Minocycline Gene Set

Dataset DeepCoverMOA Drug Mechanisms of Action
Category proteomics
Type drug perturbation
Description A tetracycline analogue having a dimethylamino group at position 7 and lacking the methyl and hydroxy groups at position 5. (Chemical Entities of Biological Interest Ontology, CHEBI_50694)
External Link https://pubchem.ncbi.nlm.nih.gov/compound/54675783
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Genes

200 proteins with high or low expression in Minocycline relative to other proteins from the DeepCoverMOA Drug Mechanisms of Action dataset.

high expression

Symbol Name Standardized Value
TRAPPC5 trafficking protein particle complex 5 0.65
ZNF623 zinc finger protein 623 0.6
PIP prolactin-induced protein 0.59
TRIB3 tribbles pseudokinase 3 0.58
SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 0.58
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 0.56
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2 0.55
SESN2 sestrin 2 0.55
XIRP2 xin actin binding repeat containing 2 0.54
ST5 suppression of tumorigenicity 5 0.53
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1 0.51
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 0.51
ZG16B zymogen granule protein 16B 0.49
PLXNB1 plexin B1 0.49
IFRD1 interferon-related developmental regulator 1 0.49
DALRD3 DALR anticodon binding domain containing 3 0.48
CCSER1 coiled-coil serine-rich protein 1 0.48
ARHGDIB Rho GDP dissociation inhibitor (GDI) beta 0.47
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.46
PPARG peroxisome proliferator-activated receptor gamma 0.46
PSAT1 phosphoserine aminotransferase 1 0.45
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 0.44
NAV2 neuron navigator 2 0.44
ZNF100 zinc finger protein 100 0.44
GTF2A1 general transcription factor IIA, 1, 19/37kDa 0.44
C6ORF62 chromosome 6 open reading frame 62 0.44
POF1B premature ovarian failure, 1B 0.42
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 0.42
MACC1 metastasis associated in colon cancer 1 0.42
GIN1 gypsy retrotransposon integrase 1 0.42
PREX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 0.42
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.41
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 0.41
EGR1 early growth response 1 0.41
OSGIN1 oxidative stress induced growth inhibitor 1 0.41
SLC38A1 solute carrier family 38, member 1 0.41
ELF4 E74-like factor 4 (ets domain transcription factor) 0.41
HOXB9 homeobox B9 0.4
ZFP62 ZFP62 zinc finger protein 0.4
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.4
METTL26 methyltransferase like 26 0.4
AFG1L AFG1 like ATPase 0.4
RC3H1 ring finger and CCCH-type domains 1 0.39
MCTS2P malignant T cell amplified sequence 2, pseudogene 0.39
DHRSX dehydrogenase/reductase (SDR family) X-linked 0.39
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive) 0.38
TIGD2 tigger transposable element derived 2 0.38
B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 0.37
SNAP91 synaptosomal-associated protein, 91kDa 0.37
CEBPB CCAAT/enhancer binding protein (C/EBP), beta 0.37
ZNF658 zinc finger protein 658 0.37
ABHD18 abhydrolase domain containing 18 0.36
PLEKHM1 pleckstrin homology domain containing, family M (with RUN domain) member 1 0.36
UBL7 ubiquitin-like 7 0.36
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.35
RIOK3 RIO kinase 3 0.35
ZSWIM6 zinc finger, SWIM-type containing 6 0.35
MCRIP2 MAPK regulated corepressor interacting protein 2 0.35
NIBAN1 niban apoptosis regulator 1 0.35
VRK1 vaccinia related kinase 1 0.34
SNX33 sorting nexin 33 0.34
C1ORF109 chromosome 1 open reading frame 109 0.34
LRRC8B leucine rich repeat containing 8 family, member B 0.33
AZGP1 alpha-2-glycoprotein 1, zinc-binding 0.33
C15ORF61 chromosome 15 open reading frame 61 0.33
IFFO2 intermediate filament family orphan 2 0.33
ARSB arylsulfatase B 0.33
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 0.33
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.33
FBXL4 F-box and leucine-rich repeat protein 4 0.33
MIER3 mesoderm induction early response 1, family member 3 0.33
RABEP2 rabaptin, RAB GTPase binding effector protein 2 0.32
ERCC8 excision repair cross-complementation group 8 0.32
COL7A1 collagen, type VII, alpha 1 0.32
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.32
PTBP1 polypyrimidine tract binding protein 1 0.32
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.32
DENND5A DENN/MADD domain containing 5A 0.32
MYBPC1 myosin binding protein C, slow type 0.32
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8 0.32
RNF111 ring finger protein 111 0.32
PHGDH phosphoglycerate dehydrogenase 0.31
ANKH ANKH inorganic pyrophosphate transport regulator 0.31
MTIF3 mitochondrial translational initiation factor 3 0.31
THSD4 thrombospondin, type I, domain containing 4 0.31
KIAA1191 KIAA1191 0.31
KMT2B lysine (K)-specific methyltransferase 2B 0.31
TTYH3 tweety family member 3 0.31
MICALL1 MICAL-like 1 0.31
CES2 carboxylesterase 2 0.3
INO80D INO80 complex subunit D 0.3
BBS1 Bardet-Biedl syndrome 1 0.3
FZD2 frizzled class receptor 2 0.3
DST dystonin 0.3
PSPH phosphoserine phosphatase 0.3
FANCC Fanconi anemia, complementation group C 0.3
PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 0.3
CORO2B coronin, actin binding protein, 2B 0.3
PLA2G12A phospholipase A2, group XIIA 0.3
BTBD7 BTB (POZ) domain containing 7 0.3

low expression

Symbol Name Standardized Value
PRDM16 PR domain containing 16 -2.71
EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 -0.91
COA5 cytochrome c oxidase assembly factor 5 -0.91
TTLL4 tubulin tyrosine ligase-like family member 4 -0.84
GPRC5B G protein-coupled receptor, class C, group 5, member B -0.79
CRIP1 cysteine-rich protein 1 (intestinal) -0.77
COA4 cytochrome c oxidase assembly factor 4 homolog (S. cerevisiae) -0.72
HSPA1L heat shock 70kDa protein 1-like -0.69
SEPTIN5 septin 5 -0.69
SET SET nuclear proto-oncogene -0.67
CRADD CASP2 and RIPK1 domain containing adaptor with death domain -0.67
HERC3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 -0.59
CRCP CGRP receptor component -0.59
INPP5J inositol polyphosphate-5-phosphatase J -0.59
MIB2 mindbomb E3 ubiquitin protein ligase 2 -0.58
RPL26 ribosomal protein L26 -0.58
BLOC1S3 biogenesis of lysosomal organelles complex-1, subunit 3 -0.55
HMBOX1 homeobox containing 1 -0.54
TTLL5 tubulin tyrosine ligase-like family member 5 -0.54
ZNF654 zinc finger protein 654 -0.54
KRT8 keratin 8, type II -0.53
ARID5B AT rich interactive domain 5B (MRF1-like) -0.53
SLC19A2 solute carrier family 19 (thiamine transporter), member 2 -0.51
NR1D2 nuclear receptor subfamily 1, group D, member 2 -0.51
ACTN4 actinin, alpha 4 -0.5
UBE2B ubiquitin-conjugating enzyme E2B -0.49
ZNF227 zinc finger protein 227 -0.48
ZDHHC2 zinc finger, DHHC-type containing 2 -0.48
ZSWIM3 zinc finger, SWIM-type containing 3 -0.48
ANKRD36C ankyrin repeat domain 36C -0.47
PET100 PET100 homolog (S. cerevisiae) -0.47
MSLN mesothelin -0.46
JPT1 Jupiter microtubule associated homolog 1 -0.45
B2M beta-2-microglobulin -0.45
DEGS1 delta(4)-desaturase, sphingolipid 1 -0.44
RABAC1 Rab acceptor 1 (prenylated) -0.43
MCTP2 multiple C2 domains, transmembrane 2 -0.43
PDLIM5 PDZ and LIM domain 5 -0.43
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase -0.42
CCDC102A coiled-coil domain containing 102A -0.42
MT-ND5 NADH dehydrogenase, subunit 5 (complex I) -0.42
ZNF239 zinc finger protein 239 -0.42
HEMK1 HemK methyltransferase family member 1 -0.41
NR1H2 nuclear receptor subfamily 1, group H, member 2 -0.41
NDUFB7 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa -0.41
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11 -0.41
ARL4A ADP-ribosylation factor-like 4A -0.41
ZNF428 zinc finger protein 428 -0.41
CENPT centromere protein T -0.4
ZNF362 zinc finger protein 362 -0.4
OSBPL7 oxysterol binding protein-like 7 -0.39
HAPLN3 hyaluronan and proteoglycan link protein 3 -0.39
STOML1 stomatin (EPB72)-like 1 -0.38
ABHD4 abhydrolase domain containing 4 -0.38
TPK1 thiamin pyrophosphokinase 1 -0.37
MRPL52 mitochondrial ribosomal protein L52 -0.37
MT-CO2 cytochrome c oxidase subunit II -0.36
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.36
VKORC1L1 vitamin K epoxide reductase complex, subunit 1-like 1 -0.36
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) -0.36
CLASRP CLK4-associating serine/arginine rich protein -0.36
C9ORF72 chromosome 9 open reading frame 72 -0.35
NDUFS5 NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase) -0.35
FKBP14 FK506 binding protein 14, 22 kDa -0.35
ZNF707 zinc finger protein 707 -0.35
CD58 CD58 molecule -0.35
GATC glutamyl-tRNA(Gln) amidotransferase, subunit C -0.34
HSPA8 heat shock 70kDa protein 8 -0.34
PCSK9 proprotein convertase subtilisin/kexin type 9 -0.34
BDH2 3-hydroxybutyrate dehydrogenase, type 2 -0.34
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa -0.34
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.33
UQCC2 ubiquinol-cytochrome c reductase complex assembly factor 2 -0.33
NOTCH3 notch 3 -0.33
BCORL1 BCL6 corepressor-like 1 -0.33
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.33
PIM3 Pim-3 proto-oncogene, serine/threonine kinase -0.33
TET1 tet methylcytosine dioxygenase 1 -0.33
BCO2 beta-carotene oxygenase 2 -0.32
KMT2C lysine (K)-specific methyltransferase 2C -0.32
NDUFA7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa -0.32
PRELID3B PRELI domain containing 3B -0.32
NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) -0.32
KSR2 kinase suppressor of ras 2 -0.31
COX6C cytochrome c oxidase subunit VIc -0.31
MAGEA12 melanoma antigen family A12 -0.31
REEP3 receptor accessory protein 3 -0.31
COX5B cytochrome c oxidase subunit Vb -0.31
ANKRD10 ankyrin repeat domain 10 -0.3
COMMD9 COMM domain containing 9 -0.3
PPP2R2D protein phosphatase 2, regulatory subunit B, delta -0.3
CLDN3 claudin 3 -0.3
RPS26P11 ribosomal protein S26 pseudogene 11 -0.3
CDK11A cyclin-dependent kinase 11A -0.3
NDUFB4 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa -0.3
ZNF175 zinc finger protein 175 -0.3
OBSL1 obscurin-like 1 -0.3
CEP104 centrosomal protein 104kDa -0.29
DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 -0.29
LMLN leishmanolysin-like (metallopeptidase M8 family) -0.29