Mitoxantrone (dihydrochloride)_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mitoxantrone (dihydrochloride) perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mitoxantrone (dihydrochloride)_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TRIO trio Rho guanine nucleotide exchange factor 0.204415
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.170946
MYH9 myosin, heavy chain 9, non-muscle 0.138
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.134125
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.105226
FNDC3B fibronectin type III domain containing 3B 0.104733
NAV2 neuron navigator 2 0.0950103
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0949712
HDAC9 histone deacetylase 9 0.0947746
PDE10A phosphodiesterase 10A 0.0928826
ATXN1 ataxin 1 0.0834451
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0824497
FNIP1 folliculin interacting protein 1 0.0803022
CDH13 cadherin 13 0.0750456
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0729508
COL6A3 collagen, type VI, alpha 3 0.0721332
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0715507
DST dystonin 0.0687587
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.0664871
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.064634
CD44 CD44 molecule (Indian blood group) 0.0646042
JMJD1C jumonji domain containing 1C 0.0636767
PRELID2 PRELI domain containing 2 0.0629172
FMNL2 formin-like 2 0.0622335
ASPH aspartate beta-hydroxylase 0.0619406
ZSWIM6 zinc finger, SWIM-type containing 6 0.0604635
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0565789
SDK1 sidekick cell adhesion molecule 1 0.054534
MYOF myoferlin 0.0529269
MACF1 microtubule-actin crosslinking factor 1 0.0524258
ZMIZ1 zinc finger, MIZ-type containing 1 0.0514488
AKAP12 A kinase (PRKA) anchor protein 12 0.0511148
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0507013
APLP2 amyloid beta (A4) precursor-like protein 2 0.0505816
TNS3 tensin 3 0.0497069
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0489804
TMEM132D transmembrane protein 132D 0.048849
AFF3 AF4/FMR2 family, member 3 0.0486063
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.048262
RAB7A RAB7A, member RAS oncogene family 0.0468234
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0464444
KDM4C lysine (K)-specific demethylase 4C 0.0460811
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0456195
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0455496
INTS6 integrator complex subunit 6 0.0448153
EXOC4 exocyst complex component 4 0.0447374
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.043101
SMYD3 SET and MYND domain containing 3 0.0423461
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0416817
UTRN utrophin 0.0414976
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0414335
BACE2 beta-site APP-cleaving enzyme 2 0.0413896
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0410372
CANX calnexin 0.0404437
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0402284
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.040146
FRMPD4 FERM and PDZ domain containing 4 0.0393053
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0391576
SEPTIN9 septin 9 0.0385259
CADM1 cell adhesion molecule 1 0.038513
DUSP10 dual specificity phosphatase 10 0.0383757
RUNX1 runt-related transcription factor 1 0.0379849
RND3 Rho family GTPase 3 0.0378826
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0373732
ZBTB38 zinc finger and BTB domain containing 38 0.037355
RAD51B RAD51 paralog B 0.0370337
COL5A1 collagen, type V, alpha 1 0.0370235
DIAPH2 diaphanous-related formin 2 0.0368871
VEGFA vascular endothelial growth factor A 0.0366324
PRKCA protein kinase C, alpha 0.0365073
ERRFI1 ERBB receptor feedback inhibitor 1 0.0362741
ENO1 enolase 1, (alpha) 0.0361927
ESYT2 extended synaptotagmin-like protein 2 0.0360378
LPP LIM domain containing preferred translocation partner in lipoma 0.035786
MSN moesin 0.0356949
IGF1R insulin-like growth factor 1 receptor 0.0355017
HELZ helicase with zinc finger 0.0354694
NDRG1 N-myc downstream regulated 1 0.0350675
FBXO32 F-box protein 32 0.034993
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0344735
PCBP3 poly(rC) binding protein 3 0.0343983
SQSTM1 sequestosome 1 0.0341717
GLS2 glutaminase 2 (liver, mitochondrial) 0.0332868
TENT5A terminal nucleotidyltransferase 5A 0.0332303
PGM3 phosphoglucomutase 3 0.0330558
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0329275
TNIK TRAF2 and NCK interacting kinase 0.0322787
MBNL2 muscleblind-like splicing regulator 2 0.0322476
GOLGA4 golgin A4 0.0322143
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0321955
PPARD peroxisome proliferator-activated receptor delta 0.0320656
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0320107
ZNF638 zinc finger protein 638 0.0319432
MMP12 matrix metallopeptidase 12 0.0316412
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0311726
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.030864
VMP1 vacuole membrane protein 1 0.0307931
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0307926
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.03073
PICALM phosphatidylinositol binding clathrin assembly protein 0.0307039

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.13118
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.107396
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.103458
HLA-B major histocompatibility complex, class I, B -0.100744
FN1 fibronectin 1 -0.0816547
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.065213
BICC1 BicC family RNA binding protein 1 -0.059558
HLA-A major histocompatibility complex, class I, A -0.0571214
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0541662
FTH1 ferritin, heavy polypeptide 1 -0.0510498
NAMPT nicotinamide phosphoribosyltransferase -0.0461275
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0449348
EIF1 eukaryotic translation initiation factor 1 -0.0433281
LOC112694756 uncharaterized LOC112694756 -0.0420477
TMSB10 thymosin beta 10 -0.0371354
IFI6 interferon, alpha-inducible protein 6 -0.0368277
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0357272
TUBB tubulin, beta class I -0.0355408
KPNB1 karyopherin (importin) beta 1 -0.0338183
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0331607
CTSD cathepsin D -0.0331229
THBS1 thrombospondin 1 -0.0327313
PALLD palladin, cytoskeletal associated protein -0.0321744
UBC ubiquitin C -0.0311115
RIGI RNA sensor RIG-I -0.0309219
OSMR oncostatin M receptor -0.0306712
GNAS GNAS complex locus -0.0283582
UGCG UDP-glucose ceramide glucosyltransferase -0.0281657
EGR1 early growth response 1 -0.0280945
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0272346
VCL vinculin -0.0266871
MKI67 marker of proliferation Ki-67 -0.0265659
KLF6 Kruppel-like factor 6 -0.0258011
RPL23 ribosomal protein L23 -0.0257256
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.025094
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0244307
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0242867
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0238804
RNF213 ring finger protein 213 -0.0236549
DCBLD1 discoidin, CUB and LCCL domain containing 1 -0.0233167
FTL ferritin, light polypeptide -0.0230375
LDHA lactate dehydrogenase A -0.022443
TRIM22 tripartite motif containing 22 -0.0223266
HLA-E major histocompatibility complex, class I, E -0.0215786
IL6 interleukin 6 -0.0214745
GLIS3 GLIS family zinc finger 3 -0.0210903
TPT1 tumor protein, translationally-controlled 1 -0.0204829
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.020401
PLPP6 phospholipid phosphatase 6 -0.0203532
IGFBP3 insulin-like growth factor binding protein 3 -0.0195823
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0193845
TNNC1 troponin C type 1 (slow) -0.0192432
RUNX2 runt-related transcription factor 2 -0.0191577
IFI16 interferon, gamma-inducible protein 16 -0.0191542
ZNFX1 zinc finger, NFX1-type containing 1 -0.0191336
NRN1 neuritin 1 -0.0190306
LOX lysyl oxidase -0.0188042
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0186956
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.018687
WSB1 WD repeat and SOCS box containing 1 -0.0186303
RPL12 ribosomal protein L12 -0.0185834
PMP22 peripheral myelin protein 22 -0.0184315
PTPRF protein tyrosine phosphatase, receptor type, F -0.0183031
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0182586
ASTN2 astrotactin 2 -0.0182463
JAK2 Janus kinase 2 -0.0178106
KYNU kynureninase -0.0176928
RPS21 ribosomal protein S21 -0.0176836
RTN4 reticulon 4 -0.0176097
GOPC golgi-associated PDZ and coiled-coil motif containing -0.0175605
SAMHD1 SAM domain and HD domain 1 -0.0173848
RPL36A ribosomal protein L36a -0.0173761
CFB complement factor B -0.0173723
WDR45B WD repeat domain 45B -0.0173344
ACTG1 actin gamma 1 -0.017251
GBP2 guanylate binding protein 2, interferon-inducible -0.0170295
C3 complement component 3 -0.0168624
GREM1 gremlin 1, DAN family BMP antagonist -0.0167312
THBS2 thrombospondin 2 -0.0167035
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0165987
RPLP0 ribosomal protein, large, P0 -0.0164565
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0164343
IFITM3 interferon induced transmembrane protein 3 -0.0162604
CALD1 caldesmon 1 -0.0162493
RACK1 receptor for activated C kinase 1 -0.0161169
NCOA7 nuclear receptor coactivator 7 -0.0158895
ANLN anillin, actin binding protein -0.0158858
PRR11 proline rich 11 -0.0155386
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 -0.0154516
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0154411
ZMYND8 zinc finger, MYND-type containing 8 -0.0154394
CDCP1 CUB domain containing protein 1 -0.0153967
TMEM41B transmembrane protein 41B -0.0153964
RAD21 RAD21 homolog (S. pombe) -0.0153842
MAP1B microtubule-associated protein 1B -0.0152556
SH3RF2 SH3 domain containing ring finger 2 -0.0151029
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0149714
HLA-C major histocompatibility complex, class I, C -0.0148107
CDK17 cyclin-dependent kinase 17 -0.0145983
DENND5A DENN/MADD domain containing 5A -0.0145596