Mitoxantrone (dihydrochloride)_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mitoxantrone (dihydrochloride) perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mitoxantrone (dihydrochloride)_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 0.26999
PDE4D phosphodiesterase 4D, cAMP-specific 0.265441
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.105383
WWOX WW domain containing oxidoreductase 0.0833233
TXNRD1 thioredoxin reductase 1 0.0790747
GRAMD1B GRAM domain containing 1B 0.0684827
ASPH aspartate beta-hydroxylase 0.0630619
KYNU kynureninase 0.0624023
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.056187
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0561139
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0560883
PDE10A phosphodiesterase 10A 0.0504446
PDLIM5 PDZ and LIM domain 5 0.0489368
BIRC3 baculoviral IAP repeat containing 3 0.0477323
ERRFI1 ERBB receptor feedback inhibitor 1 0.0437772
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0419397
GLIS3 GLIS family zinc finger 3 0.0405495
FAM107B family with sequence similarity 107, member B 0.0395179
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0392216
FHIT fragile histidine triad 0.0390425
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0384154
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0372221
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0367184
VMP1 vacuole membrane protein 1 0.0365624
RAD51B RAD51 paralog B 0.0362406
MYOF myoferlin 0.0344862
GLS2 glutaminase 2 (liver, mitochondrial) 0.0322075
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0314774
FNDC3B fibronectin type III domain containing 3B 0.0309289
SPIDR scaffolding protein involved in DNA repair 0.0307488
SPAG9 sperm associated antigen 9 0.0302084
BMP6 bone morphogenetic protein 6 0.0301859
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0301107
RTN4 reticulon 4 0.0297952
SMAD2 SMAD family member 2 0.0296392
ELL2 elongation factor, RNA polymerase II, 2 0.0294428
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0293802
HSPA8 heat shock 70kDa protein 8 0.0286478
DSCAM Down syndrome cell adhesion molecule 0.0285545
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0282658
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.028217
ATF6 activating transcription factor 6 0.0277332
AHR aryl hydrocarbon receptor 0.0275129
TFPI2 tissue factor pathway inhibitor 2 0.0274663
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.026656
SLC38A2 solute carrier family 38, member 2 0.0264009
DST dystonin 0.0262834
TPM3 tropomyosin 3 0.0261356
FTH1 ferritin, heavy polypeptide 1 0.0261146
UTRN utrophin 0.026049
EFNA5 ephrin-A5 0.025942
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0254399
TBC1D5 TBC1 domain family, member 5 0.0253562
WDR43 WD repeat domain 43 0.0250375
ZSWIM6 zinc finger, SWIM-type containing 6 0.0248741
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0247965
LPP LIM domain containing preferred translocation partner in lipoma 0.0244191
ATXN1 ataxin 1 0.0241278
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0239763
CLTC clathrin, heavy chain (Hc) 0.0239465
EXOC6B exocyst complex component 6B 0.0235494
CENPF centromere protein F, 350/400kDa 0.0234686
PRKD1 protein kinase D1 0.0230148
PARD3B par-3 family cell polarity regulator beta 0.0227989
TTC28 tetratricopeptide repeat domain 28 0.022751
IGF1R insulin-like growth factor 1 receptor 0.022677
ARID1B AT rich interactive domain 1B (SWI1-like) 0.022423
YAP1 Yes-associated protein 1 0.0223877
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0223742
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0221808
EXOC4 exocyst complex component 4 0.0218676
GPHN gephyrin 0.0214307
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0214111
MYH9 myosin, heavy chain 9, non-muscle 0.0214072
DOCK5 dedicator of cytokinesis 5 0.0213315
NAMPT nicotinamide phosphoribosyltransferase 0.0213207
LGALS12 lectin, galactoside-binding, soluble, 12 0.0211715
INTS6 integrator complex subunit 6 0.0209997
MACF1 microtubule-actin crosslinking factor 1 0.0209359
NRG1 neuregulin 1 0.0208133
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0206632
PTPRM protein tyrosine phosphatase, receptor type, M 0.0206441
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0205742
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0205618
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0204866
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0204762
OLA1 Obg-like ATPase 1 0.0200825
GMDS GDP-mannose 4,6-dehydratase 0.0199777
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0198122
PRKN parkin RBR E3 ubiquitin protein ligase 0.0198103
FAF1 Fas (TNFRSF6) associated factor 1 0.0196261
TRA2A transformer 2 alpha homolog (Drosophila) 0.0193994
NIPBL Nipped-B homolog (Drosophila) 0.019311
SOD2 superoxide dismutase 2, mitochondrial 0.0192894
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0190967
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like 0.0190515
WDPCP WD repeat containing planar cell polarity effector 0.0186957
ARHGAP26 Rho GTPase activating protein 26 0.0186155
PRELID2 PRELI domain containing 2 0.018552
CXCL8 chemokine (C-X-C motif) ligand 8 0.0184757

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.166924
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.16673
TMSB10 thymosin beta 10 -0.133479
VIM vimentin -0.104878
MT2A metallothionein 2A -0.104827
IGFBP3 insulin-like growth factor binding protein 3 -0.0881325
RPL23 ribosomal protein L23 -0.060497
PYGL phosphorylase, glycogen, liver -0.058655
ACTG1 actin gamma 1 -0.0573254
POTEF POTE ankyrin domain family, member F -0.0573185
FLNB filamin B, beta -0.0572766
IGF2 insulin-like growth factor 2 -0.0567664
S100A6 S100 calcium binding protein A6 -0.0542819
HLA-B major histocompatibility complex, class I, B -0.0503075
RPLP1 ribosomal protein, large, P1 -0.0499733
RPS21 ribosomal protein S21 -0.0470458
RPS8 ribosomal protein S8 -0.0436674
NDRG1 N-myc downstream regulated 1 -0.0429505
PTMA prothymosin, alpha -0.0422327
TPT1 tumor protein, translationally-controlled 1 -0.0419604
RPL19 ribosomal protein L19 -0.0403671
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0397691
IGFBP4 insulin-like growth factor binding protein 4 -0.0380586
EIF1 eukaryotic translation initiation factor 1 -0.0354514
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0351294
TPI1 triosephosphate isomerase 1 -0.0345949
EGFR epidermal growth factor receptor -0.0344902
RPL37A ribosomal protein L37a -0.0343769
CAVIN1 caveolae associated protein 1 -0.0334079
RPS12 ribosomal protein S12 -0.0322321
RPS29 ribosomal protein S29 -0.0319468
STC1 stanniocalcin 1 -0.0318852
HLA-A major histocompatibility complex, class I, A -0.0314812
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0303384
RPS6 ribosomal protein S6 -0.0296249
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0294547
RPL31 ribosomal protein L31 -0.0286508
RPL35A ribosomal protein L35a -0.0282745
CMIP c-Maf inducing protein -0.0277319
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0271497
RPS19 ribosomal protein S19 -0.0268479
PKM pyruvate kinase, muscle -0.0259406
RPL37 ribosomal protein L37 -0.0257755
S100A11 S100 calcium binding protein A11 -0.0252816
ZFHX3 zinc finger homeobox 3 -0.0252281
CTBP2 C-terminal binding protein 2 -0.0250212
RPL36 ribosomal protein L36 -0.0249983
RPL36A ribosomal protein L36a -0.0249394
GNAS GNAS complex locus -0.0249159
PRR16 proline rich 16 -0.0247908
RPL36AL ribosomal protein L36a-like -0.0246782
RPL34 ribosomal protein L34 -0.0244763
RPS27A ribosomal protein S27a -0.0237535
S100A10 S100 calcium binding protein A10 -0.0235537
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0232285
ANKRD11 ankyrin repeat domain 11 -0.0231567
LGALS1 lectin, galactoside-binding, soluble, 1 -0.022899
TPM4 tropomyosin 4 -0.022572
S100A9 S100 calcium binding protein A9 -0.0225689
RPL9 ribosomal protein L9 -0.0223799
NAP1L1 nucleosome assembly protein 1-like 1 -0.022253
RPS24 ribosomal protein S24 -0.0220071
KIFC3 kinesin family member C3 -0.02181
COX4I1 cytochrome c oxidase subunit IV isoform 1 -0.0217118
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0215953
RPS13 ribosomal protein S13 -0.0215582
SOX4 SRY (sex determining region Y)-box 4 -0.0213075
KDM3A lysine (K)-specific demethylase 3A -0.0213014
ACTN1 actinin, alpha 1 -0.0211875
RPS27 ribosomal protein S27 -0.0211245
RPS3 ribosomal protein S3 -0.0211012
RPS17 ribosomal protein S17 -0.0210496
SAMD4A sterile alpha motif domain containing 4A -0.0208106
AHNAK AHNAK nucleoprotein -0.0205094
ASTN2 astrotactin 2 -0.0204154
TERF2IP telomeric repeat binding factor 2, interacting protein -0.020317
BASP1 brain abundant, membrane attached signal protein 1 -0.0199975
SERF2 small EDRK-rich factor 2 -0.0199166
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0198002
ZMYND8 zinc finger, MYND-type containing 8 -0.0197804
RPS23 ribosomal protein S23 -0.0196786
COTL1 coactosin-like F-actin binding protein 1 -0.0196501
RPL28 ribosomal protein L28 -0.0195031
HLA-E major histocompatibility complex, class I, E -0.0194071
RPL26 ribosomal protein L26 -0.0193643
FKBP10 FK506 binding protein 10, 65 kDa -0.0193133
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0190335
RPS25 ribosomal protein S25 -0.0190061
RAP1GAP2 RAP1 GTPase activating protein 2 -0.018698
THBS1 thrombospondin 1 -0.0186627
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0186189
RPS14 ribosomal protein S14 -0.0185566
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha -0.0181681
HMGA1 high mobility group AT-hook 1 -0.0181469
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0179266
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.017717
C15ORF48 chromosome 15 open reading frame 48 -0.0176247
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0174713
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0174058
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0173737