Mifepristone_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mifepristone perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mifepristone_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.199336
AHNAK AHNAK nucleoprotein 0.169812
PDE4B phosphodiesterase 4B, cAMP-specific 0.125021
POTEF POTE ankyrin domain family, member F 0.113114
ENO1 enolase 1, (alpha) 0.112021
PKM pyruvate kinase, muscle 0.102283
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0968931
RPL3 ribosomal protein L3 0.0948588
ACTG1 actin gamma 1 0.0845146
TMSB4X thymosin beta 4, X-linked 0.0834493
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0799291
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0778122
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0748864
VCL vinculin 0.0745088
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0734091
EEF2 eukaryotic translation elongation factor 2 0.0676907
EZR ezrin 0.0611391
PCBP2 poly(rC) binding protein 2 0.0602564
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0583152
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.058079
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0577045
HDAC9 histone deacetylase 9 0.0534258
TJP1 tight junction protein 1 0.0532789
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0521198
LDHA lactate dehydrogenase A 0.0508812
ENO2 enolase 2 (gamma, neuronal) 0.0503491
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.050292
FOXP1 forkhead box P1 0.0496507
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0487271
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0484325
SET SET nuclear proto-oncogene 0.0468285
CALR calreticulin 0.0441956
NBEA neurobeachin 0.0436868
GLI3 GLI family zinc finger 3 0.0433982
DUSP4 dual specificity phosphatase 4 0.0432916
SOX6 SRY (sex determining region Y)-box 6 0.0428304
EIF4B eukaryotic translation initiation factor 4B 0.0421792
MKI67 marker of proliferation Ki-67 0.0413575
RPS3 ribosomal protein S3 0.0409363
MYO5C myosin VC 0.0399181
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.0388918
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0385814
CENPF centromere protein F, 350/400kDa 0.03855
APLP2 amyloid beta (A4) precursor-like protein 2 0.0381802
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0365681
EIF4A1 eukaryotic translation initiation factor 4A1 0.0362936
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0358953
PDE4D phosphodiesterase 4D, cAMP-specific 0.0357102
EBNA1BP2 EBNA1 binding protein 2 0.0352139
RPS2 ribosomal protein S2 0.0348908
NPAS2 neuronal PAS domain protein 2 0.0341674
RPL4 ribosomal protein L4 0.0339823
DPYD dihydropyrimidine dehydrogenase 0.03396
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.033891
RPS8 ribosomal protein S8 0.032391
PRELID2 PRELI domain containing 2 0.0322759
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0321645
TPM4 tropomyosin 4 0.0306154
ANXA1 annexin A1 0.0305035
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0292656
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0290965
EIF5AL1 eukaryotic translation initiation factor 5A-like 1 0.0290927
GLI2 GLI family zinc finger 2 0.0290422
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0290101
PLXNA1 plexin A1 0.0280618
SMC3 structural maintenance of chromosomes 3 0.0271326
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0265592
SRRM2 serine/arginine repetitive matrix 2 0.0264352
SFPQ splicing factor proline/glutamine-rich 0.0263342
YBX1 Y box binding protein 1 0.0263054
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.025784
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 0.0256699
LOC102724023 ES1 protein homolog, mitochondrial 0.0254907
BRD2 bromodomain containing 2 0.0254839
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0253481
RBM26 RNA binding motif protein 26 0.0253016
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0251402
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0249668
GSE1 Gse1 coiled-coil protein 0.0248514
NFE2L1 nuclear factor, erythroid 2-like 1 0.0247523
TGFBR3 transforming growth factor, beta receptor III 0.024506
GOLGB1 golgin B1 0.0241963
PRSS23 protease, serine, 23 0.0240348
PTPRG protein tyrosine phosphatase, receptor type, G 0.0235153
SERBP1 SERPINE1 mRNA binding protein 1 0.0232603
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0232425
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0228841
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0228679
CSF1 colony stimulating factor 1 (macrophage) 0.0228139
MACROD2 MACRO domain containing 2 0.0227786
HDGF hepatoma-derived growth factor 0.0227286
BMP10 bone morphogenetic protein 10 0.0226183
SMC4 structural maintenance of chromosomes 4 0.0226099
APP amyloid beta (A4) precursor protein 0.0224736
FAT1 FAT atypical cadherin 1 0.0224524
NAV2 neuron navigator 2 0.0224284
ITGA6 integrin, alpha 6 0.022387
TSC22D1 TSC22 domain family, member 1 0.0222202
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0220005
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0219623

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.236411
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.127464
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0915198
RTN4 reticulon 4 -0.0693855
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0649343
TPT1 tumor protein, translationally-controlled 1 -0.0565721
NAMPT nicotinamide phosphoribosyltransferase -0.0550676
RBM39 RNA binding motif protein 39 -0.0503351
KDM3A lysine (K)-specific demethylase 3A -0.0481032
ZNF292 zinc finger protein 292 -0.0472159
ZFAND3 zinc finger, AN1-type domain 3 -0.0466228
GARS1 glycyl-tRNA synthetase 1 -0.0453779
WSB1 WD repeat and SOCS box containing 1 -0.0448235
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0436348
SSBP2 single-stranded DNA binding protein 2 -0.0429682
QKI QKI, KH domain containing, RNA binding -0.0417021
GOLGA4 golgin A4 -0.0415851
CAMTA1 calmodulin binding transcription activator 1 -0.0371767
RLF rearranged L-myc fusion -0.0362076
KMT2E lysine (K)-specific methyltransferase 2E -0.0336528
CDC73 cell division cycle 73 -0.0333217
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0327604
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0318553
NUP58 nucleoporin 58 -0.0312875
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0310223
EML4 echinoderm microtubule associated protein like 4 -0.0303614
PNISR PNN-interacting serine/arginine-rich protein -0.0297709
FBXO11 F-box protein 11 -0.0292685
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0292259
NCKAP1 NCK-associated protein 1 -0.0290869
ZMYM2 zinc finger, MYM-type 2 -0.0288014
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0283756
NCEH1 neutral cholesterol ester hydrolase 1 -0.0283596
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) -0.0281682
IARS1 isoleucyl-tRNA synthetase 1 -0.027927
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0274162
EXT1 exostosin glycosyltransferase 1 -0.0272689
MON2 MON2 homolog (S. cerevisiae) -0.0268203
NF1 neurofibromin 1 -0.0267125
RPL34 ribosomal protein L34 -0.0267068
RHEB Ras homolog enriched in brain -0.0266668
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0264678
TMEM41B transmembrane protein 41B -0.0258046
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0253632
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0252381
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0243729
BRWD1 bromodomain and WD repeat domain containing 1 -0.0242285
PUM2 pumilio RNA-binding family member 2 -0.0230417
ELOVL5 ELOVL fatty acid elongase 5 -0.0229894
COG5 component of oligomeric golgi complex 5 -0.0229734
USP3 ubiquitin specific peptidase 3 -0.0228905
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0228388
TFG TRK-fused gene -0.0223994
RPL35A ribosomal protein L35a -0.0223363
WDR45B WD repeat domain 45B -0.022255
PIAS2 protein inhibitor of activated STAT, 2 -0.0221756
TMEM39A transmembrane protein 39A -0.0219857
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0219221
LIMD1 LIM domains containing 1 -0.0219208
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0214749
AHI1 Abelson helper integration site 1 -0.0210472
CCNL1 cyclin L1 -0.0208615
RPS11 ribosomal protein S11 -0.0207073
TENT4A terminal nucleotidyltransferase 4A -0.0206458
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0205154
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0204369
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0204168
RPS24 ribosomal protein S24 -0.0200849
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0199925
KIF13A kinesin family member 13A -0.0197892
TCF12 transcription factor 12 -0.0197291
RAB1A RAB1A, member RAS oncogene family -0.0196375
HBP1 HMG-box transcription factor 1 -0.01959
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0192194
TLK1 tousled-like kinase 1 -0.0191205
FOXJ3 forkhead box J3 -0.0190965
NBAS neuroblastoma amplified sequence -0.0190603
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 -0.0189678
TMEM123 transmembrane protein 123 -0.0189139
RPS25 ribosomal protein S25 -0.0187557
AGO3 argonaute RISC catalytic component 3 -0.0187244
ANKRD10 ankyrin repeat domain 10 -0.0187195
SREBF2 sterol regulatory element binding transcription factor 2 -0.0186615
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0185172
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3 -0.0183078
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0180728
BIRC6 baculoviral IAP repeat containing 6 -0.0179793
YBX3 Y box binding protein 3 -0.0179401
RASA2 RAS p21 protein activator 2 -0.0178087
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0176697
MRTFA myocardin related transcription factor A -0.0175417
RAB7A RAB7A, member RAS oncogene family -0.0174827
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0173681
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0172415
SPPL3 signal peptide peptidase like 3 -0.0171871
PHF21A PHD finger protein 21A -0.0171693
PCNP PEST proteolytic signal containing nuclear protein -0.0171676
SETD5 SET domain containing 5 -0.0171054
TOP1 topoisomerase (DNA) I -0.0170475
SESN2 sestrin 2 -0.0169966