NCI-H1563 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Non-Small Cell Lung Carcinoma Tumour (Cell Model Passports, SIDM00751)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00751
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Genes

199 proteins associated with the cell line NCI-H1563 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ACADSB acyl-CoA dehydrogenase, short/branched chain
ACO2 aconitase 2, mitochondrial
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1
ALB albumin
ANTXR1 anthrax toxin receptor 1
AUH AU RNA binding protein/enoyl-CoA hydratase
CFDP1 craniofacial development protein 1
CHD6 chromodomain helicase DNA binding protein 6
CNOT3 CCR4-NOT transcription complex, subunit 3
COA3 cytochrome c oxidase assembly factor 3
COQ9 coenzyme Q9
COX5A cytochrome c oxidase subunit Va
CYC1 cytochrome c-1
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial
ECHDC2 enoyl CoA hydratase domain containing 2
EDN3 endothelin 3
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
ENGASE endo-beta-N-acetylglucosaminidase
EPDR1 ependymin related 1
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
ERAL1 Era-like 12S mitochondrial rRNA chaperone 1
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
ETFDH electron-transferring-flavoprotein dehydrogenase
FAM193B family with sequence similarity 193, member B
FASTKD5 FAST kinase domains 5
FDFT1 farnesyl-diphosphate farnesyltransferase 1
GALNT1 polypeptide N-acetylgalactosaminyltransferase 1
GIPC1 GIPC PDZ domain containing family, member 1
GPC6 glypican 6
GRIPAP1 GRIP1 associated protein 1
HIGD2A HIG1 hypoxia inducible domain family, member 2A
HOXA10 homeobox A10
HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4
HSPG2 heparan sulfate proteoglycan 2
IDH3A isocitrate dehydrogenase 3 (NAD+) alpha
IDH3B isocitrate dehydrogenase 3 (NAD+) beta
IGHVII-60-1 immunoglobulin heavy variable (II)-60-1 (pseudogene)
ITPRIP inositol 1,4,5-trisphosphate receptor interacting protein
KLC4 kinesin light chain 4
L1RE1 LINE1 retrotransposable element 1
LAMB2 laminin, beta 2 (laminin S)
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LOC100129636 uncharacterized LOC100129636
LOC102724978 atherin-like
LOC105373349 uncharacterized LOC105373349
LOC105374084 uncharacterized LOC105374084
LOC105377427 uncharacterized LOC105377427
LOC440792 proline dehydrogenase (oxidase) 1 pseudogene
MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta)
MFF mitochondrial fission factor
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae)
MRPL34 mitochondrial ribosomal protein L34
MRPL45 mitochondrial ribosomal protein L45
MRPS2 mitochondrial ribosomal protein S2
MRPS34 mitochondrial ribosomal protein S34
NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit
NCLP2 nucleolin pseudogene 2
NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
NDUFA4 NDUFA4, mitochondrial complex associated
NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa
NDUFAF5 NADH dehydrogenase (ubiquinone) complex I, assembly factor 5
NDUFB10 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa
NDUFB11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa
NDUFB5 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
NDUFB6 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa
NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa
NUP42 nucleoporin 42
OR52N2 olfactory receptor, family 52, subfamily N, member 2
OXA1L oxidase (cytochrome c) assembly 1-like
PARN poly(A)-specific ribonuclease
PAXIP1 PAX interacting (with transcription-activation domain) protein 1
PC pyruvate carboxylase
PCCA propionyl CoA carboxylase, alpha polypeptide
PCCB propionyl CoA carboxylase, beta polypeptide
PLCB3 phospholipase C, beta 3 (phosphatidylinositol-specific)
PLCG1 phospholipase C, gamma 1
POLDIP2 polymerase (DNA-directed), delta interacting protein 2
PPP1R10 protein phosphatase 1, regulatory subunit 10
PPP6R3 protein phosphatase 6, regulatory subunit 3
RAB11FIP1 RAB11 family interacting protein 1 (class I)
RDH10 retinol dehydrogenase 10 (all-trans)
RDH13 retinol dehydrogenase 13 (all-trans/9-cis)
RPRD2 regulation of nuclear pre-mRNA domain containing 2
RRM2 ribonucleotide reductase M2
SCO2 SCO2 cytochrome c oxidase assembly protein
SFXN1 sideroflexin 1
SLC25A12 solute carrier family 25 (aspartate/glutamate carrier), member 12
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6
SMC6 structural maintenance of chromosomes 6
STAM2 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
STXBP5 syntaxin binding protein 5 (tomosyn)
SURF1 surfeit 1
TACO1 translational activator of mitochondrially encoded cytochrome c oxidase I
UQCR10 ubiquinol-cytochrome c reductase, complex III subunit X
UQCRC1 ubiquinol-cytochrome c reductase core protein I
UQCRC2 ubiquinol-cytochrome c reductase core protein II
ZNF229 zinc finger protein 229

Symbol Name
ACAT2 acetyl-CoA acetyltransferase 2
ACTR5 ARP5 actin-related protein 5 homolog (yeast)
ANAPC16 anaphase promoting complex subunit 16
ARHGAP1 Rho GTPase activating protein 1
B4GAT1 beta-1,4-glucuronyltransferase 1
BANF1 barrier to autointegration factor 1
BCAS2 breast carcinoma amplified sequence 2
BCLAF1 BCL2-associated transcription factor 1
C11ORF98 chromosome 11 open reading frame 98
CARHSP1 calcium regulated heat stable protein 1, 24kDa
CCT6B chaperonin containing TCP1, subunit 6B (zeta 2)
CDC42 cell division cycle 42
CFL1 cofilin 1 (non-muscle)
CHD4 chromodomain helicase DNA binding protein 4
CKAP5 cytoskeleton associated protein 5
CNOT10 CCR4-NOT transcription complex, subunit 10
CROCC ciliary rootlet coiled-coil, rootletin
CWF19L1 CWF19-like 1, cell cycle control (S. pombe)
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)
DEK DEK proto-oncogene
DENR density-regulated protein
DPY30 dpy-30 homolog (C. elegans)
DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha)
EFCAB5 EF-hand calcium binding domain 5
EMID1 EMI domain containing 1
EXOSC1 exosome component 1
EXOSC6 exosome component 6
EXOSC8 exosome component 8
EXOSC9 exosome component 9
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
FEN1 flap structure-specific endonuclease 1
FILIP1L filamin A interacting protein 1-like
FUS FUS RNA binding protein
GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase)
GLRX3 glutaredoxin 3
GTF2B general transcription factor IIB
HDAC2 histone deacetylase 2
HMGB1 high mobility group box 1
HSPA14 heat shock 70kDa protein 14
LOC100507393 putative uncharacterized protein FLJ44672-like
LOC101928572 uncharacterized LOC101928572
LOC101929355 uncharacterized protein C17orf105-like
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
M6PR mannose-6-phosphate receptor (cation dependent)
MORF4L1 mortality factor 4 like 1
MRGBP MRG/MORF4L binding protein
MSH6 mutS homolog 6
MTA2 metastasis associated 1 family, member 2
NANS N-acetylneuraminic acid synthase
NPM3 nucleophosmin/nucleoplasmin 3
NUDC nudC nuclear distribution protein
PA2G4 proliferation-associated 2G4, 38kDa
PACSIN3 protein kinase C and casein kinase substrate in neurons 3
PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase
PFDN6 prefoldin subunit 6
PMF1 polyamine-modulated factor 1
PNISR PNN-interacting serine/arginine-rich protein
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme
PRC1 protein regulator of cytokinesis 1
PRMT1 protein arginine methyltransferase 1
PRPF6 pre-mRNA processing factor 6
RAN RAN, member RAS oncogene family
RANGAP1 Ran GTPase activating protein 1
RBM25 RNA binding motif protein 25
RBM28 RNA binding motif protein 28
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RFC4 replication factor C (activator 1) 4, 37kDa
RIC8A RIC8 guanine nucleotide exchange factor A
RPL38 ribosomal protein L38
RPLP2 ribosomal protein, large, P2
RRP36 ribosomal RNA processing 36 homolog (S. cerevisiae)
RUVBL1 RuvB-like AAA ATPase 1
SART1 squamous cell carcinoma antigen recognized by T cells
SART3 squamous cell carcinoma antigen recognized by T cells 3
SCAF4 SR-related CTD-associated factor 4
SF3B2 splicing factor 3b, subunit 2, 145kDa
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SNIP1 Smad nuclear interacting protein 1
SNRPA1 small nuclear ribonucleoprotein polypeptide A'
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa
SNX5 sorting nexin 5
SRRM1 serine/arginine repetitive matrix 1
SRRT serrate, RNA effector molecule
TMEM68 transmembrane protein 68
TMPO thymopoietin
TPR translocated promoter region, nuclear basket protein
TRIM26 tripartite motif containing 26
UBAP2L ubiquitin associated protein 2-like
UBE2N ubiquitin-conjugating enzyme E2N
UFM1 ubiquitin-fold modifier 1
UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast)
WBP11 WW domain binding protein 11
WDR5 WD repeat domain 5
WDR82 WD repeat domain 82
WTAP Wilms tumor 1 associated protein