NG25_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NG25 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NG25_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.110872
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0716859
BIRC3 baculoviral IAP repeat containing 3 0.0426681
PDE4D phosphodiesterase 4D, cAMP-specific 0.0338838
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0311393
TXNRD1 thioredoxin reductase 1 0.0307941
PCBP2 poly(rC) binding protein 2 0.0299604
YAP1 Yes-associated protein 1 0.0293697
ERRFI1 ERBB receptor feedback inhibitor 1 0.0292782
RRM2 ribonucleotide reductase M2 0.025268
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0250571
IPO7 importin 7 0.0217948
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0212367
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0193807
WWOX WW domain containing oxidoreductase 0.0192735
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0169801
GJA1 gap junction protein, alpha 1, 43kDa 0.016945
EDN1 endothelin 1 0.0156189
HMGA2 high mobility group AT-hook 2 0.0152498
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0150933
PDE4B phosphodiesterase 4B, cAMP-specific 0.0146177
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0143999
RPL3 ribosomal protein L3 0.0140238
DENND5A DENN/MADD domain containing 5A 0.0134077
ZSWIM6 zinc finger, SWIM-type containing 6 0.0133306
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0131667
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0129855
FBXL17 F-box and leucine-rich repeat protein 17 0.0129013
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0123231
INTS6 integrator complex subunit 6 0.0122449
USP9X ubiquitin specific peptidase 9, X-linked 0.0121198
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0115278
SQSTM1 sequestosome 1 0.0115196
MARCHF4 membrane associated ring-CH-type finger 4 0.0115181
TPM3 tropomyosin 3 0.0114535
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0114395
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0113756
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0113112
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0106654
NALF1 NALCN channel auxiliary factor 1 0.0103874
NFE2L2 nuclear factor, erythroid 2-like 2 0.0103476
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0100764
RPS18 ribosomal protein S18 0.00991592
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.00991021
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.00973534
MTAP methylthioadenosine phosphorylase 0.00972936
ABI2 abl-interactor 2 0.00969364
ARRDC3 arrestin domain containing 3 0.00950105
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.00938737
SACS sacsin molecular chaperone 0.00938299
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.00921074
HELLS helicase, lymphoid-specific 0.00914075
LPP LIM domain containing preferred translocation partner in lipoma 0.00913313
CD164 CD164 molecule, sialomucin 0.00904802
MSH6 mutS homolog 6 0.00900858
ASPH aspartate beta-hydroxylase 0.00858872
RAD51B RAD51 paralog B 0.00858045
ZBTB20 zinc finger and BTB domain containing 20 0.00842831
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 0.00834117
GMDS GDP-mannose 4,6-dehydratase 0.0082591
NSD3 nuclear receptor binding SET domain protein 3 0.00811134
SPIRE1 spire-type actin nucleation factor 1 0.00806443
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.00806153
MYH9 myosin, heavy chain 9, non-muscle 0.00799022
ETNK1 ethanolamine kinase 1 0.00792141
APTX aprataxin 0.00790702
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.00789776
UBC ubiquitin C 0.00789199
MCL1 myeloid cell leukemia 1 0.00786263
SDK1 sidekick cell adhesion molecule 1 0.00774662
CSMD1 CUB and Sushi multiple domains 1 0.00764549
MACROH2A1 macroH2A.1 histone 0.00753269
ICAM1 intercellular adhesion molecule 1 0.00750796
RBBP7 retinoblastoma binding protein 7 0.00745118
PAX6 paired box 6 0.00744486
MAT2A methionine adenosyltransferase II, alpha 0.0074122
SRSF1 serine/arginine-rich splicing factor 1 0.00740681
EIF1 eukaryotic translation initiation factor 1 0.00730586
NCEH1 neutral cholesterol ester hydrolase 1 0.00725895
ALMS1 Alstrom syndrome protein 1 0.00722698
QSER1 glutamine and serine rich 1 0.00715826
FHIT fragile histidine triad 0.00714613
SENP5 SUMO1/sentrin specific peptidase 5 0.00711573
ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 0.00711352
NR1D2 nuclear receptor subfamily 1, group D, member 2 0.00709579
EIF4A2 eukaryotic translation initiation factor 4A2 0.00702171
FBXL7 F-box and leucine-rich repeat protein 7 0.00691459
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.00689348
TM9SF3 transmembrane 9 superfamily member 3 0.00689236
FANCI Fanconi anemia, complementation group I 0.00686397
CCNL1 cyclin L1 0.00684213
CLPTM1L CLPTM1-like 0.00683315
UHMK1 U2AF homology motif (UHM) kinase 1 0.00681818
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein 0.00679521
CCDC200 coiled-coil domain containing 200 0.00679162
HOMER1 homer scaffolding protein 1 0.00675632
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.00672995
HELB helicase (DNA) B 0.00670747
SMAP1 small ArfGAP 1 0.00669744
DIAPH3 diaphanous-related formin 3 0.00660105

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.17387
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.12694
NLGN1 neuroligin 1 -0.0892158
TMSB10 thymosin beta 10 -0.0823616
FTL ferritin, light polypeptide -0.0685907
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.067434
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0604923
PTMA prothymosin, alpha -0.0573117
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0550573
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0509362
RPL35A ribosomal protein L35a -0.0468523
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0439335
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0429012
VIM vimentin -0.0427888
MMP12 matrix metallopeptidase 12 -0.0424239
RPS3 ribosomal protein S3 -0.0411014
ACTG1 actin gamma 1 -0.0401337
HSPB1 heat shock 27kDa protein 1 -0.0393004
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0380368
ZNF804A zinc finger protein 804A -0.0374021
RPL37A ribosomal protein L37a -0.0373999
DPYD dihydropyrimidine dehydrogenase -0.0370611
CENPF centromere protein F, 350/400kDa -0.0369471
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0368607
SLC38A2 solute carrier family 38, member 2 -0.0360481
RPS8 ribosomal protein S8 -0.0349011
RPL23 ribosomal protein L23 -0.0330384
KPNB1 karyopherin (importin) beta 1 -0.0328834
RPL26 ribosomal protein L26 -0.0328212
MGAT4C MGAT4 family, member C -0.0325017
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0318563
RPS12 ribosomal protein S12 -0.0307721
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0305045
RPS6 ribosomal protein S6 -0.0296545
PFN1 profilin 1 -0.0287633
ANXA1 annexin A1 -0.0285377
DST dystonin -0.0274805
ATP5F1B ATP synthase F1 subunit beta -0.0267913
NAP1L1 nucleosome assembly protein 1-like 1 -0.026597
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0263684
RPS27A ribosomal protein S27a -0.0263154
BCHE butyrylcholinesterase -0.0262119
CDK6 cyclin-dependent kinase 6 -0.0257085
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0256125
CALR calreticulin -0.0255561
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0254644
MYL12B myosin, light chain 12B, regulatory -0.0251362
SNCA synuclein, alpha (non A4 component of amyloid precursor) -0.0250388
SYT1 synaptotagmin I -0.0245305
RPLP1 ribosomal protein, large, P1 -0.0240711
TPT1 tumor protein, translationally-controlled 1 -0.0238709
RPL11 ribosomal protein L11 -0.0238457
RPL8 ribosomal protein L8 -0.0234927
EHBP1 EH domain binding protein 1 -0.0234623
RPL19 ribosomal protein L19 -0.023226
LDHB lactate dehydrogenase B -0.0228996
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0226186
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0225437
RAB7A RAB7A, member RAS oncogene family -0.0223258
RASAL2 RAS protein activator like 2 -0.0220761
DLC1 DLC1 Rho GTPase activating protein -0.0219653
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0219356
CANX calnexin -0.0217175
S100A6 S100 calcium binding protein A6 -0.021551
PTMS parathymosin -0.0211157
EGR1 early growth response 1 -0.0206753
TPI1 triosephosphate isomerase 1 -0.0206377
KDM2A lysine (K)-specific demethylase 2A -0.0206368
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.020179
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0201461
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 -0.0201262
LARP1 La ribonucleoprotein domain family, member 1 -0.0200477
PDIA3 protein disulfide isomerase family A, member 3 -0.0198082
FSTL5 follistatin-like 5 -0.0197879
ANKRD12 ankyrin repeat domain 12 -0.0196034
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0193724
RPL34 ribosomal protein L34 -0.0193018
RAB1A RAB1A, member RAS oncogene family -0.0192323
RPS21 ribosomal protein S21 -0.0191874
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0189312
RPS29 ribosomal protein S29 -0.0188545
RPS14 ribosomal protein S14 -0.0187564
RPLP2 ribosomal protein, large, P2 -0.018458
RPL37 ribosomal protein L37 -0.0184529
PRRC2C proline-rich coiled-coil 2C -0.0182646
FBXO11 F-box protein 11 -0.0182403
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0182299
CELF2 CUGBP, Elav-like family member 2 -0.0181157
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0180198
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0180127
LMO7 LIM domain 7 -0.0180065
RHOA ras homolog family member A -0.0176415
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0174028
HDGF hepatoma-derived growth factor -0.0173139
GOLGA4 golgin A4 -0.0171378
RPS13 ribosomal protein S13 -0.0170364
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0168658
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0168393
HSPE1 heat shock 10kDa protein 1 -0.0167677
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0165716