor 1 0.104188
TGFBI transforming growth factor, beta-induced, 68kDa 0.100891
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.100399
HMGA2 high mobility group AT-hook 2 0.0930828
MYO10 myosin X 0.0812676
COL6A1 collagen, type VI, alpha 1 0.0759968
COL6A2 collagen, type VI, alpha 2 0.0744979
PRKG1 protein kinase, cGMP-dependent, type I 0.0663798
HIPK2 homeodomain interacting protein kinase 2 0.0626252
NAV1 neuron navigator 1 0.0505784
GLIS3 GLIS family zinc finger 3 0.0503704
LTBP1 latent transforming growth factor beta binding protein 1 0.0495494
LOXL2 lysyl oxidase-like 2 0.0466324
EGFR epidermal growth factor receptor 0.045668
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0450471
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0447219
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0429082
CD44 CD44 molecule (Indian blood group) 0.0416842
LIMS1 LIM and senescent cell antigen-like domains 1 0.0388218
CD59 CD59 molecule, complement regulatory protein 0.0383301
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0374637
JARID2 jumonji, AT rich interactive domain 2 0.0372936
EEF1G eukaryotic translation elongation factor 1 gamma 0.0365443
TRIO trio Rho guanine nucleotide exchange factor 0.0361174
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 0.03565
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.035025
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0341457
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0340677
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.033609
CXCL8 chemokine (C-X-C motif) ligand 8 0.0330662
LOX lysyl oxidase 0.0307405
PDE4D phosphodiesterase 4D, cAMP-specific 0.0278493
ASPH aspartate beta-hydroxylase 0.0277471
ARHGAP22 Rho GTPase activating protein 22 0.0271011
LDHA lactate dehydrogenase A 0.0264611
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0262911
ACTG1 actin gamma 1 0.0256034
HLA-B major histocompatibility complex, class I, B 0.024898
MMP2 matrix metallopeptidase 2 0.0248308
EEF2 eukaryotic translation elongation factor 2 0.0247757
PDIA3 protein disulfide isomerase family A, member 3 0.0247381
FRMD4A FERM domain containing 4A 0.0244804
PGK1 phosphoglycerate kinase 1 0.0239325
OXR1 oxidation resistance 1 0.0238462
SFTPA2 surfactant protein A2 0.0237102
ATP13A3 ATPase type 13A3 0.0233747
RAI14 retinoic acid induced 14 0.0228744
INHBA inhibin, beta A 0.0227826
NFE2L1 nuclear factor, erythroid 2-like 1 0.0220959
COL1A1 collagen, type I, alpha 1 0.0218506
PRR16 proline rich 16 0.0216063
CDH13 cadherin 13 0.0214701
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.0213293
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0210822
ADGRB3 adhesion G protein-coupled receptor B3 0.0210755
NRP1 neuropilin 1 0.020897
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0204895
SPRED2 sprouty-related, EVH1 domain containing 2 0.0193781
CAVIN1 caveolae associated protein 1 0.0192806
TIMP2 TIMP metallopeptidase inhibitor 2 0.0192649
FRMD6 FERM domain containing 6 0.0191743
NPAS2 neuronal PAS domain protein 2 0.0190754
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0186035
EMP1 epithelial membrane protein 1 0.0182857
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0181684
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 0.0181488
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 0.0181359
NOTCH2 notch 2 0.0180985
CEMIP cell migration inducing protein, hyaluronan binding 0.0179334
SAMD3 sterile alpha motif domain containing 3 0.0177339
RUNX1 runt-related transcription factor 1 0.0174279
ABI3BP ABI family, member 3 (NESH) binding protein 0.0174049
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0173738
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0173663
EGR1 early growth response 1 0.0166037
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0165826
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0164066
FBN1 fibrillin 1 0.0162856
MYADM myeloid-associated differentiation marker 0.0162213
FNDC3A fibronectin type III domain containing 3A 0.0160785
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0158539
OSMR oncostatin M receptor 0.015582
ADAMTSL1 ADAMTS-like 1 0.0155592
HAS2 hyaluronan synthase 2 0.0155145
CLMP CXADR-like membrane protein 0.0153359
POTEF POTE ankyrin domain family, member F 0.0152493
PLEC plectin 0.0151271
LOC112694756 uncharaterized LOC112694756 0.0148351
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0148008
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0147683
MCL1 myeloid cell leukemia 1 0.0146876
FTH1 ferritin, heavy polypeptide 1 0.0146376
ITGA11 integrin, alpha 11 0.0144574
ANO6 anoctamin 6 0.0143801
MYO1B myosin IB 0.0142606
ARB2A ARB2 cotranscriptional regulator A 0.0138405

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.174408
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.132229
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0721625
FTL ferritin, light polypeptide -0.0630688
TMSB10 thymosin beta 10 -0.0604186
GOLGA4 golgin A4 -0.0543544
PTMA prothymosin, alpha -0.0543447
SPAG9 sperm associated antigen 9 -0.0425713
MT2A metallothionein 2A -0.039051
ADM adrenomedullin -0.0382877
STC1 stanniocalcin 1 -0.0359668
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0358853
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0317469
ARHGAP21 Rho GTPase activating protein 21 -0.0297928
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0293517
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0287309
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0286731
ALCAM activated leukocyte cell adhesion molecule -0.0280693
SOD2 superoxide dismutase 2, mitochondrial -0.0278466
EIF1 eukaryotic translation initiation factor 1 -0.0269932
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0264819
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0252969
RBM39 RNA binding motif protein 39 -0.0249875
CALR calreticulin -0.0240878
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0240404
BIRC6 baculoviral IAP repeat containing 6 -0.0236415
HDLBP high density lipoprotein binding protein -0.0236363
HELZ helicase with zinc finger -0.0230524
OGA O-GlcNAcase -0.0230151
HILPDA hypoxia inducible lipid droplet-associated -0.0225812
USP3 ubiquitin specific peptidase 3 -0.0224215
LCORL ligand dependent nuclear receptor corepressor-like -0.0220097
MORF4L2 mortality factor 4 like 2 -0.0218854
CALU calumenin -0.0218525
COL4A2 collagen, type IV, alpha 2 -0.0217956
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0213721
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0211123
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0210278
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0210027
RPL31 ribosomal protein L31 -0.0207956
CANX calnexin -0.0207761
KDM3A lysine (K)-specific demethylase 3A -0.0205808
RRBP1 ribosome binding protein 1 -0.0203867
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.020001
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0197868
LMNA lamin A/C -0.0192665
NPEPPS aminopeptidase puromycin sensitive -0.0187701
PRRC2C proline-rich coiled-coil 2C -0.018542
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0184615
RNMT RNA (guanine-7-) methyltransferase -0.0183696
YBX3 Y box binding protein 3 -0.0183193
PTBP3 polypyrimidine tract binding protein 3 -0.0182482
YBX1 Y box binding protein 1 -0.0182084
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0181041
PFN1 profilin 1 -0.0180511
RPS6 ribosomal protein S6 -0.0180242
COPA coatomer protein complex, subunit alpha -0.0178691
NAP1L1 nucleosome assembly protein 1-like 1 -0.0176291
COG5 component of oligomeric golgi complex 5 -0.0175255
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0174475
DSCAM Down syndrome cell adhesion molecule -0.01734
GARS1 glycyl-tRNA synthetase 1 -0.0171153
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0169834
SEC31A SEC31 homolog A (S. cerevisiae) -0.0167759
PHIP pleckstrin homology domain interacting protein -0.0167631
MMP1 matrix metallopeptidase 1 -0.0166439
SEC23A Sec23 homolog A (S. cerevisiae) -0.0165773
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0162745
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0161942
NUP58 nucleoporin 58 -0.0159097
MXI1 MAX interactor 1, dimerization protein -0.015765
RPL26 ribosomal protein L26 -0.0157083
RPS12 ribosomal protein S12 -0.0156907
NBAS neuroblastoma amplified sequence -0.0156736
TBC1D23 TBC1 domain family, member 23 -0.0156706
SQSTM1 sequestosome 1 -0.0156091
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0155863
CLINT1 clathrin interactor 1 -0.0155116
SRGN serglycin -0.0154929
NKTR natural killer cell triggering receptor -0.0154898
SRP54 signal recognition particle 54kDa -0.0154665
RSF1 remodeling and spacing factor 1 -0.0153925
RPS17 ribosomal protein S17 -0.0153839
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.015291
NDRG1 N-myc downstream regulated 1 -0.015281
RPS8 ribosomal protein S8 -0.0152727
FGFR1 fibroblast growth factor receptor 1 -0.015269
NAMPT nicotinamide phosphoribosyltransferase -0.0152613
GNAS GNAS complex locus -0.0151095
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0150748
LIMCH1 LIM and calponin homology domains 1 -0.0150699
ZC3H11A zinc finger CCCH-type containing 11A -0.0149928
NAV2 neuron navigator 2 -0.0148865
WAC WW domain containing adaptor with coiled-coil -0.0148517
KMT2C lysine (K)-specific methyltransferase 2C -0.0148143
SEC24D SEC24 family member D -0.0147119
SUCO SUN domain containing ossification factor -0.01471
RPL5 ribosomal protein L5 -0.0146993
RPS3 ribosomal protein S3 -0.0146754
COPB1 coatomer protein complex, subunit beta 1 -0.0146447