NCI-H630 Gene Set
Genes
22 genes with high or low copy number in NCI-H630 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
high copy number
| Symbol |
Name |
Standardized Value |
|
WDR66
|
WD repeat domain 66
|
3.12177
|
|
LINC00934
|
long intergenic non-protein coding RNA 934
|
2.93899
|
|
TMEM233
|
transmembrane protein 233
|
2.93899
|
|
CCDC60
|
coiled-coil domain containing 60
|
2.93899
|
|
MGAT4C
|
MGAT4 family, member C
|
2.93899
|
|
SCN8A
|
sodium channel, voltage gated, type VIII alpha subunit
|
2.93899
|
|
CAND1
|
cullin-associated and neddylation-dissociated 1
|
2.49065
|
|
LOH12CR1
|
loss of heterozygosity, 12, chromosomal region 1
|
2.44392
|
|
CREBL2
|
cAMP responsive element binding protein-like 2
|
2.10177
|
|
GPR19
|
G protein-coupled receptor 19
|
2.10038
|
|
DUSP16
|
dual specificity phosphatase 16
|
2.09431
|
|
DNM1L
|
dynamin 1-like
|
2.06626
|
|
YARS2
|
tyrosyl-tRNA synthetase 2, mitochondrial
|
2.06473
|
|
LRMP
|
lymphoid-restricted membrane protein
|
2.05242
|
|
CASC1
|
cancer susceptibility candidate 1
|
2.0521
|
|
LYRM5
|
LYR motif containing 5
|
2.0521
|
|
KRAS
|
Kirsten rat sarcoma viral oncogene homolog
|
2.05093
|
low copy number
| Symbol |
Name |
Standardized Value |
|
BRCA1
|
breast cancer 1, early onset
|
-3.24687
|
|
MACROD2-AS1
|
MACROD2 antisense RNA 1
|
-2.81384
|
|
HDHD1
|
haloacid dehalogenase-like hydrolase domain containing 1
|
-2.80688
|
|
OR2T11
|
olfactory receptor, family 2, subfamily T, member 11 (gene/pseudogene)
|
-2.78432
|
|
OR2T10
|
olfactory receptor, family 2, subfamily T, member 10
|
-2.78237
|
