MyoD Gene Set

Dataset MotifMap Predicted Transcription Factor Targets
Category genomics
Type transcription factor
Description myogenic differentiation 1|This gene encodes a nuclear protein that belongs to the basic helix-loop-helix family of transcription factors and the myogenic factors subfamily. It regulates muscle cell differentiation by inducing cell cycle arrest, a prerequisite for myogenic initiation. The protein is also involved in muscle regeneration. It activates its own transcription which may stabilize commitment to myogenesis. [provided by RefSeq, Jul 2008] (NCBI Entrez Gene Database, 4654)
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Genes

205 target genes of the MyoD transcription factor predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.

Symbol Name
ABCF3 ATP-binding cassette, sub-family F (GCN20), member 3
ACADSB acyl-CoA dehydrogenase, short/branched chain
ADAM11 ADAM metallopeptidase domain 11
ADAMTSL2 ADAMTS-like 2
ADORA1 adenosine A1 receptor
AFTPH aftiphilin
AGO1 argonaute RISC catalytic component 1
ANKRD13B ankyrin repeat domain 13B
ANKRD40 ankyrin repeat domain 40
AP2M1 adaptor-related protein complex 2, mu 1 subunit
ARHGAP36 Rho GTPase activating protein 36
ASB15 ankyrin repeat and SOCS box containing 15
BAK1 BCL2-antagonist/killer 1
BEX2 brain expressed X-linked 2
BTBD11 BTB (POZ) domain containing 11
CA7 carbonic anhydrase VII
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit
CANX calnexin
CAPNS2 calpain, small subunit 2
CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3
CCDC154 coiled-coil domain containing 154
CDC25B cell division cycle 25B
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH20 cadherin 20, type 2
CEP57 centrosomal protein 57kDa
CLDN2 claudin 2
CLDN25 claudin 25
CNGA4 cyclic nucleotide gated channel alpha 4
CNOT3 CCR4-NOT transcription complex, subunit 3
COL1A2 collagen, type I, alpha 2
CPSF3L cleavage and polyadenylation specific factor 3-like
CREB3L2 cAMP responsive element binding protein 3-like 2
CSAD cysteine sulfinic acid decarboxylase
CTSZ cathepsin Z
DCAKD dephospho-CoA kinase domain containing
DENND1B DENN/MADD domain containing 1B
DGKD diacylglycerol kinase, delta 130kDa
DHRS13 dehydrogenase/reductase (SDR family) member 13
DICER1 dicer 1, ribonuclease type III
DLG3 discs, large homolog 3 (Drosophila)
DNMT1 DNA (cytosine-5-)-methyltransferase 1
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
DOCK2 dedicator of cytokinesis 2
EDC4 enhancer of mRNA decapping 4
EFCAB1 EF-hand calcium binding domain 1
EFCAB11 EF-hand calcium binding domain 11
EFCAB5 EF-hand calcium binding domain 5
ENO3 enolase 3 (beta, muscle)
EPDR1 ependymin related 1
FAM134C family with sequence similarity 134, member C
FAM174A family with sequence similarity 174, member A
FAM198A family with sequence similarity 198, member A
FAM46C family with sequence similarity 46, member C
FAM53C family with sequence similarity 53, member C
FBLIM1 filamin binding LIM protein 1
FGF4 fibroblast growth factor 4
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)
FNDC3A fibronectin type III domain containing 3A
FNDC4 fibronectin type III domain containing 4
FOXI1 forkhead box I1
FOXN1 forkhead box N1
FRK fyn-related Src family tyrosine kinase
GBA2 glucosidase, beta (bile acid) 2
GK glycerol kinase
GNAS GNAS complex locus
GPD1L glycerol-3-phosphate dehydrogenase 1-like
GPR88 G protein-coupled receptor 88
GSDMA gasdermin A
GUCY1A3 guanylate cyclase 1, soluble, alpha 3
HABP2 hyaluronan binding protein 2
HIP1R huntingtin interacting protein 1 related
HMX2 H6 family homeobox 2
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1
HOXB8 homeobox B8
HOXD10 homeobox D10
HSD11B2 hydroxysteroid (11-beta) dehydrogenase 2
HTR2C 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled
INPP5J inositol polyphosphate-5-phosphatase J
INPPL1 inositol polyphosphate phosphatase-like 1
INVS inversin
IP6K2 inositol hexakisphosphate kinase 2
IQCJ IQ motif containing J
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
ITGA6 integrin, alpha 6
ITGB4 integrin, beta 4
JAZF1-AS1 JAZF1 antisense RNA 1
KCNB1 potassium channel, voltage gated Shab related subfamily B, member 1
KCNE5 potassium channel, voltage gated subfamily E regulatory beta subunit 5
KIAA0894 KIAA0894 protein
KIAA1522 KIAA1522
KIF5C kinesin family member 5C
KIF7 kinesin family member 7
KIRREL kin of IRRE like (Drosophila)
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KRTAP4-1 keratin associated protein 4-1
LDLRAD4 low density lipoprotein receptor class A domain containing 4
LGALSL lectin, galactoside-binding-like
LGR6 leucine-rich repeat containing G protein-coupled receptor 6
LHFPL3-AS1 LHFPL3 antisense RNA 1
LIMCH1 LIM and calponin homology domains 1
LIN28A lin-28 homolog A (C. elegans)
LINC00238 long intergenic non-protein coding RNA 238
LINC00856 long intergenic non-protein coding RNA 856
LINC00900 long intergenic non-protein coding RNA 900
LMNA lamin A/C
LOC400927 TPTE and PTEN homologous inositol lipid phosphatase pseudogene
LOC643355 uncharacterized LOC643355
LPPR1 lipid phosphate phosphatase-related protein type 1
LTBP4 latent transforming growth factor beta binding protein 4
MAN2C1 mannosidase, alpha, class 2C, member 1
MANEAL mannosidase, endo-alpha-like
MIR10A microRNA 10a
MIR1203 microRNA 1203
MIR142 microRNA 142
MIR212 microRNA 212
MIR3131 microRNA 3131
MIR3621 microRNA 3621
MIR4434 microRNA 4434
MIR759 microRNA 759
MMP11 matrix metallopeptidase 11
MSTO2P misato family member 2, pseudogene
MTF2 metal response element binding transcription factor 2
MTMR4 myotubularin related protein 4
MVB12B multivesicular body subunit 12B
MYL1 myosin, light chain 1, alkali; skeletal, fast
MYLK2 myosin light chain kinase 2
NAMA non-protein coding RNA, associated with MAP kinase pathway and growth arrest
NBL1 neuroblastoma 1, DAN family BMP antagonist
NCDN neurochondrin
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
NEGR1-IT1 NEGR1 intronic transcript 1
NHLH1 nescient helix loop helix 1
NR1H3 nuclear receptor subfamily 1, group H, member 3
NSD1 nuclear receptor binding SET domain protein 1
NTRK2 neurotrophic tyrosine kinase, receptor, type 2
NYAP2 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2
PAK3 p21 protein (Cdc42/Rac)-activated kinase 3
PALLD palladin, cytoskeletal associated protein
PARD3B par-3 family cell polarity regulator beta
PDE4B phosphodiesterase 4B, cAMP-specific
PDGFA platelet-derived growth factor alpha polypeptide
PEPD peptidase D
PER1 period circadian clock 1
PHLDB1 pleckstrin homology-like domain, family B, member 1
PID1 phosphotyrosine interaction domain containing 1
PIK3C2B phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit
PSTPIP1 proline-serine-threonine phosphatase interacting protein 1
PTK2B protein tyrosine kinase 2 beta
PTTG1 pituitary tumor-transforming 1
RAB11FIP4 RAB11 family interacting protein 4 (class II)
RASIP1 Ras interacting protein 1
RHOT1 ras homolog family member T1
RNF157 ring finger protein 157
RNF220 ring finger protein 220
RPS6KL1 ribosomal protein S6 kinase-like 1
RTN3 reticulon 3
SCAMP3 secretory carrier membrane protein 3
SCUBE3 signal peptide, CUB domain, EGF-like 3
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
SERTAD1 SERTA domain containing 1
SFTPC surfactant protein C
SLC12A5 solute carrier family 12 (potassium/chloride transporter), member 5
SLC24A4 solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2
SLC35B1 solute carrier family 35, member B1
SLC38A3 solute carrier family 38, member 3
SLC38A8 solute carrier family 38, member 8
SLC4A3 solute carrier family 4 (anion exchanger), member 3
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMEK2 SMEK homolog 2, suppressor of mek1 (Dictyostelium)
SNORA30 small nucleolar RNA, H/ACA box 30
SNORD68 small nucleolar RNA, C/D box 68
SPATA24 spermatogenesis associated 24
SPRED3 sprouty-related, EVH1 domain containing 3
ST6GALNAC5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
STAC3 SH3 and cysteine rich domain 3
STAT1 signal transducer and activator of transcription 1, 91kDa
STXBP2 syntaxin binding protein 2
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
TAOK2 TAO kinase 2
TBX19 T-box 19
TEAD2 TEA domain family member 2
TEF thyrotrophic embryonic factor
TMCC2 transmembrane and coiled-coil domain family 2
TMEM35 transmembrane protein 35
TMEM41A transmembrane protein 41A
TP73 tumor protein p73
TRAPPC3 trafficking protein particle complex 3
TRIM72 tripartite motif containing 72, E3 ubiquitin protein ligase
TSPAN7 tetraspanin 7
UBXN10 UBX domain protein 10
UGCG UDP-glucose ceramide glucosyltransferase
UNC45B unc-45 homolog B (C. elegans)
UQCRC1 ubiquinol-cytochrome c reductase core protein I
VWA5B2 von Willebrand factor A domain containing 5B2
WNT6 wingless-type MMTV integration site family, member 6
WWC1 WW and C2 domain containing 1
XK X-linked Kx blood group
ZDBF2 zinc finger, DBF-type containing 2
ZNF335 zinc finger protein 335
ZNF385C zinc finger protein 385C
ZNF827 zinc finger protein 827