Mitoxantrone (dihydrochloride)_SW1417 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Mitoxantrone (dihydrochloride) perturbation in SW1417 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Mitoxantrone (dihydrochloride)_SW1417 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.160357
NEBL nebulette 0.0955469
EPS8 epidermal growth factor receptor pathway substrate 8 0.0948547
VMP1 vacuole membrane protein 1 0.0867618
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0633251
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.063113
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0619379
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0612717
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0603397
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0599423
SMAD3 SMAD family member 3 0.0596027
DSPP dentin sialophosphoprotein 0.0584601
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0576878
VCL vinculin 0.0575804
AKAP13 A kinase (PRKA) anchor protein 13 0.0564433
YAP1 Yes-associated protein 1 0.0559113
SAMD4A sterile alpha motif domain containing 4A 0.0544742
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0527248
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0517821
MYO1E myosin IE 0.0517391
SNX9 sorting nexin 9 0.0497828
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0490886
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0467871
HSPA8 heat shock 70kDa protein 8 0.0461212
UBE2H ubiquitin-conjugating enzyme E2H 0.0447845
FAT1 FAT atypical cadherin 1 0.0447788
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0435866
MED13L mediator complex subunit 13-like 0.0431714
ARHGAP42 Rho GTPase activating protein 42 0.0423686
DIAPH1 diaphanous-related formin 1 0.0409027
IFRD1 interferon-related developmental regulator 1 0.0403252
TOP1 topoisomerase (DNA) I 0.0398029
SON SON DNA binding protein 0.0397833
DSCAM Down syndrome cell adhesion molecule 0.0396464
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0396299
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.038978
TSC22D2 TSC22 domain family, member 2 0.0389711
PUM2 pumilio RNA-binding family member 2 0.0387915
NCEH1 neutral cholesterol ester hydrolase 1 0.0383905
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0383013
DST dystonin 0.0380855
GSK3B glycogen synthase kinase 3 beta 0.0379554
SDC4 syndecan 4 0.0372682
ETV6 ets variant 6 0.0371394
TRIM2 tripartite motif containing 2 0.0370894
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.036155
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0353361
MATR3 matrin 3 0.0353239
CKAP5 cytoskeleton associated protein 5 0.0352577
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0351129
APLP2 amyloid beta (A4) precursor-like protein 2 0.0350466
KDM6A lysine (K)-specific demethylase 6A 0.0349223
KRT20 keratin 20, type I 0.0347891
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0346156
MALT1 MALT1 paracaspase 0.0343139
PCLO piccolo presynaptic cytomatrix protein 0.0336767
RBM39 RNA binding motif protein 39 0.0336757
GLS2 glutaminase 2 (liver, mitochondrial) 0.0335573
MACF1 microtubule-actin crosslinking factor 1 0.0334823
KAT6A K(lysine) acetyltransferase 6A 0.0334687
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0332192
FAM3C family with sequence similarity 3, member C 0.0330941
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0330281
CSNK1A1 casein kinase 1, alpha 1 0.0327675
ADAM19 ADAM metallopeptidase domain 19 0.0325207
NEK7 NIMA-related kinase 7 0.0322008
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0319559
TRA2A transformer 2 alpha homolog (Drosophila) 0.031531
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0315158
NHSL1 NHS-like 1 0.031484
EHF ets homologous factor 0.0314827
HMGN2 high mobility group nucleosomal binding domain 2 0.0314768
OSBPL10 oxysterol binding protein-like 10 0.0313861
AFDN afadin, adherens junction formation factor 0.0310364
WWC1 WW and C2 domain containing 1 0.0309828
NCKAP1 NCK-associated protein 1 0.0307941
TRIP12 thyroid hormone receptor interactor 12 0.0302414
USP9X ubiquitin specific peptidase 9, X-linked 0.030136
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0299497
DOCK4 dedicator of cytokinesis 4 0.0299272
EGFR epidermal growth factor receptor 0.0298364
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0292658
PDLIM5 PDZ and LIM domain 5 0.0291333
MYH9 myosin, heavy chain 9, non-muscle 0.0291211
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) 0.0290524
NCOA1 nuclear receptor coactivator 1 0.028737
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0286619
ITPRID2 ITPR interacting domain containing 2 0.0286463
EXOC6B exocyst complex component 6B 0.0285662
NAMPT nicotinamide phosphoribosyltransferase 0.0285371
ZFC3H1 zinc finger, C3H1-type containing 0.0285156
FNDC3A fibronectin type III domain containing 3A 0.0283754
PTPRK protein tyrosine phosphatase, receptor type, K 0.0282804
BRD2 bromodomain containing 2 0.0282634
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0280838
RND3 Rho family GTPase 3 0.0279247
PAPOLA poly(A) polymerase alpha 0.0278988
OXR1 oxidation resistance 1 0.0278129
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0277612
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0274851

decreased expression

Symbol Name Standardized Value
MAML2 mastermind-like 2 (Drosophila) -0.174354
PTMA prothymosin, alpha -0.160485
TMSB10 thymosin beta 10 -0.157692
FTL ferritin, light polypeptide -0.110514
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.107131
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.10663
NDRG1 N-myc downstream regulated 1 -0.0923652
RPS6 ribosomal protein S6 -0.0810514
RPL35A ribosomal protein L35a -0.077002
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0725414
EGR1 early growth response 1 -0.0717823
FTH1 ferritin, heavy polypeptide 1 -0.0712366
RPS21 ribosomal protein S21 -0.0703112
SDK1 sidekick cell adhesion molecule 1 -0.0699301
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0666627
TPT1 tumor protein, translationally-controlled 1 -0.0594867
KRT8 keratin 8, type II -0.05721
AHNAK AHNAK nucleoprotein -0.0557855
ZMYND8 zinc finger, MYND-type containing 8 -0.0554596
KRT18 keratin 18, type I -0.0541781
GMDS GDP-mannose 4,6-dehydratase -0.0533159
LDHA lactate dehydrogenase A -0.0527631
LOC112694756 uncharaterized LOC112694756 -0.0525432
ITGB4 integrin, beta 4 -0.0521008
RPLP1 ribosomal protein, large, P1 -0.0513959
TIMP2 TIMP metallopeptidase inhibitor 2 -0.049393
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.047956
GNAS GNAS complex locus -0.0459228
RPS13 ribosomal protein S13 -0.0456316
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0453819
HM13 histocompatibility (minor) 13 -0.0449761
RPL23 ribosomal protein L23 -0.0440931
ACTN4 actinin, alpha 4 -0.0438734
NFIA nuclear factor I/A -0.0418628
RPS19 ribosomal protein S19 -0.0416189
RPLP2 ribosomal protein, large, P2 -0.0401993
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0400418
TPM4 tropomyosin 4 -0.0397118
KRT19 keratin 19, type I -0.0384731
PKM pyruvate kinase, muscle -0.0381871
CCND1 cyclin D1 -0.0380636
FRMD5 FERM domain containing 5 -0.0376593
S100A6 S100 calcium binding protein A6 -0.0370249
CTSD cathepsin D -0.0369972
IFITM1 interferon induced transmembrane protein 1 -0.0369222
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0365297
GARS1 glycyl-tRNA synthetase 1 -0.0358909
GTF2IRD1 GTF2I repeat domain containing 1 -0.0351477
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0350651
RPL31 ribosomal protein L31 -0.0347303
SOX4 SRY (sex determining region Y)-box 4 -0.0340408
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0335003
RPS25 ribosomal protein S25 -0.0332871
ANO1 anoctamin 1, calcium activated chloride channel -0.0331583
RPS11 ribosomal protein S11 -0.0330908
JUP junction plakoglobin -0.032797
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B -0.0326406
IER3 immediate early response 3 -0.0325573
HLA-A major histocompatibility complex, class I, A -0.0325272
DLG1 discs, large homolog 1 (Drosophila) -0.0325256
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 -0.0317788
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0317081
SRRM3 serine/arginine repetitive matrix 3 -0.031477
CLIP2 CAP-GLY domain containing linker protein 2 -0.0308406
CBX3 chromobox homolog 3 -0.0308108
RPS24 ribosomal protein S24 -0.0307884
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 -0.0305438
CADPS Ca++-dependent secretion activator -0.030301
RPS14 ribosomal protein S14 -0.030001
PGK1 phosphoglycerate kinase 1 -0.0294463
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0294379
XYLT1 xylosyltransferase I -0.0291135
MAP4 microtubule-associated protein 4 -0.0291116
UNC13A unc-13 homolog A (C. elegans) -0.028966
TMEM47 transmembrane protein 47 -0.0289382
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0288984
TMEM123 transmembrane protein 123 -0.0287195
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0284336
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0283935
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0278327
RPL28 ribosomal protein L28 -0.0278251
ARL4C ADP-ribosylation factor-like 4C -0.027642
DNM2 dynamin 2 -0.027642
RPL34 ribosomal protein L34 -0.0271962
RPS5 ribosomal protein S5 -0.0271463
RPL37A ribosomal protein L37a -0.0270062
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0269312
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0265031
RPL32 ribosomal protein L32 -0.0264384
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0262196
C6ORF132 chromosome 6 open reading frame 132 -0.0257716
TMCC1 transmembrane and coiled-coil domain family 1 -0.0257601
IFITM3 interferon induced transmembrane protein 3 -0.0255519
HMGA1 high mobility group AT-hook 1 -0.025468
LLGL2 lethal giant larvae homolog 2 (Drosophila) -0.0253808
ONECUT3 one cut homeobox 3 -0.0253789
ESRP1 epithelial splicing regulatory protein 1 -0.025348
SLCO4A1 solute carrier organic anion transporter family, member 4A1 -0.0252628
SBF2 SET binding factor 2 -0.0251644
ZBTB20 zinc finger and BTB domain containing 20 -0.0251336