Mifepristone_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mifepristone perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mifepristone_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PLIN2 perilipin 2 0.509736
FN1 fibronectin 1 0.142925
AKAP12 A kinase (PRKA) anchor protein 12 0.122163
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0907468
FTH1 ferritin, heavy polypeptide 1 0.089438
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0776314
NAMPT nicotinamide phosphoribosyltransferase 0.0772379
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0647437
MYH9 myosin, heavy chain 9, non-muscle 0.0570296
LDHA lactate dehydrogenase A 0.0555869
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0525757
ENO1 enolase 1, (alpha) 0.050788
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0472463
MKI67 marker of proliferation Ki-67 0.045326
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0432034
CENPF centromere protein F, 350/400kDa 0.0428682
PABPC1 poly(A) binding protein, cytoplasmic 1 0.042803
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0413342
YBX1 Y box binding protein 1 0.0376983
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0355785
EIF1 eukaryotic translation initiation factor 1 0.0348215
ERRFI1 ERBB receptor feedback inhibitor 1 0.0345071
VCAN versican 0.0338821
B2M beta-2-microglobulin 0.0332179
MT2A metallothionein 2A 0.0324641
BASP1 brain abundant, membrane attached signal protein 1 0.0322975
RPS12 ribosomal protein S12 0.0319496
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0307799
RPL3 ribosomal protein L3 0.0285977
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0285379
MSN moesin 0.0280408
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0278528
POTEF POTE ankyrin domain family, member F 0.0275471
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0268683
SYAP1 synapse associated protein 1 0.0265339
APLP2 amyloid beta (A4) precursor-like protein 2 0.026117
RB1CC1 RB1-inducible coiled-coil 1 0.0259455
CSDE1 cold shock domain containing E1, RNA-binding 0.0258759
CCNL1 cyclin L1 0.0254294
PTMA prothymosin, alpha 0.0251509
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0251388
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0249906
ANGPTL4 angiopoietin-like 4 0.0240377
RPS3 ribosomal protein S3 0.0237133
EEF2 eukaryotic translation elongation factor 2 0.0236157
C3 complement component 3 0.0234555
UGCG UDP-glucose ceramide glucosyltransferase 0.0234078
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0232786
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0229658
RPL4 ribosomal protein L4 0.0219788
TPM3 tropomyosin 3 0.02186
THBS1 thrombospondin 1 0.0218477
PCBP2 poly(rC) binding protein 2 0.0218061
ANXA1 annexin A1 0.0216948
BZW1 basic leucine zipper and W2 domains 1 0.0213088
RPS2 ribosomal protein S2 0.0212618
EIF4A1 eukaryotic translation initiation factor 4A1 0.0202475
SDC4 syndecan 4 0.020235
TPM4 tropomyosin 4 0.020118
ANLN anillin, actin binding protein 0.0197846
TXNIP thioredoxin interacting protein 0.0197422
ADAR adenosine deaminase, RNA-specific 0.0194503
SET SET nuclear proto-oncogene 0.0191058
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0187913
OPTN optineurin 0.0186821
AHNAK AHNAK nucleoprotein 0.0182427
FLNB filamin B, beta 0.0181821
ACTG1 actin gamma 1 0.0178006
SNX3 sorting nexin 3 0.017721
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0177028
DSTN destrin (actin depolymerizing factor) 0.017685
ANXA5 annexin A5 0.0176245
RPS4X ribosomal protein S4, X-linked 0.0174928
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0174536
EZR ezrin 0.0171984
RPL37A ribosomal protein L37a 0.0171625
EIF4B eukaryotic translation initiation factor 4B 0.0170321
IFITM1 interferon induced transmembrane protein 1 0.0168867
SFTPA2 surfactant protein A2 0.0168619
RPL7 ribosomal protein L7 0.0167259
FAM13A family with sequence similarity 13, member A 0.0166478
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0165658
F2R coagulation factor II (thrombin) receptor 0.0165512
CKAP5 cytoskeleton associated protein 5 0.0164359
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0163955
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0163526
SRRM2 serine/arginine repetitive matrix 2 0.0160202
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.0160026
BCLAF1 BCL2-associated transcription factor 1 0.0159018
MX1 MX dynamin-like GTPase 1 0.0157938
KPNB1 karyopherin (importin) beta 1 0.0157619
CALD1 caldesmon 1 0.0157533
BCL9L B-cell CLL/lymphoma 9-like 0.015729
RTN4 reticulon 4 0.0156995
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0156158
ZMYND8 zinc finger, MYND-type containing 8 0.0156017
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0154894
ITGAV integrin, alpha V 0.0150461
ENO2 enolase 2 (gamma, neuronal) 0.0149647
COL1A2 collagen, type I, alpha 2 0.0148592

decreased expression

Symbol Name Standardized Value
FRMD4A FERM domain containing 4A -0.207039
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.13887
SOD2 superoxide dismutase 2, mitochondrial -0.137474
TRIO trio Rho guanine nucleotide exchange factor -0.136157
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.11569
IER3 immediate early response 3 -0.110762
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.104548
GLIS3 GLIS family zinc finger 3 -0.0989118
CDH13 cadherin 13 -0.0926275
HMGA2 high mobility group AT-hook 2 -0.0826577
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0786684
PDE10A phosphodiesterase 10A -0.0690977
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0690707
IGFBP3 insulin-like growth factor binding protein 3 -0.0682471
COL6A3 collagen, type VI, alpha 3 -0.0680783
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0659684
VIM vimentin -0.062879
INTS6 integrator complex subunit 6 -0.062215
CADM1 cell adhesion molecule 1 -0.0617336
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0606354
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0569855
FRMPD4 FERM and PDZ domain containing 4 -0.0558742
TPT1 tumor protein, translationally-controlled 1 -0.0553496
CD44 CD44 molecule (Indian blood group) -0.0551839
ZSWIM6 zinc finger, SWIM-type containing 6 -0.054972
PTPRK protein tyrosine phosphatase, receptor type, K -0.0547872
ZFAND3 zinc finger, AN1-type domain 3 -0.0521555
HDAC9 histone deacetylase 9 -0.0514618
SDK1 sidekick cell adhesion molecule 1 -0.0508672
SMYD3 SET and MYND domain containing 3 -0.0508027
DST dystonin -0.0463443
EGFR epidermal growth factor receptor -0.0463227
EXT1 exostosin glycosyltransferase 1 -0.04517
UBC ubiquitin C -0.0436551
FNIP1 folliculin interacting protein 1 -0.0435114
NDRG1 N-myc downstream regulated 1 -0.0432277
RAB7A RAB7A, member RAS oncogene family -0.042232
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.042173
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0419409
DIAPH2 diaphanous-related formin 2 -0.0418987
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0418936
SLC35F3 solute carrier family 35, member F3 -0.0418196
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.041115
KYNU kynureninase -0.0409889
HLA-B major histocompatibility complex, class I, B -0.0397492
NABP1 nucleic acid binding protein 1 -0.0392287
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0391344
CCBE1 collagen and calcium binding EGF domains 1 -0.0391069
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0384932
COL5A1 collagen, type V, alpha 1 -0.0383258
MACF1 microtubule-actin crosslinking factor 1 -0.0378588
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0378106
DLG1 discs, large homolog 1 (Drosophila) -0.0375392
AFF3 AF4/FMR2 family, member 3 -0.0374749
RPS24 ribosomal protein S24 -0.0373152
TMEM132D transmembrane protein 132D -0.0369413
ATXN1 ataxin 1 -0.036136
PPARD peroxisome proliferator-activated receptor delta -0.0361268
ASPH aspartate beta-hydroxylase -0.0352821
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0352582
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0342309
NCKAP5 NCK-associated protein 5 -0.0341407
SMAD3 SMAD family member 3 -0.033752
TNS3 tensin 3 -0.0332311
TGFBI transforming growth factor, beta-induced, 68kDa -0.0325674
ABI3BP ABI family, member 3 (NESH) binding protein -0.0323093
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0321597
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0321218
RAI14 retinoic acid induced 14 -0.0320579
FBXL7 F-box and leucine-rich repeat protein 7 -0.0319256
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0318737
TMSB10 thymosin beta 10 -0.0315808
SLC38A2 solute carrier family 38, member 2 -0.0305476
SPDYA speedy/RINGO cell cycle regulator family member A -0.029677
SAMD3 sterile alpha motif domain containing 3 -0.0296437
QKI QKI, KH domain containing, RNA binding -0.0294966
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.029298
LPP LIM domain containing preferred translocation partner in lipoma -0.0291061
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.028903
MLPH melanophilin -0.02886
PRELID2 PRELI domain containing 2 -0.0287705
ERBIN erbb2 interacting protein -0.0285759
MORF4L2 mortality factor 4 like 2 -0.0284393
HLA-E major histocompatibility complex, class I, E -0.0281316
IARS1 isoleucyl-tRNA synthetase 1 -0.027957
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0279397
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0277653
BNC2 basonuclin 2 -0.0276493
FOXO3 forkhead box O3 -0.0274546
NAV2 neuron navigator 2 -0.0272772
CANX calnexin -0.0270015
COL8A1 collagen, type VIII, alpha 1 -0.0268934
ADAM12 ADAM metallopeptidase domain 12 -0.0266326
COL1A1 collagen, type I, alpha 1 -0.0264831
RUNX1 runt-related transcription factor 1 -0.0263625
RPS27A ribosomal protein S27a -0.0261875
TBC1D22A TBC1 domain family, member 22A -0.0260868
PRKCA protein kinase C, alpha -0.0259703
BACE2 beta-site APP-cleaving enzyme 2 -0.0259489
MED13 mediator complex subunit 13 -0.0258564