Mifepristone_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mifepristone perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mifepristone_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.165093
COL5A2 collagen, type V, alpha 2 0.125082
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.106248
PEG10 paternally expressed 10 0.0970453
TMSB4X thymosin beta 4, X-linked 0.0900253
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0894135
POTEF POTE ankyrin domain family, member F 0.086925
TOP2A topoisomerase (DNA) II alpha 170kDa 0.085839
CENPF centromere protein F, 350/400kDa 0.0711933
MKI67 marker of proliferation Ki-67 0.0665403
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0664128
ACTG1 actin gamma 1 0.0637478
YBX1 Y box binding protein 1 0.0598007
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.059341
HDAC9 histone deacetylase 9 0.0577373
TPX2 TPX2, microtubule-associated 0.0541614
DST dystonin 0.0529995
TSC22D2 TSC22 domain family, member 2 0.0526322
WDR43 WD repeat domain 43 0.0507193
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.047661
THBS1 thrombospondin 1 0.0462319
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0457663
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0456775
PCBP2 poly(rC) binding protein 2 0.0453036
KIF5B kinesin family member 5B 0.0445524
FBL fibrillarin 0.0442276
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.042882
MYH9 myosin, heavy chain 9, non-muscle 0.0423204
RBM39 RNA binding motif protein 39 0.0422181
MATR3 matrin 3 0.040752
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0407351
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0401609
RPL4 ribosomal protein L4 0.0393028
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0388956
PDE4D phosphodiesterase 4D, cAMP-specific 0.0384615
RPL3 ribosomal protein L3 0.0382821
EIF4A1 eukaryotic translation initiation factor 4A1 0.0382165
FUBP1 far upstream element (FUSE) binding protein 1 0.0380565
FIP1L1 factor interacting with PAPOLA and CPSF1 0.0378208
TPM3 tropomyosin 3 0.0376065
AHNAK AHNAK nucleoprotein 0.0375066
ANKRD33B ankyrin repeat domain 33B 0.0370818
RLF rearranged L-myc fusion 0.0368971
ZFR zinc finger RNA binding protein 0.0361827
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0360488
SFPQ splicing factor proline/glutamine-rich 0.0357846
RTN4 reticulon 4 0.0356671
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0349911
ZNF292 zinc finger protein 292 0.034876
FAT1 FAT atypical cadherin 1 0.0348144
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0346993
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0340231
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.034014
PTMA prothymosin, alpha 0.0338606
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0333532
NOP58 NOP58 ribonucleoprotein 0.0333456
ADAM9 ADAM metallopeptidase domain 9 0.0332072
PDGFC platelet derived growth factor C 0.0326121
PDIA6 protein disulfide isomerase family A, member 6 0.0326022
EIF5AL1 eukaryotic translation initiation factor 5A-like 1 0.0324271
PUM1 pumilio RNA-binding family member 1 0.0322
ANXA1 annexin A1 0.0321294
EZR ezrin 0.0320375
EIF4B eukaryotic translation initiation factor 4B 0.0319998
ZEB2 zinc finger E-box binding homeobox 2 0.0316025
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.0313374
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.0312328
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0310575
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0308852
KPNB1 karyopherin (importin) beta 1 0.0306431
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0306366
RAB2A RAB2A, member RAS oncogene family 0.0306228
LHFPL6 LHFPL tetraspan subfamily member 6 0.0304951
PRRC2C proline-rich coiled-coil 2C 0.0303841
HMGB2 high mobility group box 2 0.0302237
WDR26 WD repeat domain 26 0.0300713
NTM neurotrimin 0.0300373
RAD21 RAD21 homolog (S. pombe) 0.0299352
SET SET nuclear proto-oncogene 0.0298758
NIPBL Nipped-B homolog (Drosophila) 0.0296424
CCNL1 cyclin L1 0.0290973
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0290535
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.029015
PSMD8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 0.0285774
ANXA2 annexin A2 0.0285428
TOP1 topoisomerase (DNA) I 0.0285278
TCEA1 transcription elongation factor A (SII), 1 0.0283832
TXNRD1 thioredoxin reductase 1 0.0283319
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0282926
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0282672
ANLN anillin, actin binding protein 0.0282669
RNF145 ring finger protein 145 0.0282245
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0281988
ATAD2 ATPase family, AAA domain containing 2 0.0281124
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0277673
CHD1 chromodomain helicase DNA binding protein 1 0.0277272
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0276717
SMC4 structural maintenance of chromosomes 4 0.0276012
OGA O-GlcNAcase 0.0275716
ECT2 epithelial cell transforming 2 0.0275231

decreased expression

Symbol Name Standardized Value
CADM2 cell adhesion molecule 2 -0.169067
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.152699
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.151843
COL11A1 collagen, type XI, alpha 1 -0.114149
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.103054
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0979609
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0907581
PCLO piccolo presynaptic cytomatrix protein -0.0873125
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0802191
ADGRL2 adhesion G protein-coupled receptor L2 -0.0773193
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0738435
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0721183
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0712811
NCAM2 neural cell adhesion molecule 2 -0.0697251
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0696928
ADGRV1 adhesion G protein-coupled receptor V1 -0.0640888
PCDH9 protocadherin 9 -0.0595671
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.0583346
B2M beta-2-microglobulin -0.0573584
PHIP pleckstrin homology domain interacting protein -0.0523717
TTC28 tetratricopeptide repeat domain 28 -0.0519583
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0517898
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0473678
ISG15 ISG15 ubiquitin-like modifier -0.0466309
HMCN1 hemicentin 1 -0.0461497
SMYD3 SET and MYND domain containing 3 -0.0434201
NPAS3 neuronal PAS domain protein 3 -0.0432632
RPS6 ribosomal protein S6 -0.0428782
COL1A2 collagen, type I, alpha 2 -0.0422551
RPS16 ribosomal protein S16 -0.0417723
TMSB10 thymosin beta 10 -0.0407883
SREBF2 sterol regulatory element binding transcription factor 2 -0.0406244
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0400668
PCDH7 protocadherin 7 -0.0396165
GNAS GNAS complex locus -0.0380651
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0380627
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0373966
FAM177A1 family with sequence similarity 177, member A1 -0.0368162
WSB1 WD repeat and SOCS box containing 1 -0.0364223
RBM20 RNA binding motif protein 20 -0.0354034
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0353416
RPL35A ribosomal protein L35a -0.034684
KCTD16 potassium channel tetramerization domain containing 16 -0.034585
MDK midkine (neurite growth-promoting factor 2) -0.0344364
HMGA2 high mobility group AT-hook 2 -0.0332756
CUX1 cut-like homeobox 1 -0.0331134
TPT1 tumor protein, translationally-controlled 1 -0.0325489
RCOR1 REST corepressor 1 -0.0324506
HSPB1 heat shock 27kDa protein 1 -0.0323069
SYT1 synaptotagmin I -0.0320883
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0320243
FGF13 fibroblast growth factor 13 -0.0319825
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0318545
INTS6 integrator complex subunit 6 -0.0314807
AKAP9 A kinase (PRKA) anchor protein 9 -0.0312711
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.030859
RAD51B RAD51 paralog B -0.0307113
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0306979
GPC3 glypican 3 -0.0306682
BMPR1A bone morphogenetic protein receptor, type IA -0.0303294
ATXN2 ataxin 2 -0.0298412
BPTF bromodomain PHD finger transcription factor -0.0296814
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0295802
TRPS1 trichorhinophalangeal syndrome I -0.0293306
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0291188
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0290471
PRKD1 protein kinase D1 -0.0286855
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0286461
TBL1X transducin (beta)-like 1X-linked -0.0285907
TRIM2 tripartite motif containing 2 -0.0282305
CSMD3 CUB and Sushi multiple domains 3 -0.0282114
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0281472
MED12L mediator complex subunit 12-like -0.0279878
ATXN1 ataxin 1 -0.0276415
NBEAL1 neurobeachin-like 1 -0.0275877
TNRC6B trinucleotide repeat containing 6B -0.027455
TRIO trio Rho guanine nucleotide exchange factor -0.0273555
LPIN2 lipin 2 -0.0270005
PGK1 phosphoglycerate kinase 1 -0.0266426
PARD3B par-3 family cell polarity regulator beta -0.0266407
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0260991
BRWD1 bromodomain and WD repeat domain containing 1 -0.0258693
DLG1 discs, large homolog 1 (Drosophila) -0.0258553
COL3A1 collagen, type III, alpha 1 -0.0256118
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0255995
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0250797
UBE2H ubiquitin-conjugating enzyme E2H -0.0246601
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0242182
NHSL1 NHS-like 1 -0.023887
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.023847
RPL31 ribosomal protein L31 -0.0237423
ADGRL3 adhesion G protein-coupled receptor L3 -0.0234498
ANK2 ankyrin 2, neuronal -0.0234159
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0233868
CNTN6 contactin 6 -0.0231801
TFRC transferrin receptor -0.0230683
PBX3 pre-B-cell leukemia homeobox 3 -0.0229405
GSE1 Gse1 coiled-coil protein -0.0227698
PRR16 proline rich 16 -0.0225895
MED13L mediator complex subunit 13-like -0.0225495