NCI-H1688 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Small Cell Lung Carcinoma Metastasis (Cell Model Passports, SIDM00792)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00792
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Genes

197 proteins associated with the cell line NCI-H1688 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACADM acyl-CoA dehydrogenase, C-4 to C-12 straight chain
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain
ACADSB acyl-CoA dehydrogenase, short/branched chain
ADAR adenosine deaminase, RNA-specific
AFG3L2 AFG3-like AAA ATPase 2
ALDH1A2 aldehyde dehydrogenase 1 family, member A2
ALDH1B1 aldehyde dehydrogenase 1 family, member B1
AMACR alpha-methylacyl-CoA racemase
AUH AU RNA binding protein/enoyl-CoA hydratase
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
BPHL biphenyl hydrolase-like (serine hydrolase)
C1ORF50 chromosome 1 open reading frame 50
CBR4 carbonyl reductase 4
CBX8 chromobox homolog 8
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
CHDH choline dehydrogenase
CISD1 CDGSH iron sulfur domain 1
CPT2 carnitine palmitoyltransferase 2
DBT dihydrolipoamide branched chain transacylase E2
DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
DHRS2 dehydrogenase/reductase (SDR family) member 2
DIABLO diablo, IAP-binding mitochondrial protein
DLST dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
DNAH11 dynein, axonemal, heavy chain 11
EFNA1 ephrin-A1
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)
ETFDH electron-transferring-flavoprotein dehydrogenase
EXD2 exonuclease 3'-5' domain containing 2
FABP5P11 fatty acid binding protein 5 pseudogene 11
FASTKD5 FAST kinase domains 5
FECH ferrochelatase
GAR1 GAR1 ribonucleoprotein
GCG glucagon
GDAP1 ganglioside induced differentiation associated protein 1
GLYCTK glycerate kinase
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis)
HIBCH 3-hydroxyisobutyryl-CoA hydrolase
HMGCL 3-hydroxymethyl-3-methylglutaryl-CoA lyase
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9)
HNRNPR heterogeneous nuclear ribonucleoprotein R
HP1BP3 heterochromatin protein 1, binding protein 3
HSD17B8 hydroxysteroid (17-beta) dehydrogenase 8
HSPD1 heat shock 60kDa protein 1 (chaperonin)
HSPE1 heat shock 10kDa protein 1
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IDH3B isocitrate dehydrogenase 3 (NAD+) beta
IMPA2 inositol(myo)-1(or 4)-monophosphatase 2
LEMD3 LEM domain containing 3
LOC105374084 uncharacterized LOC105374084
MATR3 matrin 3
MESTP4 mesoderm specific transcript pseudogene 4
MRPS31 mitochondrial ribosomal protein S31
MTFR1L mitochondrial fission regulator 1-like
NHLRC3 NHL repeat containing 3
NIT1 nitrilase 1
NNT nicotinamide nucleotide transhydrogenase
NOS3 nitric oxide synthase 3 (endothelial cell)
NYX nyctalopin
OR52N2 olfactory receptor, family 52, subfamily N, member 2
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial)
PDHX pyruvate dehydrogenase complex, component X
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2
PGAM5 phosphoglycerate mutase family member 5
PHC2 polyhomeotic homolog 2 (Drosophila)
POGZ pogo transposable element with ZNF domain
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit
POSTN periostin, osteoblast specific factor
PPOX protoporphyrinogen oxidase
PRDX3 peroxiredoxin 3
PTBP2 polypyrimidine tract binding protein 2
RABGAP1 RAB GTPase activating protein 1
RBM12B RNA binding motif protein 12B
RBM15 RNA binding motif protein 15
RBMX RNA binding motif protein, X-linked
RBMXL1 RNA binding motif protein, X-linked-like 1
RING1 ring finger protein 1
SAFB2 scaffold attachment factor B2
SCARB2 scavenger receptor class B, member 2
SDR39U1 short chain dehydrogenase/reductase family 39U, member 1
SFPQ splicing factor proline/glutamine-rich
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial)
SNX33 sorting nexin 33
SPRYD4 SPRY domain containing 4
SRXN1 sulfiredoxin 1
SYNE1 spectrin repeat containing, nuclear envelope 1
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative)
TDRKH tudor and KH domain containing
TFAM transcription factor A, mitochondrial
UBTF upstream binding transcription factor, RNA polymerase I
UGDH UDP-glucose 6-dehydrogenase
VEZF1 vascular endothelial zinc finger 1
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae)
VWA8 von Willebrand factor A domain containing 8
ZMYND8 zinc finger, MYND-type containing 8
ZNF687 zinc finger protein 687

Symbol Name
ADSL adenylosuccinate lyase
ALDH18A1 aldehyde dehydrogenase 18 family, member A1
ANKHD1 ankyrin repeat and KH domain containing 1
ANO10 anoctamin 10
ARF6 ADP-ribosylation factor 6
ATG3 autophagy related 3
ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2
ATXN2 ataxin 2
BSG basigin (Ok blood group)
BZW1 basic leucine zipper and W2 domains 1
C17ORF80 chromosome 17 open reading frame 80
C19ORF53 chromosome 19 open reading frame 53
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1
CAPZB capping protein (actin filament) muscle Z-line, beta
CFAP70 cilia and flagella associated protein 70
CKAP5 cytoskeleton associated protein 5
COG5 component of oligomeric golgi complex 5
COMMD3 COMM domain containing 3
COPS7A COP9 signalosome subunit 7A
CPNE1 copine I
CRYBG1 crystallin beta-gamma domain containing 1
CTPS1 CTP synthase 1
CUL4A cullin 4A
CUX1 cut-like homeobox 1
CWF19L1 CWF19-like 1, cell cycle control (S. pombe)
CWF19L2 CWF19-like 2, cell cycle control (S. pombe)
DCTN1 dynactin 1
DNAJC17 DnaJ (Hsp40) homolog, subfamily C, member 17
EEF1A2 eukaryotic translation elongation factor 1 alpha 2
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
EIF2B3 eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
EIF3H eukaryotic translation initiation factor 3, subunit H
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3
EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1
EVC2 Ellis van Creveld syndrome 2
EXOSC8 exosome component 8
FLNA filamin A, alpha
GRWD1 glutamate-rich WD repeat containing 1
GTPBP1 GTP binding protein 1
IPO4 importin 4
IPO5 importin 5
KHSRP KH-type splicing regulatory protein
LARP1 La ribonucleoprotein domain family, member 1
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2
MOB4 MOB family member 4, phocein
NAA10 N(alpha)-acetyltransferase 10, NatA catalytic subunit
NCAPD2 non-SMC condensin I complex, subunit D2
NSDHL NAD(P) dependent steroid dehydrogenase-like
P3H1 prolyl 3-hydroxylase 1
PEF1 penta-EF-hand domain containing 1
PEX5 peroxisomal biogenesis factor 5
PFAS phosphoribosylformylglycinamidine synthase
PNKP polynucleotide kinase 3'-phosphatase
POFUT1 protein O-fucosyltransferase 1
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform
PRDM15 PR domain containing 15
PRRC1 proline-rich coiled-coil 1
RAB21 RAB21, member RAS oncogene family
RAB8A RAB8A, member RAS oncogene family
REPS1 RALBP1 associated Eps domain containing 1
RPAP3 RNA polymerase II associated protein 3
RPGRIP1L RPGRIP1-like
RPL10 ribosomal protein L10
RPL10A ribosomal protein L10a
RPL12 ribosomal protein L12
RPL19 ribosomal protein L19
RPL23A ribosomal protein L23a
RPL27A ribosomal protein L27a
RPL31 ribosomal protein L31
RPL6 ribosomal protein L6
RPL7 ribosomal protein L7
RPL9 ribosomal protein L9
RPP38 ribonuclease P/MRP 38kDa subunit
RPS13 ribosomal protein S13
RPS26 ribosomal protein S26
RPS3 ribosomal protein S3
RPS7 ribosomal protein S7
SEPHS1P7 selenophosphate synthetase 1 pseudogene 7
SETMAR SET domain and mariner transposase fusion gene
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2
SMC4 structural maintenance of chromosomes 4
SMG9 SMG9 nonsense mediated mRNA decay factor
STAMBP STAM binding protein
TBC1D13 TBC1 domain family, member 13
TMEM109 transmembrane protein 109
TP53RK TP53 regulating kinase
TRAPPC6B trafficking protein particle complex 6B
TRIM56 tripartite motif containing 56
TRMT1 tRNA methyltransferase 1 homolog (S. cerevisiae)
VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae)
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae)
YBX1 Y box binding protein 1
YKT6 YKT6 v-SNARE homolog (S. cerevisiae)
YTHDF2 YTH N(6)-methyladenosine RNA binding protein 2
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta