Monocrotaline_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Monocrotaline perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Monocrotaline_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.109971
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0716299
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.061952
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0522
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0490581
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0480529
TXNRD1 thioredoxin reductase 1 0.0412989
OGA O-GlcNAcase 0.0389129
RPS12 ribosomal protein S12 0.0374181
YBX1 Y box binding protein 1 0.03605
NAP1L1 nucleosome assembly protein 1-like 1 0.0359562
PCBP2 poly(rC) binding protein 2 0.0341828
SMC4 structural maintenance of chromosomes 4 0.0336965
ZCCHC7 zinc finger, CCHC domain containing 7 0.033114
RTN4 reticulon 4 0.0299708
PHIP pleckstrin homology domain interacting protein 0.02957
COPA coatomer protein complex, subunit alpha 0.0295058
RPL37A ribosomal protein L37a 0.0292916
XPO1 exportin 1 0.0291259
RPLP0 ribosomal protein, large, P0 0.02827
RPS3 ribosomal protein S3 0.0282045
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0280814
TRIO trio Rho guanine nucleotide exchange factor 0.0279595
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0276532
RPL37 ribosomal protein L37 0.0266991
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.026624
CEP192 centrosomal protein 192kDa 0.0261264
CSDE1 cold shock domain containing E1, RNA-binding 0.026103
RPS8 ribosomal protein S8 0.0253426
MARCHF4 membrane associated ring-CH-type finger 4 0.0248451
BBX bobby sox homolog (Drosophila) 0.0248241
RRM2 ribonucleotide reductase M2 0.024454
RPL12 ribosomal protein L12 0.0243576
RPL23 ribosomal protein L23 0.0240007
GOLGA4 golgin A4 0.0238757
RBM25 RNA binding motif protein 25 0.0227286
PNN pinin, desmosome associated protein 0.0222341
RPLP1 ribosomal protein, large, P1 0.0222288
GARS1 glycyl-tRNA synthetase 1 0.0219918
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0217581
KTN1 kinectin 1 (kinesin receptor) 0.0216412
SFPQ splicing factor proline/glutamine-rich 0.0216384
LDHB lactate dehydrogenase B 0.0216065
EIF1 eukaryotic translation initiation factor 1 0.0215136
TPX2 TPX2, microtubule-associated 0.0213045
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0210723
RPL5 ribosomal protein L5 0.0209879
CENPF centromere protein F, 350/400kDa 0.0209316
SET SET nuclear proto-oncogene 0.0208191
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0205448
MORF4L2 mortality factor 4 like 2 0.02018
KMT2E lysine (K)-specific methyltransferase 2E 0.0198778
PDIA6 protein disulfide isomerase family A, member 6 0.0197977
TPM3 tropomyosin 3 0.0197867
RPS4X ribosomal protein S4, X-linked 0.0196768
SRP54 signal recognition particle 54kDa 0.0193607
RPL26 ribosomal protein L26 0.0190615
DIAPH3 diaphanous-related formin 3 0.0189978
ADAM17 ADAM metallopeptidase domain 17 0.0188862
RPS18 ribosomal protein S18 0.0188814
VIM vimentin 0.0187133
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0185769
NCAPG2 non-SMC condensin II complex, subunit G2 0.0185523
ZNF292 zinc finger protein 292 0.0182969
RB1CC1 RB1-inducible coiled-coil 1 0.0182538
PPME1 protein phosphatase methylesterase 1 0.0182036
SEPTIN7 septin 7 0.0181415
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0180994
RSRC2 arginine/serine-rich coiled-coil 2 0.0180395
PREPL prolyl endopeptidase-like 0.0179022
MIS18BP1 MIS18 binding protein 1 0.0178679
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0176692
SPAG9 sperm associated antigen 9 0.0176167
FXR1 fragile X mental retardation, autosomal homolog 1 0.0173196
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.016853
RACK1 receptor for activated C kinase 1 0.0167737
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.016717
NCAPD2 non-SMC condensin I complex, subunit D2 0.0166672
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0164727
ANLN anillin, actin binding protein 0.0162126
COG5 component of oligomeric golgi complex 5 0.0162002
AKAP9 A kinase (PRKA) anchor protein 9 0.0161518
PGK1 phosphoglycerate kinase 1 0.0160719
CAMTA1 calmodulin binding transcription activator 1 0.0160467
CAMKMT calmodulin-lysine N-methyltransferase 0.0159414
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.0158431
RLF rearranged L-myc fusion 0.0157954
NUSAP1 nucleolar and spindle associated protein 1 0.015793
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0157608
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0157101
EEF2 eukaryotic translation elongation factor 2 0.0156349
ESYT2 extended synaptotagmin-like protein 2 0.0154396
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0154133
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0153985
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.0153263
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0152251
GPSM2 G-protein signaling modulator 2 0.0151011
RNMT RNA (guanine-7-) methyltransferase 0.015071
IQGAP3 IQ motif containing GTPase activating protein 3 0.0149982
NDC80 NDC80 kinetochore complex component 0.0149146

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.46067
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.22281
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.142394
THSD4 thrombospondin, type I, domain containing 4 -0.130726
GRAMD1B GRAM domain containing 1B -0.124283
OSMR oncostatin M receptor -0.120402
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0935208
YBX3 Y box binding protein 3 -0.0916701
PDE4D phosphodiesterase 4D, cAMP-specific -0.0901956
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0769253
PDE10A phosphodiesterase 10A -0.075495
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0710687
HLA-B major histocompatibility complex, class I, B -0.0708038
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0707893
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0707481
NCOA7 nuclear receptor coactivator 7 -0.0698762
IFI6 interferon, alpha-inducible protein 6 -0.0698224
HMGA2 high mobility group AT-hook 2 -0.0669749
IGF1R insulin-like growth factor 1 receptor -0.0634263
RIMS2 regulating synaptic membrane exocytosis 2 -0.0597091
ACTG1 actin gamma 1 -0.0587578
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0585082
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0571282
BASP1 brain abundant, membrane attached signal protein 1 -0.056677
VCL vinculin -0.0560141
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0525095
DOCK5 dedicator of cytokinesis 5 -0.0517839
TPM4 tropomyosin 4 -0.0515844
AFF3 AF4/FMR2 family, member 3 -0.050366
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.049489
ERRFI1 ERBB receptor feedback inhibitor 1 -0.049485
TM4SF1 transmembrane 4 L six family member 1 -0.0490632
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0490596
CDK17 cyclin-dependent kinase 17 -0.0486727
STC1 stanniocalcin 1 -0.0486301
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0478379
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0475769
EML4 echinoderm microtubule associated protein like 4 -0.0467023
RYR3 ryanodine receptor 3 -0.0430939
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0430556
MCL1 myeloid cell leukemia 1 -0.0427463
FNDC3B fibronectin type III domain containing 3B -0.0422609
CUX1 cut-like homeobox 1 -0.0414051
RNF213 ring finger protein 213 -0.039087
EGR1 early growth response 1 -0.0388509
WWTR1 WW domain containing transcription regulator 1 -0.0386051
TMSB10 thymosin beta 10 -0.0384632
PRH1 proline-rich protein HaeIII subfamily 1 -0.0373176
CDCP1 CUB domain containing protein 1 -0.0372959
EGFR epidermal growth factor receptor -0.0372725
FMNL2 formin-like 2 -0.0369787
DENND5B DENN/MADD domain containing 5B -0.0362448
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0361703
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0361396
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0360195
PYGL phosphorylase, glycogen, liver -0.0357709
EXT1 exostosin glycosyltransferase 1 -0.0355834
ITSN1 intersectin 1 (SH3 domain protein) -0.0355397
NF1 neurofibromin 1 -0.0351818
CAVIN1 caveolae associated protein 1 -0.0348663
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0345062
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0343158
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0341613
POTEF POTE ankyrin domain family, member F -0.0339874
IER3 immediate early response 3 -0.0339225
LOXL2 lysyl oxidase-like 2 -0.0338555
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.033758
ATXN1 ataxin 1 -0.0333092
EPAS1 endothelial PAS domain protein 1 -0.032022
ATG7 autophagy related 7 -0.0314258
LATS2 large tumor suppressor kinase 2 -0.031321
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0312361
SVIL supervillin -0.031233
ETV6 ets variant 6 -0.0311708
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0307857
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0301918
SSH2 slingshot protein phosphatase 2 -0.0296683
PTK2 protein tyrosine kinase 2 -0.0292812
CCND1 cyclin D1 -0.029277
BPTF bromodomain PHD finger transcription factor -0.028995
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0289187
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0289094
DNAH14 dynein, axonemal, heavy chain 14 -0.0283158
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0282599
PDLIM5 PDZ and LIM domain 5 -0.0282275
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0279709
ZMYND8 zinc finger, MYND-type containing 8 -0.027669
PHF14 PHD finger protein 14 -0.0270865
IL6ST interleukin 6 signal transducer -0.02675
MMP12 matrix metallopeptidase 12 -0.0266993
BMP5 bone morphogenetic protein 5 -0.0266291
KLF6 Kruppel-like factor 6 -0.0264158
COL5A2 collagen, type V, alpha 2 -0.0254561
IGF2 insulin-like growth factor 2 -0.025383
LOC102724023 ES1 protein homolog, mitochondrial -0.0252437
AHNAK AHNAK nucleoprotein -0.0251083
CLIP1 CAP-GLY domain containing linker protein 1 -0.0247381
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0243735
VMP1 vacuole membrane protein 1 -0.0243298
ELL2 elongation factor, RNA polymerase II, 2 -0.0236604