Mitoxantrone (dihydrochloride)_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mitoxantrone (dihydrochloride) perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mitoxantrone (dihydrochloride)_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 0.20224
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0998914
CD44 CD44 molecule (Indian blood group) 0.0962521
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0836261
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0777244
MYH9 myosin, heavy chain 9, non-muscle 0.0763086
HMGA2 high mobility group AT-hook 2 0.0739813
FN1 fibronectin 1 0.0735607
VIM vimentin 0.0718131
HIPK2 homeodomain interacting protein kinase 2 0.0710832
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0706378
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0636153
FNDC3B fibronectin type III domain containing 3B 0.0623028
NKAIN3 Na+/K+ transporting ATPase interacting 3 0.0620817
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0619176
SDC2 syndecan 2 0.0575942
EXT1 exostosin glycosyltransferase 1 0.0564622
ATP13A3 ATPase type 13A3 0.0531481
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0528162
ERRFI1 ERBB receptor feedback inhibitor 1 0.0518367
WWTR1 WW domain containing transcription regulator 1 0.0517759
GLIS3 GLIS family zinc finger 3 0.0513901
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0508084
RASA2 RAS p21 protein activator 2 0.0498926
MBNL1 muscleblind-like splicing regulator 1 0.0492953
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.048759
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0480837
ALCAM activated leukocyte cell adhesion molecule 0.0465961
ZBTB38 zinc finger and BTB domain containing 38 0.0451154
PTK2 protein tyrosine kinase 2 0.0449997
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0421465
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0421294
LTBP1 latent transforming growth factor beta binding protein 1 0.0417133
NAV2 neuron navigator 2 0.0406126
VEGFC vascular endothelial growth factor C 0.0396343
EEF2 eukaryotic translation elongation factor 2 0.0388356
PDLIM5 PDZ and LIM domain 5 0.0384558
VMP1 vacuole membrane protein 1 0.0367835
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.036724
TNIP1 TNFAIP3 interacting protein 1 0.0364179
CXCL8 chemokine (C-X-C motif) ligand 8 0.0354337
TFG TRK-fused gene 0.0353102
FTH1 ferritin, heavy polypeptide 1 0.0348971
CNTN5 contactin 5 0.034527
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0344639
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0341442
FAT1 FAT atypical cadherin 1 0.0339304
ANKRD28 ankyrin repeat domain 28 0.0333917
MYO10 myosin X 0.0333833
SPAG9 sperm associated antigen 9 0.0330029
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0324644
MAML2 mastermind-like 2 (Drosophila) 0.0316818
MRTFA myocardin related transcription factor A 0.0316746
MT2A metallothionein 2A 0.0312645
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0312211
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0310542
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0310338
SOD2 superoxide dismutase 2, mitochondrial 0.0309367
MACF1 microtubule-actin crosslinking factor 1 0.0305814
COL4A1 collagen, type IV, alpha 1 0.0302818
LPP LIM domain containing preferred translocation partner in lipoma 0.0301525
JAK2 Janus kinase 2 0.0296154
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0291269
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0289275
IL6ST interleukin 6 signal transducer 0.0289062
JAK1 Janus kinase 1 0.0288318
SVIL supervillin 0.0281161
VCL vinculin 0.0276921
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0273941
JAG1 jagged 1 0.02727
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0270618
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0270351
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0266396
GRB10 growth factor receptor-bound protein 10 0.0265384
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0263621
HAS2 hyaluronan synthase 2 0.0262271
VCAN versican 0.0261839
MED13L mediator complex subunit 13-like 0.0257695
EPS8 epidermal growth factor receptor pathway substrate 8 0.0256076
SQLE squalene epoxidase 0.0254926
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0252926
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.025228
ARRDC3 arrestin domain containing 3 0.0249321
SMAD3 SMAD family member 3 0.0248111
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.024622
RICTOR RPTOR independent companion of MTOR, complex 2 0.0244852
SP100 SP100 nuclear antigen 0.0243897
JMJD1C jumonji domain containing 1C 0.0242881
OSBPL9 oxysterol binding protein-like 9 0.0241929
ITGAV integrin, alpha V 0.0241721
VEGFA vascular endothelial growth factor A 0.0240909
ASPH aspartate beta-hydroxylase 0.0240809
PCM1 pericentriolar material 1 0.0240343
TPM3 tropomyosin 3 0.0236723
MYO1B myosin IB 0.0235828
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0234133
KMT2E lysine (K)-specific methyltransferase 2E 0.0233568
CALU calumenin 0.0233457
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0233149
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0233069

decreased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 -0.303166
TIMP3 TIMP metallopeptidase inhibitor 3 -0.175483
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.154049
COL1A1 collagen, type I, alpha 1 -0.12905
COL5A1 collagen, type V, alpha 1 -0.109039
IGFBP3 insulin-like growth factor binding protein 3 -0.0970864
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0937346
PSD3 pleckstrin and Sec7 domain containing 3 -0.0824845
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.077137
TMSB10 thymosin beta 10 -0.0706404
COL1A2 collagen, type I, alpha 2 -0.0644884
AHNAK AHNAK nucleoprotein -0.0589198
ABI3BP ABI family, member 3 (NESH) binding protein -0.0576503
FBN1 fibrillin 1 -0.0556743
CDH13 cadherin 13 -0.0544508
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0498365
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0467768
EGFR epidermal growth factor receptor -0.0446217
COL7A1 collagen, type VII, alpha 1 -0.044311
COL6A2 collagen, type VI, alpha 2 -0.0426481
CMIP c-Maf inducing protein -0.0395324
CADM1 cell adhesion molecule 1 -0.0386249
TGFBI transforming growth factor, beta-induced, 68kDa -0.0378371
OXR1 oxidation resistance 1 -0.0369074
PRELID2 PRELI domain containing 2 -0.0362371
KDM4B lysine (K)-specific demethylase 4B -0.0344542
F3 coagulation factor III (thromboplastin, tissue factor) -0.0343486
IARS1 isoleucyl-tRNA synthetase 1 -0.0341664
COL6A1 collagen, type VI, alpha 1 -0.0329448
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.032798
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0324455
ZBTB20 zinc finger and BTB domain containing 20 -0.0311232
TPT1 tumor protein, translationally-controlled 1 -0.0309223
AFF3 AF4/FMR2 family, member 3 -0.0308922
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0305015
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0300935
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.029923
SMYD3 SET and MYND domain containing 3 -0.0297884
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0292816
BNC2 basonuclin 2 -0.0290827
DPYSL2 dihydropyrimidinase-like 2 -0.0284315
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0282076
RUNX1 runt-related transcription factor 1 -0.0281645
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0274326
FKBP10 FK506 binding protein 10, 65 kDa -0.0272783
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0271425
ARHGAP35 Rho GTPase activating protein 35 -0.0268973
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0262062
LOXL2 lysyl oxidase-like 2 -0.0261401
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) -0.0259505
FRMD4A FERM domain containing 4A -0.0258694
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0257877
PTPRF protein tyrosine phosphatase, receptor type, F -0.024875
FGFR1 fibroblast growth factor receptor 1 -0.0247979
TBC1D22A TBC1 domain family, member 22A -0.0247341
BBX bobby sox homolog (Drosophila) -0.0243504
KCTD16 potassium channel tetramerization domain containing 16 -0.0238273
VEPH1 ventricular zone expressed PH domain-containing 1 -0.0237511
GANAB glucosidase, alpha; neutral AB -0.0236001
CA12 carbonic anhydrase XII -0.0235993
HSPG2 heparan sulfate proteoglycan 2 -0.0235808
MRPS6 mitochondrial ribosomal protein S6 -0.0234793
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0234515
LIMS1 LIM and senescent cell antigen-like domains 1 -0.023317
EPHB1 EPH receptor B1 -0.0228609
HM13 histocompatibility (minor) 13 -0.0228208
ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 -0.02263
IER3 immediate early response 3 -0.0224421
WSB1 WD repeat and SOCS box containing 1 -0.0215331
CAMTA1 calmodulin binding transcription activator 1 -0.0214955
HLA-B major histocompatibility complex, class I, B -0.0214714
ACTG1 actin gamma 1 -0.0211696
IFI6 interferon, alpha-inducible protein 6 -0.0208421
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0207917
NCKAP5 NCK-associated protein 5 -0.0207361
CLMP CXADR-like membrane protein -0.020736
TM4SF1 transmembrane 4 L six family member 1 -0.0206427
EHD2 EH-domain containing 2 -0.0205809
ITGA11 integrin, alpha 11 -0.0203578
RPL23 ribosomal protein L23 -0.0197404
RRBP1 ribosome binding protein 1 -0.0197243
IFI16 interferon, gamma-inducible protein 16 -0.019684
LMAN1 lectin, mannose-binding, 1 -0.019545
RTN3 reticulon 3 -0.0194735
ZMAT4 zinc finger, matrin-type 4 -0.0193978
RNF220 ring finger protein 220 -0.0191117
PDE10A phosphodiesterase 10A -0.0189625
GJA1 gap junction protein, alpha 1, 43kDa -0.0189617
S100A6 S100 calcium binding protein A6 -0.0188874
ZMYND8 zinc finger, MYND-type containing 8 -0.0188659
RPL35A ribosomal protein L35a -0.0185804
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 -0.0185616
PRSS23 protease, serine, 23 -0.0184902
INHBA inhibin, beta A -0.0182641
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 -0.0182613
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0181812
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0178962
DGKG diacylglycerol kinase, gamma 90kDa -0.0177125
ANKRD12 ankyrin repeat domain 12 -0.0174532
ARL4C ADP-ribosylation factor-like 4C -0.0172809