Monocrotaline_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Monocrotaline perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Monocrotaline_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.268286
FAM13A family with sequence similarity 13, member A 0.0709719
HELZ helicase with zinc finger 0.0671852
LPIN1 lipin 1 0.0577979
ZNF292 zinc finger protein 292 0.0577314
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0538727
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0469489
NAMPT nicotinamide phosphoribosyltransferase 0.0452626
OGA O-GlcNAcase 0.0441991
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0436942
KDM3A lysine (K)-specific demethylase 3A 0.0417965
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0391018
DSCAM Down syndrome cell adhesion molecule 0.038745
MEF2A myocyte enhancer factor 2A 0.0360312
ANXA2 annexin A2 0.0349965
XPO1 exportin 1 0.0336023
DDIT4 DNA-damage-inducible transcript 4 0.0331874
MAP1B microtubule-associated protein 1B 0.0331148
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0325794
NPEPPS aminopeptidase puromycin sensitive 0.032237
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0321329
PKM pyruvate kinase, muscle 0.0312335
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0310068
MARCHF6 membrane associated ring-CH-type finger 6 0.0306319
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0303134
SSBP2 single-stranded DNA binding protein 2 0.0299649
UBA6 ubiquitin-like modifier activating enzyme 6 0.0295316
WDR45B WD repeat domain 45B 0.0288751
SPAG9 sperm associated antigen 9 0.0287928
ITPRID2 ITPR interacting domain containing 2 0.028686
KMT2E lysine (K)-specific methyltransferase 2E 0.0281674
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0280825
PICALM phosphatidylinositol binding clathrin assembly protein 0.0279127
SETD5 SET domain containing 5 0.0277731
HMGB2 high mobility group box 2 0.0274505
MATR3 matrin 3 0.027093
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0270595
WAC WW domain containing adaptor with coiled-coil 0.0269277
RAD21 RAD21 homolog (S. pombe) 0.0266654
MXI1 MAX interactor 1, dimerization protein 0.0263743
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0259239
SUCO SUN domain containing ossification factor 0.0253449
SRP54 signal recognition particle 54kDa 0.0251184
RNF145 ring finger protein 145 0.025028
NUP58 nucleoporin 58 0.0247813
CDC27 cell division cycle 27 0.0243264
RHOA ras homolog family member A 0.0243166
NFE2L1 nuclear factor, erythroid 2-like 1 0.024256
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0242487
RSRC2 arginine/serine-rich coiled-coil 2 0.0242304
RTN4 reticulon 4 0.0238908
YEATS2 YEATS domain containing 2 0.0237583
SLMAP sarcolemma associated protein 0.0235487
P4HB prolyl 4-hydroxylase, beta polypeptide 0.023263
CSNK1G1 casein kinase 1, gamma 1 0.023081
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0229318
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0229015
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0227804
NCKAP1 NCK-associated protein 1 0.0227639
SOX9 SRY (sex determining region Y)-box 9 0.0227612
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0223214
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0221531
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0220386
CHD1 chromodomain helicase DNA binding protein 1 0.0219837
UBE2O ubiquitin-conjugating enzyme E2O 0.0219727
YME1L1 YME1-like 1 ATPase 0.0219471
GOLGA4 golgin A4 0.0219191
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0217789
EIF4A2 eukaryotic translation initiation factor 4A2 0.0217526
CASC3 cancer susceptibility candidate 3 0.0215669
YTHDC1 YTH domain containing 1 0.0214388
TOP1 topoisomerase (DNA) I 0.021294
SEC31A SEC31 homolog A (S. cerevisiae) 0.021237
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0211082
SEPTIN7 septin 7 0.0208679
UBA2 ubiquitin-like modifier activating enzyme 2 0.0208322
USP3 ubiquitin specific peptidase 3 0.0207624
QKI QKI, KH domain containing, RNA binding 0.0207402
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0207091
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 0.0203988
KMT2C lysine (K)-specific methyltransferase 2C 0.0203743
IST1 increased sodium tolerance 1 homolog (yeast) 0.0203243
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0203179
COPS2 COP9 signalosome subunit 2 0.0202625
NEK7 NIMA-related kinase 7 0.0201735
LCORL ligand dependent nuclear receptor corepressor-like 0.0201098
CCNY cyclin Y 0.0200808
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0200177
CD36 CD36 molecule (thrombospondin receptor) 0.0199949
GNA13 guanine nucleotide binding protein (G protein), alpha 13 0.0197073
AFDN afadin, adherens junction formation factor 0.0196186
WDR36 WD repeat domain 36 0.0195072
UBC ubiquitin C 0.0194974
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0192242
APP amyloid beta (A4) precursor protein 0.0191132
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.0190524
TRA2A transformer 2 alpha homolog (Drosophila) 0.018976
ZFAND3 zinc finger, AN1-type domain 3 0.0187356
USPL1 ubiquitin specific peptidase like 1 0.0186252
ADAM9 ADAM metallopeptidase domain 9 0.0184489

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.369802
LSAMP limbic system-associated membrane protein -0.19431
NRG1 neuregulin 1 -0.182366
NALF1 NALCN channel auxiliary factor 1 -0.176688
VCL vinculin -0.122495
PTPRD protein tyrosine phosphatase, receptor type, D -0.121347
FMN1 formin 1 -0.0961609
THSD4 thrombospondin, type I, domain containing 4 -0.0917532
EXT1 exostosin glycosyltransferase 1 -0.0901768
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0810455
BCAS3 breast carcinoma amplified sequence 3 -0.0733583
BPTF bromodomain PHD finger transcription factor -0.0724013
ZNF804A zinc finger protein 804A -0.0681378
RNF213 ring finger protein 213 -0.0627479
SLIT2 slit homolog 2 (Drosophila) -0.0608031
CRH corticotropin releasing hormone -0.0551974
PRKCA protein kinase C, alpha -0.0537585
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0521803
KLHL13 kelch-like family member 13 -0.0512423
MAPK10 mitogen-activated protein kinase 10 -0.0510361
ANTXR1 anthrax toxin receptor 1 -0.0510257
CADM2 cell adhesion molecule 2 -0.0508045
PLAT plasminogen activator, tissue -0.0502793
NREP neuronal regeneration related protein -0.0500049
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0494225
GREM2 gremlin 2, DAN family BMP antagonist -0.0487079
ZBTB20 zinc finger and BTB domain containing 20 -0.0484718
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0484349
SYT1 synaptotagmin I -0.0480965
COL4A5 collagen, type IV, alpha 5 -0.0475994
RAD51B RAD51 paralog B -0.0460458
CPED1 cadherin-like and PC-esterase domain containing 1 -0.045521
COL1A1 collagen, type I, alpha 1 -0.0454965
DNM3 dynamin 3 -0.043141
PTPRM protein tyrosine phosphatase, receptor type, M -0.0420731
PTPRK protein tyrosine phosphatase, receptor type, K -0.0419413
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0410933
DNAH14 dynein, axonemal, heavy chain 14 -0.040709
LRP1B low density lipoprotein receptor-related protein 1B -0.0405728
BICD1 bicaudal D homolog 1 (Drosophila) -0.040066
TPM1 tropomyosin 1 (alpha) -0.0389153
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0384713
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0381253
AKAP12 A kinase (PRKA) anchor protein 12 -0.0376207
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0367952
FNDC3A fibronectin type III domain containing 3A -0.0367915
TMSB10 thymosin beta 10 -0.0365483
RPL35A ribosomal protein L35a -0.0365146
ACTG1 actin gamma 1 -0.0362149
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0359179
EGR1 early growth response 1 -0.035675
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0349201
GLCCI1 glucocorticoid induced 1 -0.0346119
CUX1 cut-like homeobox 1 -0.0336213
VMP1 vacuole membrane protein 1 -0.0334984
RPL23 ribosomal protein L23 -0.0333378
CEMIP cell migration inducing protein, hyaluronan binding -0.0328587
DACH2 dachshund family transcription factor 2 -0.0327738
STK38L serine/threonine kinase 38 like -0.0324953
LPP LIM domain containing preferred translocation partner in lipoma -0.0321199
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 -0.0315542
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0314409
RPL34 ribosomal protein L34 -0.0308908
IGFBP3 insulin-like growth factor binding protein 3 -0.0307571
CNTN4 contactin 4 -0.0306025
KCNIP4 Kv channel interacting protein 4 -0.0302287
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.030199
SOX4 SRY (sex determining region Y)-box 4 -0.0301682
NPAS2 neuronal PAS domain protein 2 -0.0299583
PDZRN3 PDZ domain containing ring finger 3 -0.0295111
UNC5C unc-5 homolog C (C. elegans) -0.0294435
IGFBP5 insulin-like growth factor binding protein 5 -0.0292525
EFNA5 ephrin-A5 -0.0291024
FHIT fragile histidine triad -0.0284666
TLE4 transducin-like enhancer of split 4 -0.0283823
MBD5 methyl-CpG binding domain protein 5 -0.0283807
TRIO trio Rho guanine nucleotide exchange factor -0.0278319
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0278275
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0274485
SIK2 salt-inducible kinase 2 -0.0274424
FERMT2 fermitin family member 2 -0.0273614
RAP1B RAP1B, member of RAS oncogene family -0.0272556
PCDH9 protocadherin 9 -0.0269461
PCDH15 protocadherin-related 15 -0.0268755
MX2 MX dynamin-like GTPase 2 -0.0266196
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0266178
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0265807
RIGI RNA sensor RIG-I -0.0265007
PTPRE protein tyrosine phosphatase, receptor type, E -0.0264805
TPT1 tumor protein, translationally-controlled 1 -0.0262815
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 -0.0261027
SP100 SP100 nuclear antigen -0.0255596
DIAPH2 diaphanous-related formin 2 -0.0254782
SMYD3 SET and MYND domain containing 3 -0.0252756
TRPS1 trichorhinophalangeal syndrome I -0.0250013
PCNX4 pecanex 4 -0.0248177
CACNB2 calcium channel, voltage-dependent, beta 2 subunit -0.0246981
PDE10A phosphodiesterase 10A -0.0245462
RPTOR regulatory associated protein of MTOR, complex 1 -0.0245299
PBX1 pre-B-cell leukemia homeobox 1 -0.0244875