NCI-H1048 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Small Cell Lung Carcinoma Metastasis (Cell Model Passports, SIDM00654)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00654
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Genes

196 proteins associated with the cell line NCI-H1048 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACADSB acyl-CoA dehydrogenase, short/branched chain
ACIN1 apoptotic chromatin condensation inducer 1
ACSL1 acyl-CoA synthetase long-chain family member 1
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12
ADAR adenosine deaminase, RNA-specific
ADO 2-aminoethanethiol (cysteamine) dioxygenase
AHCTF1 AT hook containing transcription factor 1
ARHGAP30 Rho GTPase activating protein 30
ASB6 ankyrin repeat and SOCS box containing 6
ASPRV1 aspartic peptidase, retroviral-like 1
BAZ1B bromodomain adjacent to zinc finger domain, 1B
BRD1 bromodomain containing 1
CADM4 cell adhesion molecule 4
CARMIL1 capping protein regulator and myosin 1 linker 1
CDC5L cell division cycle 5-like
CDC73 cell division cycle 73
CENPF centromere protein F, 350/400kDa
CHAMP1 chromosome alignment maintaining phosphoprotein 1
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa
CRACR2B calcium release activated channel regulator 2B
CRNKL1 crooked neck pre-mRNA splicing factor 1
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
DENND5B DENN/MADD domain containing 5B
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9
DOCK9 dedicator of cytokinesis 9
EFNA1 ephrin-A1
EHMT1 euchromatic histone-lysine N-methyltransferase 1
ELAVL1 ELAV like RNA binding protein 1
ERH enhancer of rudimentary homolog (Drosophila)
FH fumarate hydratase
FIP1L1 factor interacting with PAPOLA and CPSF1
GPC4 glypican 4
HMGN1 high mobility group nucleosome binding domain 1
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
KAT7 K(lysine) acetyltransferase 7
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1
KHK ketohexokinase (fructokinase)
KIAA0100 KIAA0100
KIAA1107 KIAA1107
KIF18A kinesin family member 18A
KIF1BP KIF1 binding protein
KRT1 keratin 1, type II
KRT10 keratin 10, type I
KRT9 keratin 9, type I
LMNB1 lamin B1
LOC105369345 uncharacterized LOC105369345
LOC105373349 uncharacterized LOC105373349
MATR3 matrin 3
MED21 mediator complex subunit 21
MESTP4 mesoderm specific transcript pseudogene 4
MROH6 maestro heat-like repeat family member 6
NCOA5 nuclear receptor coactivator 5
NT5DC2 5'-nucleotidase domain containing 2
NUP85 nucleoporin 85kDa
OTC ornithine carbamoyltransferase
PER3 period circadian clock 3
PHC2 polyhomeotic homolog 2 (Drosophila)
PHIP pleckstrin homology domain interacting protein
POGZ pogo transposable element with ZNF domain
POLDIP3 polymerase (DNA-directed), delta interacting protein 3
PTBP1 polypyrimidine tract binding protein 1
PYGL phosphorylase, glycogen, liver
RBM15B RNA binding motif protein 15B
RBM22 RNA binding motif protein 22
RBM25 RNA binding motif protein 25
RBM8A RNA binding motif protein 8A
RBMX RNA binding motif protein, X-linked
RNF2 ring finger protein 2
RNF5 ring finger protein 5, E3 ubiquitin protein ligase
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2
SAFB2 scaffold attachment factor B2
SAMD1 sterile alpha motif domain containing 1
SIM2 single-minded family bHLH transcription factor 2
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
SRSF10 serine/arginine-rich splicing factor 10
SRSF7 serine/arginine-rich splicing factor 7
TFAP2D transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
TOP2B topoisomerase (DNA) II beta 180kDa
TRA2A transformer 2 alpha homolog (Drosophila)
TRA2B transformer 2 beta homolog (Drosophila)
TTN titin
TYSND1 trypsin domain containing 1
UBAC1 UBA domain containing 1
VGF VGF nerve growth factor inducible
VPS37C vacuolar protein sorting 37 homolog C (S. cerevisiae)
WAC WW domain containing adaptor with coiled-coil
WDR33 WD repeat domain 33
WIZ widely interspaced zinc finger motifs
ZC3H11A zinc finger CCCH-type containing 11A
ZMAT2 zinc finger, matrin-type 2
ZNF638 zinc finger protein 638

Symbol Name
AAMP angio-associated, migratory cell protein
AK2 adenylate kinase 2
AMACR alpha-methylacyl-CoA racemase
BAG3 BCL2-associated athanogene 3
BCL10 B-cell CLL/lymphoma 10
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BSDC1 BSD domain containing 1
C1ORF109 chromosome 1 open reading frame 109
CAB39L calcium binding protein 39-like
CAV1 caveolin 1, caveolae protein, 22kDa
CD22 CD22 molecule
CD2BP2 CD2 (cytoplasmic tail) binding protein 2
CHMP1A charged multivesicular body protein 1A
CHTF18 CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
COBL cordon-bleu WH2 repeat protein
COG4 component of oligomeric golgi complex 4
CPNE2 copine II
CSNK2A1 casein kinase 2, alpha 1 polypeptide
CSPG4 chondroitin sulfate proteoglycan 4
DCAF8 DDB1 and CUL4 associated factor 8
DDHD2 DDHD domain containing 2
DNAAF5 dynein, axonemal, assembly factor 5
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5
DUSP3 dual specificity phosphatase 3
EIF2B1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa
EVL Enah/Vasp-like
EYA3 EYA transcriptional coactivator and phosphatase 3
FERMT3 fermitin family member 3
FUCA2 fucosidase, alpha-L- 2, plasma
FXYD3 FXYD domain containing ion transport regulator 3
GALE UDP-galactose-4-epimerase
GAS7 growth arrest-specific 7
GOLGA1 golgin A1
HDHD2 haloacid dehalogenase-like hydrolase domain containing 2
HERPUD2 HERPUD family member 2
HSP90AB4P heat shock protein 90kDa alpha (cytosolic), class B member 4, pseudogene
IL6ST interleukin 6 signal transducer
MAEA macrophage erythroblast attacher
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4
MAP7D3 MAP7 domain containing 3
MCAT malonyl CoA:ACP acyltransferase (mitochondrial)
MCRIP2 MAPK regulated corepressor interacting protein 2
MED13 mediator complex subunit 13
METTL1 methyltransferase like 1
MPLKIP M-phase specific PLK1 interacting protein
MVD mevalonate (diphospho) decarboxylase
NKPD1 NTPase, KAP family P-loop domain containing 1
NMD3 NMD3 ribosome export adaptor
NR2C2AP nuclear receptor 2C2-associated protein
NUB1 negative regulator of ubiquitin-like proteins 1
NUBP1 nucleotide binding protein 1
OTUD6B OTU domain containing 6B
PBDC1 polysaccharide biosynthesis domain containing 1
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B
PMM2 phosphomannomutase 2
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit
PPCS phosphopantothenoylcysteine synthetase
PRMT3 protein arginine methyltransferase 3
PRPF18 pre-mRNA processing factor 18
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
RAB30 RAB30, member RAS oncogene family
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2
RFC2 replication factor C (activator 1) 2, 40kDa
RNF113A ring finger protein 113A
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1
S100P S100 calcium binding protein P
SDK1 sidekick cell adhesion molecule 1
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
SHC1 SHC (Src homology 2 domain containing) transforming protein 1
SLC16A7 solute carrier family 16 (monocarboxylate transporter), member 7
SLC39A11 solute carrier family 39, member 11
SNX17 sorting nexin 17
SNX24 sorting nexin 24
SRP54 signal recognition particle 54kDa
SSH3 slingshot protein phosphatase 3
TIMM22 translocase of inner mitochondrial membrane 22 homolog (yeast)
TJP3 tight junction protein 3
TMEM40 transmembrane protein 40
TRAFD1 TRAF-type zinc finger domain containing 1
TRIM32 tripartite motif containing 32
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1
TSEN34 TSEN34 tRNA splicing endonuclease subunit
TTC7A tetratricopeptide repeat domain 7A
TTC9C tetratricopeptide repeat domain 9C
TXNDC9 thioredoxin domain containing 9
UBE2H ubiquitin-conjugating enzyme E2H
UBE2Z ubiquitin-conjugating enzyme E2Z
UBE3C ubiquitin protein ligase E3C
URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
USP15 ubiquitin specific peptidase 15
VWA8 von Willebrand factor A domain containing 8
WDFY1 WD repeat and FYVE domain containing 1
WDR47 WD repeat domain 47
WIPF2 WAS/WASL interacting protein family, member 2
ZBED1 zinc finger, BED-type containing 1
ZKSCAN2 zinc finger with KRAB and SCAN domains 2
ZNF671 zinc finger protein 671