Mitoxantrone (dihydrochloride)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mitoxantrone (dihydrochloride) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mitoxantrone (dihydrochloride)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.14192
PDE4D phosphodiesterase 4D, cAMP-specific 0.124825
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.106358
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0988656
ELL2 elongation factor, RNA polymerase II, 2 0.0934592
ERRFI1 ERBB receptor feedback inhibitor 1 0.0878235
GRAMD1B GRAM domain containing 1B 0.0865368
ZSWIM6 zinc finger, SWIM-type containing 6 0.0828648
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0828237
TXNRD1 thioredoxin reductase 1 0.0812816
MCL1 myeloid cell leukemia 1 0.0741601
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0720527
VCL vinculin 0.0702648
DOCK5 dedicator of cytokinesis 5 0.0692468
INTS6 integrator complex subunit 6 0.0670106
YBX3 Y box binding protein 3 0.0644793
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0640189
THSD4 thrombospondin, type I, domain containing 4 0.063948
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.062588
IGF1R insulin-like growth factor 1 receptor 0.0599146
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0556759
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0542708
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0529933
HOMER1 homer scaffolding protein 1 0.0524567
PDLIM5 PDZ and LIM domain 5 0.0520762
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0510118
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0497698
RBM39 RNA binding motif protein 39 0.0492938
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0487752
SLC38A2 solute carrier family 38, member 2 0.0480093
YAP1 Yes-associated protein 1 0.0474819
WNT2B wingless-type MMTV integration site family, member 2B 0.0430733
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0428828
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0421033
SMYD3 SET and MYND domain containing 3 0.0410156
TRA2A transformer 2 alpha homolog (Drosophila) 0.040539
SFPQ splicing factor proline/glutamine-rich 0.0405143
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0395213
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0387539
WNK1 WNK lysine deficient protein kinase 1 0.0386837
SPRED2 sprouty-related, EVH1 domain containing 2 0.0383969
RAD51B RAD51 paralog B 0.0377329
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0376109
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0371126
NABP1 nucleic acid binding protein 1 0.0364254
VMP1 vacuole membrane protein 1 0.0363651
JMJD1C jumonji domain containing 1C 0.0360807
DSCAM Down syndrome cell adhesion molecule 0.0353854
TRIM59 tripartite motif containing 59 0.0353484
RRM2 ribonucleotide reductase M2 0.0348483
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0335039
BRD2 bromodomain containing 2 0.0332932
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0332121
TRIP12 thyroid hormone receptor interactor 12 0.0327949
BICD1 bicaudal D homolog 1 (Drosophila) 0.0322758
ZFAND3 zinc finger, AN1-type domain 3 0.031794
PUM2 pumilio RNA-binding family member 2 0.031496
RAB7A RAB7A, member RAS oncogene family 0.0306009
EXOC6B exocyst complex component 6B 0.0303498
PHF3 PHD finger protein 3 0.0300733
KLF7 Kruppel-like factor 7 (ubiquitous) 0.03004
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0300221
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0297057
TFPI2 tissue factor pathway inhibitor 2 0.0297024
SNAP25 synaptosomal-associated protein, 25kDa 0.0292881
ANKRD17 ankyrin repeat domain 17 0.0292604
MARCHF4 membrane associated ring-CH-type finger 4 0.0292123
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0287727
CDK17 cyclin-dependent kinase 17 0.0286721
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0277578
GSK3B glycogen synthase kinase 3 beta 0.0273092
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.027278
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0271103
FBXO11 F-box protein 11 0.0268996
USP34 ubiquitin specific peptidase 34 0.0268938
NFE2L2 nuclear factor, erythroid 2-like 2 0.0266906
HSPA8 heat shock 70kDa protein 8 0.0264014
EIF3A eukaryotic translation initiation factor 3, subunit A 0.025776
GMDS GDP-mannose 4,6-dehydratase 0.0256984
USP9X ubiquitin specific peptidase 9, X-linked 0.0255499
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0254016
MAPK8 mitogen-activated protein kinase 8 0.0253771
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0253728
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.025027
ANKRD36 ankyrin repeat domain 36 0.0249871
R3HDM2 R3H domain containing 2 0.0248445
GPHN gephyrin 0.0248311
NIPBL Nipped-B homolog (Drosophila) 0.0247602
THADA thyroid adenoma associated 0.0247093
ZEB1 zinc finger E-box binding homeobox 1 0.0245
LRRC23 leucine rich repeat containing 23 0.0243353
AGO3 argonaute RISC catalytic component 3 0.0243163
BBS9 Bardet-Biedl syndrome 9 0.0241274
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0240159
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 0.0238935
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0236287
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0236103
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0232387
AKAP13 A kinase (PRKA) anchor protein 13 0.0231757
CMIP c-Maf inducing protein 0.0231476

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.185033
TMSB10 thymosin beta 10 -0.127663
TPI1 triosephosphate isomerase 1 -0.108893
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0749799
POTEF POTE ankyrin domain family, member F -0.0634136
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0585654
PFN1 profilin 1 -0.0542932
KTN1 kinectin 1 (kinesin receptor) -0.0518284
VIM vimentin -0.0509103
HLA-B major histocompatibility complex, class I, B -0.049924
EGR1 early growth response 1 -0.0445295
OSMR oncostatin M receptor -0.0436667
PDIA3 protein disulfide isomerase family A, member 3 -0.0415802
TMEM165 transmembrane protein 165 -0.0410988
RYR3 ryanodine receptor 3 -0.0404093
BBX bobby sox homolog (Drosophila) -0.0399632
BSG basigin (Ok blood group) -0.0397298
RSF1 remodeling and spacing factor 1 -0.03951
GNAS GNAS complex locus -0.0390495
TPM2 tropomyosin 2 (beta) -0.0379694
IFI6 interferon, alpha-inducible protein 6 -0.0376304
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0326463
RPL23 ribosomal protein L23 -0.0323718
RPS21 ribosomal protein S21 -0.0316545
KDM2A lysine (K)-specific demethylase 2A -0.0315677
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0313646
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0297982
PTMS parathymosin -0.0296014
KDM4B lysine (K)-specific demethylase 4B -0.0295496
IGF2 insulin-like growth factor 2 -0.0291458
ZNF292 zinc finger protein 292 -0.0290595
SENP6 SUMO1/sentrin specific peptidase 6 -0.0288971
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E -0.0284492
EPAS1 endothelial PAS domain protein 1 -0.0282121
CSDE1 cold shock domain containing E1, RNA-binding -0.0281477
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 -0.0281219
CCND2 cyclin D2 -0.0280993
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0276215
PHF21A PHD finger protein 21A -0.0272277
SEPTIN7 septin 7 -0.0269254
CBX3 chromobox homolog 3 -0.0265861
PTMA prothymosin, alpha -0.026569
KMT2A lysine (K)-specific methyltransferase 2A -0.0263307
TPM4 tropomyosin 4 -0.0257224
UBXN4 UBX domain protein 4 -0.0256457
ANKRD12 ankyrin repeat domain 12 -0.0255355
EHBP1 EH domain binding protein 1 -0.0254853
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0253265
TAGLN2 transgelin 2 -0.025279
ZMYND8 zinc finger, MYND-type containing 8 -0.0252086
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0250144
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0249221
PRELID2 PRELI domain containing 2 -0.0248951
S100A11 S100 calcium binding protein A11 -0.024872
PPIG peptidylprolyl isomerase G (cyclophilin G) -0.0246887
HELZ helicase with zinc finger -0.0242217
GATAD2B GATA zinc finger domain containing 2B -0.0240687
MT2A metallothionein 2A -0.0239074
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0236829
HLA-A major histocompatibility complex, class I, A -0.023471
SOS2 son of sevenless homolog 2 (Drosophila) -0.0233946
AFF3 AF4/FMR2 family, member 3 -0.0233849
HDGF hepatoma-derived growth factor -0.0233499
ATXN1 ataxin 1 -0.0229094
S100A6 S100 calcium binding protein A6 -0.0228115
LOC112694756 uncharaterized LOC112694756 -0.0224553
PDIA4 protein disulfide isomerase family A, member 4 -0.0223055
PFKP phosphofructokinase, platelet -0.0220327
NUP58 nucleoporin 58 -0.0220091
GORASP2 golgi reassembly stacking protein 2, 55kDa -0.0219676
ICAM1 intercellular adhesion molecule 1 -0.021899
ATP5F1E ATP synthase F1 subunit epsilon -0.0217181
MYL12B myosin, light chain 12B, regulatory -0.0215704
NCOR1 nuclear receptor corepressor 1 -0.0215534
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0215052
RBM25 RNA binding motif protein 25 -0.0214798
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0214183
RPS19 ribosomal protein S19 -0.0214055
FMN1 formin 1 -0.021388
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0212764
LDHA lactate dehydrogenase A -0.0211913
MTA3 metastasis associated 1 family, member 3 -0.0211389
RNF213 ring finger protein 213 -0.0211278
RPL37 ribosomal protein L37 -0.0211002
SET SET nuclear proto-oncogene -0.0210115
YBX1 Y box binding protein 1 -0.0206361
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0205615
S100A10 S100 calcium binding protein A10 -0.0205609
PDIA6 protein disulfide isomerase family A, member 6 -0.0203471
SLC38A1 solute carrier family 38, member 1 -0.0202657
RNF38 ring finger protein 38 -0.020145
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0201204
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0200591
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit -0.0199855
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0197551
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0197063
KDM2B lysine (K)-specific demethylase 2B -0.0194984
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0194308
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0194019
CALR calreticulin -0.0193728