Minodronic acid_HEC-1-A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Minodronic acid perturbation in HEC-1-A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Minodronic acid_HEC-1-A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LAMB3 laminin, beta 3 0.133611
MYH9 myosin, heavy chain 9, non-muscle 0.127356
APP amyloid beta (A4) precursor protein 0.106968
SMAD3 SMAD family member 3 0.099962
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0964779
ACTG1 actin gamma 1 0.0962294
PLEC plectin 0.0958772
TMSB4X thymosin beta 4, X-linked 0.0908152
TXNRD1 thioredoxin reductase 1 0.0773545
EEF2 eukaryotic translation elongation factor 2 0.0766017
AHNAK AHNAK nucleoprotein 0.0758664
LAMC2 laminin, gamma 2 0.0672501
MT2A metallothionein 2A 0.0668514
ACTN4 actinin, alpha 4 0.0661724
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0610592
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0593816
SNX9 sorting nexin 9 0.057437
ANLN anillin, actin binding protein 0.0559906
H1-0 H1.0 linker histone 0.0555954
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0542917
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0518694
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.051186
MKI67 marker of proliferation Ki-67 0.0506141
TRIO trio Rho guanine nucleotide exchange factor 0.0488641
SEPTIN9 septin 9 0.0487615
EZR ezrin 0.0484049
ERRFI1 ERBB receptor feedback inhibitor 1 0.048286
WWC1 WW and C2 domain containing 1 0.0482629
KRT7 keratin 7, type II 0.0474735
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0474387
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0466704
IQGAP1 IQ motif containing GTPase activating protein 1 0.0446645
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0444107
H1-4 H1.4 linker histone, cluster member 0.0435266
MACF1 microtubule-actin crosslinking factor 1 0.0434768
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0432419
USP9X ubiquitin specific peptidase 9, X-linked 0.0427872
LAMA4 laminin, alpha 4 0.0425595
B2M beta-2-microglobulin 0.0425224
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0424368
MATR3 matrin 3 0.041963
SFTPA2 surfactant protein A2 0.0415094
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0414749
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0405277
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0400911
CLTC clathrin, heavy chain (Hc) 0.0394648
NPEPPS aminopeptidase puromycin sensitive 0.0389816
HSPA8 heat shock 70kDa protein 8 0.0385968
PRRC2C proline-rich coiled-coil 2C 0.0379711
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0378192
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0377029
ECT2 epithelial cell transforming 2 0.0376889
OGA O-GlcNAcase 0.0371055
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0366595
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.036512
ANXA2 annexin A2 0.0360224
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.03562
CANX calnexin 0.0353481
LMNA lamin A/C 0.035268
MPRIP myosin phosphatase Rho interacting protein 0.0347705
HELZ helicase with zinc finger 0.0346843
YEATS2 YEATS domain containing 2 0.0341259
BHLHE40 basic helix-loop-helix family, member e40 0.0338927
ANXA1 annexin A1 0.0338837
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0336758
KPNB1 karyopherin (importin) beta 1 0.0334385
EMP1 epithelial membrane protein 1 0.0332351
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0331323
PGK1 phosphoglycerate kinase 1 0.0330306
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0329238
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 0.0327923
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 0.03168
APOL1 apolipoprotein L, 1 0.0315963
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0313936
TUBB tubulin, beta class I 0.031347
VCL vinculin 0.0313438
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0308215
FOSL1 FOS-like antigen 1 0.0305238
KDM3A lysine (K)-specific demethylase 3A 0.0303906
WDR45B WD repeat domain 45B 0.0303214
RPLP0 ribosomal protein, large, P0 0.0303137
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0301328
UGCG UDP-glucose ceramide glucosyltransferase 0.030091
LMAN1 lectin, mannose-binding, 1 0.0298796
MACC1 metastasis associated in colon cancer 1 0.0297033
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.0294234
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0292726
YBX3 Y box binding protein 3 0.0289769
EIF4A1 eukaryotic translation initiation factor 4A1 0.0284367
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0282897
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.028166
TPM4 tropomyosin 4 0.0276872
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0276336
SH3KBP1 SH3-domain kinase binding protein 1 0.0272982
PTMA prothymosin, alpha 0.0272689
RNF145 ring finger protein 145 0.0271324
VEZT vezatin, adherens junctions transmembrane protein 0.0270209
KLF6 Kruppel-like factor 6 0.0269353
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0267119
XPO1 exportin 1 0.0266604

decreased expression

Symbol Name Standardized Value
RPS12 ribosomal protein S12 -0.0813991
RPL37A ribosomal protein L37a -0.0650624
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.063951
RAD51B RAD51 paralog B -0.0596519
TMSB10 thymosin beta 10 -0.0553694
ZBTB20 zinc finger and BTB domain containing 20 -0.0547423
INTS6 integrator complex subunit 6 -0.0520607
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0509704
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0494881
RHEX regulator of hemoglobinization and erythroid cell expansion -0.0458715
RPL28 ribosomal protein L28 -0.0454995
FHIT fragile histidine triad -0.0429952
RPS29 ribosomal protein S29 -0.0413316
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0392392
RPL31 ribosomal protein L31 -0.0389808
PRELID2 PRELI domain containing 2 -0.0381521
EGFR epidermal growth factor receptor -0.0370357
MBNL1 muscleblind-like splicing regulator 1 -0.0360691
ADAM32 ADAM metallopeptidase domain 32 -0.035868
CCDC138 coiled-coil domain containing 138 -0.0355633
BICD1 bicaudal D homolog 1 (Drosophila) -0.0347826
RPS17 ribosomal protein S17 -0.0341389
RPL35 ribosomal protein L35 -0.0339425
RPS3 ribosomal protein S3 -0.0333476
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0327901
HMGA2 high mobility group AT-hook 2 -0.0320721
RPLP2 ribosomal protein, large, P2 -0.0320357
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0319834
RPS23 ribosomal protein S23 -0.0317892
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0315662
RPS8 ribosomal protein S8 -0.0312546
RPL9 ribosomal protein L9 -0.0303946
NDUFAF2 NADH dehydrogenase (ubiquinone) complex I, assembly factor 2 -0.0303551
RFC3 replication factor C (activator 1) 3, 38kDa -0.0299024
ENO2 enolase 2 (gamma, neuronal) -0.0291523
PCSK5 proprotein convertase subtilisin/kexin type 5 -0.0291449
TAS2R14 taste receptor, type 2, member 14 -0.0287801
IGFBP3 insulin-like growth factor binding protein 3 -0.0285048
PTPRK protein tyrosine phosphatase, receptor type, K -0.0282254
DLC1 DLC1 Rho GTPase activating protein -0.0279359
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0278481
AGRN agrin -0.02728
MBD5 methyl-CpG binding domain protein 5 -0.0272736
ATXN1 ataxin 1 -0.027094
GPR39 G protein-coupled receptor 39 -0.0267347
RPS25 ribosomal protein S25 -0.0266159
NABP1 nucleic acid binding protein 1 -0.0259899
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0259744
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.025721
RPS13 ribosomal protein S13 -0.0254422
GPATCH2L G patch domain containing 2-like -0.0252811
RPS15 ribosomal protein S15 -0.0250571
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0248759
FTH1 ferritin, heavy polypeptide 1 -0.0247546
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0245598
RPS11 ribosomal protein S11 -0.0243666
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0236884
RTN3 reticulon 3 -0.0235049
FRAS1 Fraser extracellular matrix complex subunit 1 -0.0235043
SLC38A2 solute carrier family 38, member 2 -0.0232037
DNAJC9 DnaJ (Hsp40) homolog, subfamily C, member 9 -0.023085
GLIS3 GLIS family zinc finger 3 -0.0230521
SPATA13 spermatogenesis associated 13 -0.0225395
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0224288
RPS10 ribosomal protein S10 -0.0221615
PCED1B PC-esterase domain containing 1B -0.0221525
SNX14 sorting nexin 14 -0.0220099
UBAP2 ubiquitin associated protein 2 -0.0219394
KRT86 keratin 86, type II -0.0219228
RPL36 ribosomal protein L36 -0.0216616
AEBP2 AE binding protein 2 -0.0215196
ZRANB3 zinc finger, RAN-binding domain containing 3 -0.0214786
MACROD2 MACRO domain containing 2 -0.0213824
MAML2 mastermind-like 2 (Drosophila) -0.0210329
PLCB4 phospholipase C, beta 4 -0.0208885
DSCAML1 Down syndrome cell adhesion molecule like 1 -0.0204995
RCOR1 REST corepressor 1 -0.0201387
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0198774
UGT2B7 UDP glucuronosyltransferase 2 family, polypeptide B7 -0.0197914
RPS27A ribosomal protein S27a -0.0197059
HELLS helicase, lymphoid-specific -0.0196165
SHISA5 shisa family member 5 -0.0195421
ATG7 autophagy related 7 -0.0194475
PCNX4 pecanex 4 -0.0194135
SH3TC2 SH3 domain and tetratricopeptide repeats 2 -0.0191558
CFAP44 cilia and flagella associated protein 44 -0.0190822
ASPH aspartate beta-hydroxylase -0.0190359
LARP1B La ribonucleoprotein domain family, member 1B -0.0189992
ERBIN erbb2 interacting protein -0.0188604
HMGA1 high mobility group AT-hook 1 -0.0188234
PHF3 PHD finger protein 3 -0.018773
TBCA tubulin folding cofactor A -0.0187372
WDR49 WD repeat domain 49 -0.0187335
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0186359
RPL13A ribosomal protein L13a -0.0183404
LAMA5 laminin, alpha 5 -0.0182745
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0182396
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.018234
TRIM25 tripartite motif containing 25 -0.0181758
EPC2 enhancer of polycomb homolog 2 (Drosophila) -0.0180368