NCI-H69 Gene Set
Genes
37 genes with high or low copy number in NCI-H69 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
high copy number
| Symbol |
Name |
Standardized Value |
|
ASB3
|
ankyrin repeat and SOCS box containing 3
|
3.12177
|
|
MYCN
|
v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
|
2.18124
|
|
MYCNOS
|
MYCN opposite strand
|
2.18124
|
|
FGD4
|
FYVE, RhoGEF and PH domain containing 4
|
2.07338
|
|
KIAA1551
|
KIAA1551
|
2.06989
|
|
H3F3C
|
H3 histone, family 3C
|
2.06989
|
|
RNU6-78P
|
RNA, U6 small nuclear 78, pseudogene
|
2.06989
|
|
METTL20
|
methyltransferase like 20
|
2.06626
|
|
AMN1
|
antagonist of mitotic exit network 1 homolog (S. cerevisiae)
|
2.06626
|
|
DENND5B-AS1
|
DENND5B antisense RNA 1
|
2.06626
|
|
DDX11
|
DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
|
2.06473
|
|
BICD1
|
bicaudal D homolog 1 (Drosophila)
|
2.06473
|
|
TSPAN11
|
tetraspanin 11
|
2.06473
|
|
DENND5B
|
DENN/MADD domain containing 5B
|
2.06473
|
|
DDX11-AS1
|
DDX11 antisense RNA 1
|
2.06473
|
|
FAM60A
|
family with sequence similarity 60, member A
|
2.06316
|
|
LINC00941
|
long intergenic non-protein coding RNA 941
|
2.06316
|
|
OVOS2
|
ovostatin 2
|
2.06316
|
|
FLJ13224
|
uncharacterized LOC79857
|
2.06316
|
|
SNORA75
|
small nucleolar RNA, H/ACA box 75
|
2.06233
|
|
IPO8
|
importin 8
|
2.0622
|
|
CAPRIN2
|
caprin family member 2
|
2.0622
|
low copy number
| Symbol |
Name |
Standardized Value |
|
ZNF503
|
zinc finger protein 503
|
-3.38669
|
|
ZNF503-AS2
|
ZNF503 antisense RNA 2
|
-3.38669
|
|
MIR4799
|
microRNA 4799
|
-3.2703
|
|
SCN2A
|
sodium channel, voltage gated, type II alpha subunit
|
-3.12964
|
|
SNORA70F
|
small nucleolar RNA, H/ACA box 70F
|
-3.12964
|
|
SCN3A
|
sodium channel, voltage gated, type III alpha subunit
|
-3.12964
|
|
GRB14
|
growth factor receptor-bound protein 14
|
-3.12964
|
|
CSRNP3
|
cysteine-serine-rich nuclear protein 3
|
-3.11641
|
|
LOC100272216
|
uncharacterized LOC100272216
|
-3.11641
|
|
GTF2H2C
|
GTF2H2 family member C
|
-3.11641
|
|
GALNT3
|
polypeptide N-acetylgalactosaminyltransferase 3
|
-3.11641
|
|
GUSBP3
|
glucuronidase, beta pseudogene 3
|
-3.11641
|
|
SLC38A11
|
solute carrier family 38, member 11
|
-3.05881
|
|
COBLL1
|
cordon-bleu WH2 repeat protein-like 1
|
-3.05881
|
|
WWOX
|
WW domain containing oxidoreductase
|
-2.94448
|
