Mitoxantrone (dihydrochloride)_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mitoxantrone (dihydrochloride) perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mitoxantrone (dihydrochloride)_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GMDS GDP-mannose 4,6-dehydratase 0.0944187
ARHGAP26 Rho GTPase activating protein 26 0.0877865
EXT1 exostosin glycosyltransferase 1 0.0767817
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0719605
EPSTI1 epithelial stromal interaction 1 (breast) 0.0636977
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0631095
STS steroid sulfatase (microsomal), isozyme S 0.062841
SPATA13 spermatogenesis associated 13 0.0608036
SMAD3 SMAD family member 3 0.0602119
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0582054
ERBIN erbb2 interacting protein 0.05509
VCL vinculin 0.0550588
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0546646
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0542262
VMP1 vacuole membrane protein 1 0.0528733
MAP7 microtubule-associated protein 7 0.0505151
TRIO trio Rho guanine nucleotide exchange factor 0.048529
PLSCR2 phospholipid scramblase 2 0.0481796
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0476799
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0465241
GCLC glutamate-cysteine ligase, catalytic subunit 0.0463676
ASPH aspartate beta-hydroxylase 0.0454174
NPSR1 neuropeptide S receptor 1 0.0454071
INTS6 integrator complex subunit 6 0.0435307
EPHB2 EPH receptor B2 0.0425401
IGF1R insulin-like growth factor 1 receptor 0.0415766
STAT1 signal transducer and activator of transcription 1, 91kDa 0.041573
LYZ lysozyme 0.041182
LPP LIM domain containing preferred translocation partner in lipoma 0.0408281
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0397122
LMO7 LIM domain 7 0.0395935
ITGA6 integrin, alpha 6 0.0378871
PHF3 PHD finger protein 3 0.0377765
DOCK1 dedicator of cytokinesis 1 0.0371605
APP amyloid beta (A4) precursor protein 0.0364157
MSI2 musashi RNA-binding protein 2 0.0360659
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0359865
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0358904
PRKCA protein kinase C, alpha 0.0357476
MX1 MX dynamin-like GTPase 1 0.0354963
SETX senataxin 0.0343762
DIAPH1 diaphanous-related formin 1 0.0340751
LAMA4 laminin, alpha 4 0.0338299
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0337999
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0337874
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0331615
SAMD12 sterile alpha motif domain containing 12 0.0330187
ANKRD10 ankyrin repeat domain 10 0.0327963
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) 0.0327399
RIGI RNA sensor RIG-I 0.0327007
TJP1 tight junction protein 1 0.0325782
AKAP13 A kinase (PRKA) anchor protein 13 0.0321911
FHIT fragile histidine triad 0.0319477
RAB10 RAB10, member RAS oncogene family 0.0318892
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0317794
RAD51B RAD51 paralog B 0.0311846
SDC4 syndecan 4 0.0308071
SHB Src homology 2 domain containing adaptor protein B 0.0299813
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0299417
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0296807
ATP11A ATPase, class VI, type 11A 0.0294108
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0290313
MCU mitochondrial calcium uniporter 0.028941
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0287478
FAF1 Fas (TNFRSF6) associated factor 1 0.0282458
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0282208
POF1B premature ovarian failure, 1B 0.0278428
FAT1 FAT atypical cadherin 1 0.0272327
TM4SF19 transmembrane 4 L six family member 19 0.0272263
DGKH diacylglycerol kinase, eta 0.027209
BAIAP2L1 BAI1-associated protein 2-like 1 0.0265203
RNF213 ring finger protein 213 0.0263085
MAML2 mastermind-like 2 (Drosophila) 0.026274
BCL2L1 BCL2-like 1 0.0261942
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.026103
SEPTIN9 septin 9 0.0259639
ZCCHC7 zinc finger, CCHC domain containing 7 0.0257857
PDLIM5 PDZ and LIM domain 5 0.0254361
ANXA2 annexin A2 0.0251227
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0246624
ZSWIM6 zinc finger, SWIM-type containing 6 0.0243806
TOX3 TOX high mobility group box family member 3 0.0241453
TCF12 transcription factor 12 0.0239901
HSPH1 heat shock 105kDa/110kDa protein 1 0.0239776
MCTP1 multiple C2 domains, transmembrane 1 0.0239228
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0238278
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0237991
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0233503
FOXO1 forkhead box O1 0.0232247
PRKCE protein kinase C, epsilon 0.022967
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 0.0227924
DIAPH2 diaphanous-related formin 2 0.022526
IFNGR1 interferon gamma receptor 1 0.0222359
TMEM65 transmembrane protein 65 0.021785
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.02177
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0212818
EXOC4 exocyst complex component 4 0.0212798
PDZD8 PDZ domain containing 8 0.0212322
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0211903
CDK13 cyclin-dependent kinase 13 0.0211381

decreased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin -0.168972
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.150052
TPT1 tumor protein, translationally-controlled 1 -0.134847
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.130071
HLA-B major histocompatibility complex, class I, B -0.101668
NDRG1 N-myc downstream regulated 1 -0.0964198
LCN2 lipocalin 2 -0.094259
MBNL2 muscleblind-like splicing regulator 2 -0.0782999
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0754224
TXNIP thioredoxin interacting protein -0.0618272
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0610034
H1-0 H1.0 linker histone -0.0571136
EIF1 eukaryotic translation initiation factor 1 -0.0556545
ZMYND8 zinc finger, MYND-type containing 8 -0.0542238
RPL35A ribosomal protein L35a -0.0510812
RPS6 ribosomal protein S6 -0.0483651
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0475328
RPLP1 ribosomal protein, large, P1 -0.0467864
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0461213
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0454334
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0451717
TMSB10 thymosin beta 10 -0.0446262
UBC ubiquitin C -0.0440859
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0434141
IRF1 interferon regulatory factor 1 -0.0424997
PDIA3 protein disulfide isomerase family A, member 3 -0.0417921
RHOBTB3 Rho-related BTB domain containing 3 -0.0406284
WSB1 WD repeat and SOCS box containing 1 -0.0403818
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0399822
GNAS GNAS complex locus -0.0395984
PTMA prothymosin, alpha -0.0390663
HLA-A major histocompatibility complex, class I, A -0.0387697
MT2A metallothionein 2A -0.0374866
LDHA lactate dehydrogenase A -0.0363493
CALR calreticulin -0.0362526
RNF149 ring finger protein 149 -0.0350205
HLA-C major histocompatibility complex, class I, C -0.0344808
RPL12 ribosomal protein L12 -0.0343592
EGR1 early growth response 1 -0.0343366
RPS19 ribosomal protein S19 -0.0336426
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0328638
KRT19 keratin 19, type I -0.0324046
RPL34 ribosomal protein L34 -0.0323876
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0321123
RBM39 RNA binding motif protein 39 -0.0320308
NCKAP5 NCK-associated protein 5 -0.0319556
H3-3B H3.3 histone B -0.031791
CSTB cystatin B (stefin B) -0.0317813
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0316449
DIAPH3 diaphanous-related formin 3 -0.0313765
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0308758
AGR2 anterior gradient 2 -0.0306296
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0293957
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0292794
MORF4L2 mortality factor 4 like 2 -0.0288722
IFI27 interferon, alpha-inducible protein 27 -0.0288384
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0286549
PERP PERP, TP53 apoptosis effector -0.0283222
AHI1 Abelson helper integration site 1 -0.028282
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.0278829
MKI67 marker of proliferation Ki-67 -0.0271938
UGDH UDP-glucose 6-dehydrogenase -0.0271303
LMAN1 lectin, mannose-binding, 1 -0.0270727
LOC112694756 uncharaterized LOC112694756 -0.0269359
TPI1 triosephosphate isomerase 1 -0.0268901
TMPRSS4 transmembrane protease, serine 4 -0.0268649
RPL23 ribosomal protein L23 -0.0266737
FTL ferritin, light polypeptide -0.0266437
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) -0.0262729
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0261619
MXD1 MAX dimerization protein 1 -0.0257884
RPL26 ribosomal protein L26 -0.0255146
DHRS3 dehydrogenase/reductase (SDR family) member 3 -0.0254423
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0253726
RAB1A RAB1A, member RAS oncogene family -0.025356
ENO1 enolase 1, (alpha) -0.0251394
SMIM14 small integral membrane protein 14 -0.0249703
MT1X metallothionein 1X -0.0247407
IFI6 interferon, alpha-inducible protein 6 -0.0243258
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0241982
S100A10 S100 calcium binding protein A10 -0.0240932
ZNF395 zinc finger protein 395 -0.0239798
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0239533
RPL19 ribosomal protein L19 -0.0238689
UBE2B ubiquitin-conjugating enzyme E2B -0.0236108
PRRC2C proline-rich coiled-coil 2C -0.0234688
RRBP1 ribosome binding protein 1 -0.0232569
ACBD3 acyl-CoA binding domain containing 3 -0.0231201
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0231139
RPL11 ribosomal protein L11 -0.0230852
SPDYA speedy/RINGO cell cycle regulator family member A -0.0229557
RPL9 ribosomal protein L9 -0.0229236
SPG11 spastic paraplegia 11 (autosomal recessive) -0.0227961
GOLPH3L golgi phosphoprotein 3-like -0.0227206
CXXC5 CXXC finger protein 5 -0.0225
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0224661
ANXA1 annexin A1 -0.0222953
HLA-E major histocompatibility complex, class I, E -0.0222452
HDLBP high density lipoprotein binding protein -0.0221935
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0216868