Mitoxantrone (dihydrochloride)_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mitoxantrone (dihydrochloride) perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mitoxantrone (dihydrochloride)_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TP63 tumor protein p63 0.154668
VIM vimentin 0.149251
DST dystonin 0.119826
CD44 CD44 molecule (Indian blood group) 0.095417
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.089482
DPYD dihydropyrimidine dehydrogenase 0.0771106
PRELID2 PRELI domain containing 2 0.0650593
ZDHHC14 zinc finger, DHHC-type containing 14 0.0636856
BIRC3 baculoviral IAP repeat containing 3 0.0597696
DLG1 discs, large homolog 1 (Drosophila) 0.0597491
PARP14 poly (ADP-ribose) polymerase family, member 14 0.059328
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0585603
CADM2 cell adhesion molecule 2 0.0570494
CFAP299 cilia and flagella associated protein 299 0.0550356
RAD51B RAD51 paralog B 0.0541526
EPHA4 EPH receptor A4 0.0512024
PSD3 pleckstrin and Sec7 domain containing 3 0.0468152
HDAC9 histone deacetylase 9 0.04628
ZBTB38 zinc finger and BTB domain containing 38 0.0447031
WARS1 tryptophanyl-tRNA synthetase 1 0.0428204
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0424802
SDC4 syndecan 4 0.0410231
FTL ferritin, light polypeptide 0.0404969
VEGFC vascular endothelial growth factor C 0.0400823
NPAS2 neuronal PAS domain protein 2 0.0395398
RIGI RNA sensor RIG-I 0.0390572
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.038895
FER fer (fps/fes related) tyrosine kinase 0.0366937
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0364628
FMNL2 formin-like 2 0.0361552
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.034591
MBNL2 muscleblind-like splicing regulator 2 0.0339928
RUNX1 runt-related transcription factor 1 0.0336855
RNF213 ring finger protein 213 0.0333968
EHBP1 EH domain binding protein 1 0.0331567
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.032561
SP100 SP100 nuclear antigen 0.032513
ZNF638 zinc finger protein 638 0.0324686
CSMD3 CUB and Sushi multiple domains 3 0.0317622
ESYT2 extended synaptotagmin-like protein 2 0.0317043
CHD9 chromodomain helicase DNA binding protein 9 0.0315127
SPIDR scaffolding protein involved in DNA repair 0.0309874
MYOF myoferlin 0.0308359
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0302379
DOCK1 dedicator of cytokinesis 1 0.0300067
TAS2R14 taste receptor, type 2, member 14 0.0299954
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0299364
EGFR epidermal growth factor receptor 0.0293956
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0291269
VCL vinculin 0.0288171
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0286671
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0284034
TTC3 tetratricopeptide repeat domain 3 0.0283839
JUN jun proto-oncogene 0.0282177
NAV2 neuron navigator 2 0.0278441
PDE8A phosphodiesterase 8A 0.0273136
PARD3 par-3 family cell polarity regulator 0.026951
ENO1 enolase 1, (alpha) 0.0266115
RB1 retinoblastoma 1 0.0265671
TSC22D1 TSC22 domain family, member 1 0.0265018
ADGRG6 adhesion G protein-coupled receptor G6 0.0261755
LPP LIM domain containing preferred translocation partner in lipoma 0.0260582
SMYD3 SET and MYND domain containing 3 0.0259862
IGF1R insulin-like growth factor 1 receptor 0.0259778
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0258325
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.025381
AKAP9 A kinase (PRKA) anchor protein 9 0.0252869
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0250564
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.024986
ZBTB20 zinc finger and BTB domain containing 20 0.0249286
HDAC8 histone deacetylase 8 0.0248869
ATM ATM serine/threonine kinase 0.0247661
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0247258
OSBPL8 oxysterol binding protein-like 8 0.0246682
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0246523
B2M beta-2-microglobulin 0.0242932
EXOC4 exocyst complex component 4 0.0242927
BPTF bromodomain PHD finger transcription factor 0.0242412
H1-0 H1.0 linker histone 0.0242351
INTS6 integrator complex subunit 6 0.0237473
PLIN2 perilipin 2 0.0236071
FAF1 Fas (TNFRSF6) associated factor 1 0.0234121
TNS3 tensin 3 0.0229764
PDGFC platelet derived growth factor C 0.0229226
TTC28 tetratricopeptide repeat domain 28 0.0228929
PLK2 polo-like kinase 2 0.0228444
PDE10A phosphodiesterase 10A 0.0226248
PARP9 poly (ADP-ribose) polymerase family, member 9 0.0224683
PRKCE protein kinase C, epsilon 0.0222617
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0222253
CUX1 cut-like homeobox 1 0.0217588
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0216371
FTO fat mass and obesity associated 0.0214442
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0213123
CEP128 centrosomal protein 128kDa 0.0212833
BABAM2 BRISC and BRCA1 A complex member 2 0.0212724
AKAP12 A kinase (PRKA) anchor protein 12 0.021066
FBXL17 F-box and leucine-rich repeat protein 17 0.0210087
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0210057
ANXA2 annexin A2 0.0208455

decreased expression

Symbol Name Standardized Value
TM4SF1 transmembrane 4 L six family member 1 -0.168484
TXNRD1 thioredoxin reductase 1 -0.117346
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.112407
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.111125
TPT1 tumor protein, translationally-controlled 1 -0.0982998
MT2A metallothionein 2A -0.0935486
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0864691
POTEF POTE ankyrin domain family, member F -0.0773676
RPL26 ribosomal protein L26 -0.075096
MT1X metallothionein 1X -0.074233
RPS2 ribosomal protein S2 -0.0731891
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0725245
KTN1 kinectin 1 (kinesin receptor) -0.062698
RAI1 retinoic acid induced 1 -0.0607555
CENPF centromere protein F, 350/400kDa -0.054508
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0536213
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0520323
RPS12 ribosomal protein S12 -0.0519439
CLTC clathrin, heavy chain (Hc) -0.051606
TMEM41B transmembrane protein 41B -0.0511079
USP34 ubiquitin specific peptidase 34 -0.0510726
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0503541
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0486561
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0475011
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0474437
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.047422
ADAM17 ADAM metallopeptidase domain 17 -0.0470828
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0460471
PRRC2C proline-rich coiled-coil 2C -0.0455794
FLNB filamin B, beta -0.044902
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0441728
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0433248
RPS6 ribosomal protein S6 -0.0432092
RTN4 reticulon 4 -0.0429835
HSPA8 heat shock 70kDa protein 8 -0.0429264
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0428767
SPRY4 sprouty homolog 4 (Drosophila) -0.0423284
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.042009
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0407793
NUP58 nucleoporin 58 -0.0391435
NAMPT nicotinamide phosphoribosyltransferase -0.0390877
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0389605
ZFAND3 zinc finger, AN1-type domain 3 -0.0385918
SET SET nuclear proto-oncogene -0.0378033
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0368541
LOC112694756 uncharaterized LOC112694756 -0.0367717
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.036761
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0364578
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0358143
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0356675
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0354782
GARS1 glycyl-tRNA synthetase 1 -0.0351107
ZEB1 zinc finger E-box binding homeobox 1 -0.0346446
RPLP0 ribosomal protein, large, P0 -0.0343213
KMT2E lysine (K)-specific methyltransferase 2E -0.03428
CSDE1 cold shock domain containing E1, RNA-binding -0.0340803
RPL12 ribosomal protein L12 -0.0337287
RBM39 RNA binding motif protein 39 -0.0325451
CNBP CCHC-type zinc finger, nucleic acid binding protein -0.0324002
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0323909
LDHA lactate dehydrogenase A -0.0322249
S100A6 S100 calcium binding protein A6 -0.032222
RPL36A ribosomal protein L36a -0.031553
TRIP12 thyroid hormone receptor interactor 12 -0.0311962
XPO1 exportin 1 -0.0310553
RPL37 ribosomal protein L37 -0.030938
BZW1 basic leucine zipper and W2 domains 1 -0.0304499
PTMA prothymosin, alpha -0.0304291
MKI67 marker of proliferation Ki-67 -0.0299234
RPS3 ribosomal protein S3 -0.0297194
HPCAL1 hippocalcin-like 1 -0.0296593
TRA2B transformer 2 beta homolog (Drosophila) -0.029469
SERINC1 serine incorporator 1 -0.0293443
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0292522
MIB1 mindbomb E3 ubiquitin protein ligase 1 -0.0292336
GSK3B glycogen synthase kinase 3 beta -0.0290806
RASAL2 RAS protein activator like 2 -0.0290259
NAP1L1 nucleosome assembly protein 1-like 1 -0.028457
UBC ubiquitin C -0.0284025
CKAP5 cytoskeleton associated protein 5 -0.0281709
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.028086
ATP13A3 ATPase type 13A3 -0.0278375
RPS23 ribosomal protein S23 -0.0278183
BMERB1 bMERB domain containing 1 -0.0277417
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0276989
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0276979
NIPBL Nipped-B homolog (Drosophila) -0.0276478
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0274886
FBXO11 F-box protein 11 -0.0274327
RSRC2 arginine/serine-rich coiled-coil 2 -0.0273989
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0272405
PUM2 pumilio RNA-binding family member 2 -0.0272174
MATR3 matrin 3 -0.0271416
CDCP1 CUB domain containing protein 1 -0.0268704
MIS18BP1 MIS18 binding protein 1 -0.0268089
CCDC47 coiled-coil domain containing 47 -0.0267945
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0267894
ZFR zinc finger RNA binding protein -0.0266708
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 -0.0266085
WDR43 WD repeat domain 43 -0.0264569