Methylprednisolone succinate_J82 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Methylprednisolone succinate perturbation in J82 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Methylprednisolone succinate_J82 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
P4HB prolyl 4-hydroxylase, beta polypeptide 0.086701
POTEF POTE ankyrin domain family, member F 0.0809477
TRIO trio Rho guanine nucleotide exchange factor 0.0792849
B2M beta-2-microglobulin 0.0786518
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0780714
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.076178
FLNB filamin B, beta 0.0705771
CALR calreticulin 0.0633803
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0605159
MSN moesin 0.0558093
PKM pyruvate kinase, muscle 0.0538615
UBA6 ubiquitin-like modifier activating enzyme 6 0.0538249
VEGFA vascular endothelial growth factor A 0.0524341
PCBP2 poly(rC) binding protein 2 0.0507247
FN1 fibronectin 1 0.0503434
FTH1 ferritin, heavy polypeptide 1 0.048633
MYH9 myosin, heavy chain 9, non-muscle 0.0479817
TPM3 tropomyosin 3 0.0477433
NAV2 neuron navigator 2 0.0476703
MT2A metallothionein 2A 0.0451713
ENO1 enolase 1, (alpha) 0.0433764
FNDC3B fibronectin type III domain containing 3B 0.04274
APLP2 amyloid beta (A4) precursor-like protein 2 0.0409648
L1CAM L1 cell adhesion molecule 0.0395821
KTN1 kinectin 1 (kinesin receptor) 0.0388566
UGCG UDP-glucose ceramide glucosyltransferase 0.0383586
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0376028
BRD2 bromodomain containing 2 0.0373954
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0371735
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.036446
NCOR2 nuclear receptor corepressor 2 0.036062
SET SET nuclear proto-oncogene 0.035885
PTMA prothymosin, alpha 0.0357873
SLC12A8 solute carrier family 12, member 8 0.0353721
KDM6A lysine (K)-specific demethylase 6A 0.0352385
ADAM9 ADAM metallopeptidase domain 9 0.0351926
INTS6 integrator complex subunit 6 0.0351741
KMT2E lysine (K)-specific methyltransferase 2E 0.0349624
RPS12 ribosomal protein S12 0.0348575
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0339573
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0336209
SEPTIN9 septin 9 0.0335837
ADM adrenomedullin 0.0334485
SFTPA2 surfactant protein A2 0.0309844
STC2 stanniocalcin 2 0.0303854
SOD2 superoxide dismutase 2, mitochondrial 0.0303683
SRRM2 serine/arginine repetitive matrix 2 0.0300401
HLA-A major histocompatibility complex, class I, A 0.0298045
SDK1 sidekick cell adhesion molecule 1 0.0297465
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0296526
FOSL1 FOS-like antigen 1 0.0295508
PLIN2 perilipin 2 0.0295109
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.029424
ANXA1 annexin A1 0.0294215
MCL1 myeloid cell leukemia 1 0.0293523
RPL37A ribosomal protein L37a 0.0293454
RAB6A RAB6A, member RAS oncogene family 0.0292794
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0288801
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0284601
RPS3 ribosomal protein S3 0.028438
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0278554
NUP58 nucleoporin 58 0.027821
FAM219A family with sequence similarity 219, member A 0.0277951
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0275957
ENO2 enolase 2 (gamma, neuronal) 0.0275866
CEP250 centrosomal protein 250kDa 0.0272397
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0267763
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.026573
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0265299
TNIP1 TNFAIP3 interacting protein 1 0.0264774
PLEC plectin 0.0263464
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0258109
COL5A1 collagen, type V, alpha 1 0.0252779
ASPH aspartate beta-hydroxylase 0.0252251
TIMP2 TIMP metallopeptidase inhibitor 2 0.025018
BHLHE40 basic helix-loop-helix family, member e40 0.0246374
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0245217
DTNA dystrobrevin, alpha 0.0242742
CCNL1 cyclin L1 0.0239182
YEATS2 YEATS domain containing 2 0.0237074
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0235889
DST dystonin 0.0227094
DIPK2A divergent protein kinase domain 2A 0.0226327
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0225299
MBNL1 muscleblind-like splicing regulator 1 0.0225163
WNK1 WNK lysine deficient protein kinase 1 0.0223943
PDE10A phosphodiesterase 10A 0.0222294
ZFP36L1 ZFP36 ring finger protein-like 1 0.0221077
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0219984
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0218427
INSIG2 insulin induced gene 2 0.0216144
NOTCH2 notch 2 0.021596
RPL7 ribosomal protein L7 0.0214745
ARF4 ADP-ribosylation factor 4 0.0214039
EEF1G eukaryotic translation elongation factor 1 gamma 0.0213428
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0213015
YBX1 Y box binding protein 1 0.0211059
KMT2C lysine (K)-specific methyltransferase 2C 0.0209229
PICALM phosphatidylinositol binding clathrin assembly protein 0.0206396
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0206164

decreased expression

Symbol Name Standardized Value
EXT1 exostosin glycosyltransferase 1 -0.113965
MT1X metallothionein 1X -0.10997
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.105584
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.101666
CD44 CD44 molecule (Indian blood group) -0.0880588
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0814987
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0790899
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0601159
CAVIN1 caveolae associated protein 1 -0.0576261
OSMR oncostatin M receptor -0.0483427
NAMPT nicotinamide phosphoribosyltransferase -0.0482553
ZNF432 zinc finger protein 432 -0.0465279
TXNRD1 thioredoxin reductase 1 -0.0461359
AHNAK AHNAK nucleoprotein -0.0438953
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0434445
ACTG1 actin gamma 1 -0.0425487
HLA-C major histocompatibility complex, class I, C -0.0402172
MARCKS myristoylated alanine-rich protein kinase C substrate -0.037392
RAB7A RAB7A, member RAS oncogene family -0.0347399
LOC112694756 uncharaterized LOC112694756 -0.0339362
IER3 immediate early response 3 -0.0329643
F3 coagulation factor III (thromboplastin, tissue factor) -0.0327021
KLF7 Kruppel-like factor 7 (ubiquitous) -0.03257
DEK DEK proto-oncogene -0.0322631
TMSB4X thymosin beta 4, X-linked -0.0320134
RHOBTB3 Rho-related BTB domain containing 3 -0.0317967
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.03122
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0295207
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0288374
PLSCR1 phospholipid scramblase 1 -0.0286889
LMAN1 lectin, mannose-binding, 1 -0.0286027
RRBP1 ribosome binding protein 1 -0.0277115
ARF1 ADP-ribosylation factor 1 -0.0270403
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0264928
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0260525
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0259502
CCND1 cyclin D1 -0.0258008
PRRC2B proline-rich coiled-coil 2B -0.0251578
LAMP1 lysosomal-associated membrane protein 1 -0.0249818
PLCB4 phospholipase C, beta 4 -0.0247036
ABI3BP ABI family, member 3 (NESH) binding protein -0.0246018
GLIS3 GLIS family zinc finger 3 -0.0239779
BZW1 basic leucine zipper and W2 domains 1 -0.0238163
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 -0.0238128
TUBB tubulin, beta class I -0.0231674
ANKLE2 ankyrin repeat and LEM domain containing 2 -0.0229216
EGR1 early growth response 1 -0.0228254
IARS1 isoleucyl-tRNA synthetase 1 -0.0227793
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0225356
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0223814
TMSB10 thymosin beta 10 -0.022225
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0215137
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B -0.0213585
NALF1 NALCN channel auxiliary factor 1 -0.021297
LOX lysyl oxidase -0.0212532
HMGB1 high mobility group box 1 -0.0210818
SENP5 SUMO1/sentrin specific peptidase 5 -0.0209414
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0204175
RAD21 RAD21 homolog (S. pombe) -0.0202577
EMP1 epithelial membrane protein 1 -0.0202449
TAS2R14 taste receptor, type 2, member 14 -0.0196687
FUS FUS RNA binding protein -0.0196346
NF1 neurofibromin 1 -0.0196268
MORF4L2 mortality factor 4 like 2 -0.0194436
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.019272
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0192004
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0190825
GOLGA3 golgin A3 -0.0188695
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0187396
H1-4 H1.4 linker histone, cluster member -0.0185647
POSTN periostin, osteoblast specific factor -0.0184547
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0181475
TLK1 tousled-like kinase 1 -0.0179564
ERBIN erbb2 interacting protein -0.0179029
CBX3 chromobox homolog 3 -0.0178333
MAPK8 mitogen-activated protein kinase 8 -0.017744
COL4A2 collagen, type IV, alpha 2 -0.0176393
CDK12 cyclin-dependent kinase 12 -0.0175736
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0175429
MYL12B myosin, light chain 12B, regulatory -0.0172908
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0172462
COL12A1 collagen, type XII, alpha 1 -0.0169867
GOLT1B golgi transport 1B -0.0169602
RNF168 ring finger protein 168, E3 ubiquitin protein ligase -0.0169262
DIAPH3 diaphanous-related formin 3 -0.016839
TARS1 threonyl-tRNA synthetase 1 -0.0167583
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0167351
VCL vinculin -0.0166644
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0166234
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa -0.0166118
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0166105
ZMYND8 zinc finger, MYND-type containing 8 -0.0164812
STK4 serine/threonine kinase 4 -0.0164071
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0163852
MTAP methylthioadenosine phosphorylase -0.0163839
VDAC1 voltage-dependent anion channel 1 -0.0163574
RAB1B RAB1B, member RAS oncogene family -0.0163126
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0163095
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0162929
ZNF43 zinc finger protein 43 -0.0160126