Methylthiouracil_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Methylthiouracil perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Methylthiouracil_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
APOB apolipoprotein B 0.0847764
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0634854
C3 complement component 3 0.0609723
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0538122
EEF2 eukaryotic translation elongation factor 2 0.0538042
FBF1 Fas (TNFRSF6) binding factor 1 0.053321
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0439205
AHSG alpha-2-HS-glycoprotein 0.0428044
RPL11 ribosomal protein L11 0.040148
FNDC3B fibronectin type III domain containing 3B 0.0400031
VEGFA vascular endothelial growth factor A 0.0382281
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0344347
DDIT4 DNA-damage-inducible transcript 4 0.0337038
ERRFI1 ERBB receptor feedback inhibitor 1 0.0329292
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.032412
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0316272
A2M alpha-2-macroglobulin 0.0315333
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0310546
RPS6 ribosomal protein S6 0.0301662
RPS12 ribosomal protein S12 0.0298607
RPS8 ribosomal protein S8 0.0297541
RPL37A ribosomal protein L37a 0.0284913
SOD2 superoxide dismutase 2, mitochondrial 0.0282557
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0265571
TF transferrin 0.0260295
TRIM26 tripartite motif containing 26 0.0254705
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0250841
CALR calreticulin 0.0248794
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0248235
PTPRM protein tyrosine phosphatase, receptor type, M 0.0247934
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0246691
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0240995
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0240102
GOLGA4 golgin A4 0.0235659
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.023401
BHLHE40 basic helix-loop-helix family, member e40 0.0232302
NAP1L1 nucleosome assembly protein 1-like 1 0.02245
MAN1A1 mannosidase, alpha, class 1A, member 1 0.022125
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.0215019
QKI QKI, KH domain containing, RNA binding 0.02124
RPL5 ribosomal protein L5 0.0211707
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0205757
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0205095
RBM39 RNA binding motif protein 39 0.0204883
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0204458
PCBP2 poly(rC) binding protein 2 0.0204394
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.020306
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0202883
FTL ferritin, light polypeptide 0.0200796
CPE carboxypeptidase E 0.0200742
RPS3 ribosomal protein S3 0.0199442
CRY1 cryptochrome circadian clock 1 0.0197477
RACK1 receptor for activated C kinase 1 0.0195972
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 0.0194791
SDC4 syndecan 4 0.0191226
TPT1 tumor protein, translationally-controlled 1 0.0189972
FTH1 ferritin, heavy polypeptide 1 0.0189318
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0188884
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0186774
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0179324
AFDN afadin, adherens junction formation factor 0.01792
ZFAND3 zinc finger, AN1-type domain 3 0.017894
RPL3 ribosomal protein L3 0.0176107
CFB complement factor B 0.0175938
SIK3 SIK family kinase 3 0.0175097
RPL9 ribosomal protein L9 0.0173834
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0171766
RPL31 ribosomal protein L31 0.0171461
EPS8 epidermal growth factor receptor pathway substrate 8 0.016843
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0166507
CAMTA1 calmodulin binding transcription activator 1 0.0166105
KRT8 keratin 8, type II 0.0164701
RPS27A ribosomal protein S27a 0.0161805
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0161023
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0160248
RPL7A ribosomal protein L7a 0.0157521
DTNA dystrobrevin, alpha 0.015661
MYO1B myosin IB 0.0152658
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0151353
RPL23 ribosomal protein L23 0.0151292
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.014952
RPLP0 ribosomal protein, large, P0 0.0148741
CCN2 cellular communication network factor 2 0.0148282
RPS14 ribosomal protein S14 0.0145942
RPS13 ribosomal protein S13 0.01437
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0143695
EIF1 eukaryotic translation initiation factor 1 0.0143431
RPS24 ribosomal protein S24 0.0143288
EIF4B eukaryotic translation initiation factor 4B 0.0141545
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.014134
MED13L mediator complex subunit 13-like 0.0140854
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0140699
RPL34 ribosomal protein L34 0.0139711
KMT2C lysine (K)-specific methyltransferase 2C 0.0139577
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0139391
NDRG1 N-myc downstream regulated 1 0.0138894
GRK3 G protein-coupled receptor kinase 3 0.0138427
SESTD1 SEC14 and spectrin domains 1 0.0138018
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0137888
OLA1 Obg-like ATPase 1 0.0137768

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.192555
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.116092
IGF2 insulin-like growth factor 2 -0.0985007
EHBP1 EH domain binding protein 1 -0.0980521
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0825371
MT2A metallothionein 2A -0.074242
GPC6 glypican 6 -0.0701305
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0667037
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0611343
FRMD5 FERM domain containing 5 -0.0567185
MAML2 mastermind-like 2 (Drosophila) -0.0461119
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0445107
NPAS2 neuronal PAS domain protein 2 -0.040987
ASPH aspartate beta-hydroxylase -0.0381084
DST dystonin -0.0363967
ZBTB20 zinc finger and BTB domain containing 20 -0.0363369
ZMYND8 zinc finger, MYND-type containing 8 -0.0322793
TMSB10 thymosin beta 10 -0.0316856
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0297679
GMDS GDP-mannose 4,6-dehydratase -0.029682
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0296522
RNF213 ring finger protein 213 -0.0279847
ATXN1 ataxin 1 -0.0275548
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0271996
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0271169
RIGI RNA sensor RIG-I -0.0269079
ATP10A ATPase, class V, type 10A -0.0263989
FERMT1 fermitin family member 1 -0.0244829
RUNX1 runt-related transcription factor 1 -0.0229874
CP ceruloplasmin (ferroxidase) -0.0221747
VCL vinculin -0.0211031
ITGA1 integrin, alpha 1 -0.0210244
IGFBP1 insulin-like growth factor binding protein 1 -0.0201633
PTCHD4 patched domain containing 4 -0.0200508
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0194986
OSMR oncostatin M receptor -0.0194035
DOCK4 dedicator of cytokinesis 4 -0.0193063
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0191499
TM4SF1 transmembrane 4 L six family member 1 -0.0184306
TPM4 tropomyosin 4 -0.0179203
FOXP1 forkhead box P1 -0.0176872
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0169983
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0168852
MX2 MX dynamin-like GTPase 2 -0.0165451
RNASET2 ribonuclease T2 -0.0165057
ENO1 enolase 1, (alpha) -0.01621
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0161008
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0157592
SOX4 SRY (sex determining region Y)-box 4 -0.0156615
GRB10 growth factor receptor-bound protein 10 -0.0153117
RAI14 retinoic acid induced 14 -0.0150456
CNKSR3 CNKSR family member 3 -0.0150434
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0148403
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.014532
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.014504
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 -0.014502
ENKUR enkurin, TRPC channel interacting protein -0.0144706
NHSL1 NHS-like 1 -0.0140937
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0139544
AHNAK AHNAK nucleoprotein -0.0136448
PEG3 paternally expressed 3 -0.0135447
BCAR3 breast cancer anti-estrogen resistance 3 -0.0133536
PDGFB platelet-derived growth factor beta polypeptide -0.013311
VCAN versican -0.0132428
LOC112694756 uncharaterized LOC112694756 -0.0131904
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.012985
ZNFX1 zinc finger, NFX1-type containing 1 -0.0127704
MT1X metallothionein 1X -0.0125708
TMEM45B transmembrane protein 45B -0.0124432
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0122422
IFIH1 interferon induced with helicase C domain 1 -0.012139
ARHGAP18 Rho GTPase activating protein 18 -0.0120607
TMEM123 transmembrane protein 123 -0.0119621
GLIPR1 GLI pathogenesis-related 1 -0.0118975
ZSWIM5 zinc finger, SWIM-type containing 5 -0.0116304
IFI6 interferon, alpha-inducible protein 6 -0.0115913
SVIL supervillin -0.0115748
HMGA1 high mobility group AT-hook 1 -0.0114959
IFITM1 interferon induced transmembrane protein 1 -0.0113899
HMGA2 high mobility group AT-hook 2 -0.0112513
ACTN1 actinin, alpha 1 -0.0112182
FILIP1L filamin A interacting protein 1-like -0.0112166
KIAA1217 KIAA1217 -0.0111253
BCL2L1 BCL2-like 1 -0.0110903
ABTB3 ankyrin repeat and BTB domain containing 3 -0.0110753
RASA2 RAS p21 protein activator 2 -0.0109878
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0109487
H1-0 H1.0 linker histone -0.0107826
BMERB1 bMERB domain containing 1 -0.0107194
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0106837
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0106789
ITGB5 integrin, beta 5 -0.0106137
PERP PERP, TP53 apoptosis effector -0.0106116
SOX5 SRY (sex determining region Y)-box 5 -0.0104568
PRKCA protein kinase C, alpha -0.0104485
SLF2 SMC5-SMC6 complex localization factor 2 -0.0104282
MAP1B microtubule-associated protein 1B -0.0103721
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0103618
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0103504
RAB3B RAB3B, member RAS oncogene family -0.0103021