Methylthiouracil_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Methylthiouracil perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Methylthiouracil_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.149282
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.111388
HDAC9 histone deacetylase 9 0.109815
ZNF292 zinc finger protein 292 0.106999
COL5A2 collagen, type V, alpha 2 0.104534
PEG10 paternally expressed 10 0.0978706
PTMA prothymosin, alpha 0.0974172
COL11A1 collagen, type XI, alpha 1 0.0953661
ZFAND3 zinc finger, AN1-type domain 3 0.0890397
PDGFC platelet derived growth factor C 0.0842977
ZEB2 zinc finger E-box binding homeobox 2 0.0806681
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0779458
CXADR coxsackie virus and adenovirus receptor 0.0775549
PGAP1 post-GPI attachment to proteins 1 0.076178
ANKRD33B ankyrin repeat domain 33B 0.0760935
CALR calreticulin 0.0750882
THBS1 thrombospondin 1 0.0721107
POTEF POTE ankyrin domain family, member F 0.0714511
TSC22D2 TSC22 domain family, member 2 0.0676217
PHIP pleckstrin homology domain interacting protein 0.0662864
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0659769
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0648775
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0637073
ADAM9 ADAM metallopeptidase domain 9 0.0635445
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0631121
FBXO11 F-box protein 11 0.0629489
MKI67 marker of proliferation Ki-67 0.0609097
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0607581
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0602953
TRIO trio Rho guanine nucleotide exchange factor 0.0595839
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0584513
ITGAV integrin, alpha V 0.0583265
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0565398
FNDC3B fibronectin type III domain containing 3B 0.0561338
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0560911
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0560145
KDM3A lysine (K)-specific demethylase 3A 0.055706
JMJD1C jumonji domain containing 1C 0.0556135
DST dystonin 0.0555569
ZNF217 zinc finger protein 217 0.0552404
ENAH enabled homolog (Drosophila) 0.0549045
ADGRL2 adhesion G protein-coupled receptor L2 0.0548551
RBM39 RNA binding motif protein 39 0.0538824
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0534219
VIM vimentin 0.0527069
TRPS1 trichorhinophalangeal syndrome I 0.0524689
EEF2 eukaryotic translation elongation factor 2 0.0521816
APP amyloid beta (A4) precursor protein 0.0513145
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0508813
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.050821
SRP54 signal recognition particle 54kDa 0.049256
ACTG1 actin gamma 1 0.048943
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0482772
RDX radixin 0.0478406
OSBPL9 oxysterol binding protein-like 9 0.0474205
MYO10 myosin X 0.0472106
EMP1 epithelial membrane protein 1 0.0471011
MRPS30 mitochondrial ribosomal protein S30 0.0470668
QKI QKI, KH domain containing, RNA binding 0.0469045
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0468288
PDS5B PDS5 cohesin associated factor B 0.0463564
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0461019
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0460026
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0459383
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0453641
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0447937
SHROOM3 shroom family member 3 0.0446733
SFRP4 secreted frizzled-related protein 4 0.0446011
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0444472
KMT2E lysine (K)-specific methyltransferase 2E 0.043989
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0434161
ATP5F1B ATP synthase F1 subunit beta 0.0431875
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0431839
MB21D2 Mab-21 domain containing 2 0.0430164
TARS1 threonyl-tRNA synthetase 1 0.04301
NCKAP1 NCK-associated protein 1 0.0429546
RASAL2 RAS protein activator like 2 0.0425948
CSDE1 cold shock domain containing E1, RNA-binding 0.0413276
OSBPL8 oxysterol binding protein-like 8 0.0402337
RLF rearranged L-myc fusion 0.0400693
FIP1L1 factor interacting with PAPOLA and CPSF1 0.0397597
USP25 ubiquitin specific peptidase 25 0.0395642
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 0.0394844
FAM171B family with sequence similarity 171, member B 0.0394524
NIPBL Nipped-B homolog (Drosophila) 0.039398
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0393905
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0390622
ANXA1 annexin A1 0.0389929
PLPP1 phospholipid phosphatase 1 0.0387442
RBM20 RNA binding motif protein 20 0.0384106
MYH9 myosin, heavy chain 9, non-muscle 0.0382895
CCN2 cellular communication network factor 2 0.0382057
SPAG9 sperm associated antigen 9 0.0381145
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.0376242
SLC38A2 solute carrier family 38, member 2 0.0373072
GPC4 glypican 4 0.0372822
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0370235
KIF5B kinesin family member 5B 0.0369596
TENM3 teneurin transmembrane protein 3 0.0363806
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0361089

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0407131
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0298865
NEBL nebulette -0.0273876
MRPS6 mitochondrial ribosomal protein S6 -0.0259481
PCDH7 protocadherin 7 -0.0245787
FN1 fibronectin 1 -0.024513
RPS13 ribosomal protein S13 -0.0240902
RPL31 ribosomal protein L31 -0.0220959
CSMD3 CUB and Sushi multiple domains 3 -0.0218201
NPAS3 neuronal PAS domain protein 3 -0.0218177
ASPH aspartate beta-hydroxylase -0.0215518
PSD3 pleckstrin and Sec7 domain containing 3 -0.0215505
NDRG1 N-myc downstream regulated 1 -0.020466
FTL ferritin, light polypeptide -0.0200921
EFNA5 ephrin-A5 -0.0199335
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0189982
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0187672
ATXN1 ataxin 1 -0.018141
SLC44A5 solute carrier family 44, member 5 -0.0179244
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0178103
ABR active BCR-related -0.0177842
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0175318
MBD5 methyl-CpG binding domain protein 5 -0.0174794
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 -0.016827
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0166518
RUNX1 runt-related transcription factor 1 -0.0166368
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.016302
BIRC6 baculoviral IAP repeat containing 6 -0.0162129
RPLP1 ribosomal protein, large, P1 -0.0161384
PDE10A phosphodiesterase 10A -0.016124
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.015675
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0155242
GUK1 guanylate kinase 1 -0.0150741
ANO6 anoctamin 6 -0.01507
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0150649
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 -0.0149088
ZNF638 zinc finger protein 638 -0.014632
RPS25 ribosomal protein S25 -0.0146145
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.0141714
BPTF bromodomain PHD finger transcription factor -0.0141142
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase -0.0140555
WDR45B WD repeat domain 45B -0.0140029
ATP9A ATPase, class II, type 9A -0.0139918
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0139054
NDE1 nudE neurodevelopment protein 1 -0.0138682
RAB6A RAB6A, member RAS oncogene family -0.013812
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0135728
DCAF7 DDB1 and CUL4 associated factor 7 -0.0135674
DLGAP3 discs, large (Drosophila) homolog-associated protein 3 -0.0133658
TRAPPC10 trafficking protein particle complex 10 -0.0133051
BBX bobby sox homolog (Drosophila) -0.0132913
TP53 tumor protein p53 -0.0132538
FST follistatin -0.0132475
SPOP speckle-type POZ protein -0.0132375
SPTSSA serine palmitoyltransferase, small subunit A -0.0132154
ATRN attractin -0.0131586
NPAS2 neuronal PAS domain protein 2 -0.0129347
FBXO27 F-box protein 27 -0.0129317
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.012848
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0127467
MARK4 MAP/microtubule affinity-regulating kinase 4 -0.0127036
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0126798
UBE2V2 ubiquitin-conjugating enzyme E2 variant 2 -0.0125673
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0125094
CUX1 cut-like homeobox 1 -0.0124757
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.012365
LPGAT1 lysophosphatidylglycerol acyltransferase 1 -0.0123309
TM4SF1 transmembrane 4 L six family member 1 -0.0123055
NTNG2 netrin G2 -0.0122917
S100A9 S100 calcium binding protein A9 -0.0122607
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 -0.012227
JAKMIP2 janus kinase and microtubule interacting protein 2 -0.012208
LIMCH1 LIM and calponin homology domains 1 -0.0121714
RPS28 ribosomal protein S28 -0.0119849
PCSK7 proprotein convertase subtilisin/kexin type 7 -0.0119614
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 -0.0119581
RNF149 ring finger protein 149 -0.0119327
STAU1 staufen double-stranded RNA binding protein 1 -0.0119316
ZMAT2 zinc finger, matrin-type 2 -0.0119115
OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF -0.0118827
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0118655
ZBTB20 zinc finger and BTB domain containing 20 -0.0118498
E2F3 E2F transcription factor 3 -0.0117846
IER3 immediate early response 3 -0.0117772
HPCAL1 hippocalcin-like 1 -0.0116967
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0116417
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0116081
ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 -0.0115784
C2ORF42 chromosome 2 open reading frame 42 -0.0115722
FBXO34 F-box protein 34 -0.0115673
SAR1B secretion associated, Ras related GTPase 1B -0.0115352
RPS19 ribosomal protein S19 -0.0114761
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 -0.0113919
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0113667
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0113398
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.0112866
ARHGEF4 Rho guanine nucleotide exchange factor (GEF) 4 -0.0112861
ZBTB44 zinc finger and BTB domain containing 44 -0.0112714
TUBA1A tubulin, alpha 1a -0.0112348
ATP5MJ ATP synthase membrane subunit j -0.0111927