NG25_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NG25 perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NG25_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.357254
AKAP12 A kinase (PRKA) anchor protein 12 0.116397
PCBP2 poly(rC) binding protein 2 0.0830612
EEF2 eukaryotic translation elongation factor 2 0.0807033
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0695367
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0562684
DPH6 diphthamine biosynthesis 6 0.048921
MAP1B microtubule-associated protein 1B 0.0485193
MCL1 myeloid cell leukemia 1 0.0454253
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0436037
SLITRK6 SLIT and NTRK-like family, member 6 0.0423241
DST dystonin 0.0401598
RPL23 ribosomal protein L23 0.0387114
TRIO trio Rho guanine nucleotide exchange factor 0.0386524
TLE4 transducin-like enhancer of split 4 0.0372737
MEF2A myocyte enhancer factor 2A 0.0366159
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0346007
FNDC3B fibronectin type III domain containing 3B 0.0335597
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0334776
COL4A1 collagen, type IV, alpha 1 0.0329544
ARHGAP9 Rho GTPase activating protein 9 0.0325343
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.0318236
VEGFA vascular endothelial growth factor A 0.0312531
RPL3 ribosomal protein L3 0.0311202
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0308658
KTN1 kinectin 1 (kinesin receptor) 0.029444
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0293586
RUNX1 runt-related transcription factor 1 0.0292412
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0285785
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0283524
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0281743
ITPRID2 ITPR interacting domain containing 2 0.0279489
DNMBP dynamin binding protein 0.02779
CD46 CD46 molecule, complement regulatory protein 0.0276091
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.027266
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0268589
LPIN1 lipin 1 0.0267799
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0265793
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0256028
ZSWIM6 zinc finger, SWIM-type containing 6 0.0255076
MMP2 matrix metallopeptidase 2 0.0253734
NPAS2 neuronal PAS domain protein 2 0.0247113
PLPP1 phospholipid phosphatase 1 0.0240907
PTPRE protein tyrosine phosphatase, receptor type, E 0.0239854
PLAT plasminogen activator, tissue 0.0236721
RPS18 ribosomal protein S18 0.0230213
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0228399
SEPTIN9 septin 9 0.0227277
DGKH diacylglycerol kinase, eta 0.0223859
MYH9 myosin, heavy chain 9, non-muscle 0.0216494
APP amyloid beta (A4) precursor protein 0.0215355
ANTXR1 anthrax toxin receptor 1 0.0213653
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0212787
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0212098
PRRC2B proline-rich coiled-coil 2B 0.0211869
RET ret proto-oncogene 0.0211383
ANGPTL4 angiopoietin-like 4 0.021083
MACF1 microtubule-actin crosslinking factor 1 0.0208
ZNF148 zinc finger protein 148 0.0206882
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0203925
HELZ helicase with zinc finger 0.0203699
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0195831
RNF145 ring finger protein 145 0.019483
POTEF POTE ankyrin domain family, member F 0.0190905
NFE2L1 nuclear factor, erythroid 2-like 1 0.0186557
TXNIP thioredoxin interacting protein 0.0186167
MATR3 matrin 3 0.0185584
FERMT2 fermitin family member 2 0.0185347
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.0184821
ACTN1 actinin, alpha 1 0.0179478
CSNK1A1 casein kinase 1, alpha 1 0.0179226
ADAR adenosine deaminase, RNA-specific 0.0177282
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0176305
CSNK1D casein kinase 1, delta 0.0175776
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0174927
SEPTIN7 septin 7 0.0173798
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0173387
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0172714
EIF4B eukaryotic translation initiation factor 4B 0.0171978
RAB30 RAB30, member RAS oncogene family 0.017044
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0170422
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0169347
NUMA1 nuclear mitotic apparatus protein 1 0.0168924
LIMS1 LIM and senescent cell antigen-like domains 1 0.0168895
AAK1 AP2 associated kinase 1 0.0165487
PDE8A phosphodiesterase 8A 0.0164781
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0164292
ZMIZ1 zinc finger, MIZ-type containing 1 0.0164287
KCTD3 potassium channel tetramerization domain containing 3 0.0163626
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0163208
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0163019
SQSTM1 sequestosome 1 0.016268
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.016239
CCDC57 coiled-coil domain containing 57 0.016124
RPL27 ribosomal protein L27 0.0160719
BCAS3 breast carcinoma amplified sequence 3 0.0160599
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0159551
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0158389
ENAH enabled homolog (Drosophila) 0.0157758
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0156147

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.319632
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.175596
LSAMP limbic system-associated membrane protein -0.127957
NRG1 neuregulin 1 -0.0935922
TPT1 tumor protein, translationally-controlled 1 -0.0798301
COL1A1 collagen, type I, alpha 1 -0.0611442
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0589713
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0574455
RPS24 ribosomal protein S24 -0.0555175
CRH corticotropin releasing hormone -0.0486305
PTPRD protein tyrosine phosphatase, receptor type, D -0.0438605
BPTF bromodomain PHD finger transcription factor -0.0410206
ACTG1 actin gamma 1 -0.040067
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0395174
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0394803
RPL35A ribosomal protein L35a -0.0390363
SLC38A2 solute carrier family 38, member 2 -0.0389169
CENPF centromere protein F, 350/400kDa -0.0383201
ZNF804A zinc finger protein 804A -0.0372964
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0357492
PTMA prothymosin, alpha -0.0351018
PDZRN3 PDZ domain containing ring finger 3 -0.0341782
NREP neuronal regeneration related protein -0.0329827
EXT1 exostosin glycosyltransferase 1 -0.0328197
MAML2 mastermind-like 2 (Drosophila) -0.0314914
PARD3 par-3 family cell polarity regulator -0.0311135
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0287517
RPL38 ribosomal protein L38 -0.0277082
CPED1 cadherin-like and PC-esterase domain containing 1 -0.027475
COL3A1 collagen, type III, alpha 1 -0.0269874
LRP1B low density lipoprotein receptor-related protein 1B -0.0268518
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0260178
TMSB10 thymosin beta 10 -0.0259439
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0246157
TULP4 tubby like protein 4 -0.0235101
PRKCA protein kinase C, alpha -0.0233322
CUX1 cut-like homeobox 1 -0.023027
FKBP10 FK506 binding protein 10, 65 kDa -0.0226607
CNTN4 contactin 4 -0.0225882
ZBTB20 zinc finger and BTB domain containing 20 -0.0225354
RAB7A RAB7A, member RAS oncogene family -0.0225253
PCDH9 protocadherin 9 -0.0223408
H3-3B H3.3 histone B -0.0219318
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0218961
ATXN10 ataxin 10 -0.0215824
RAB1A RAB1A, member RAS oncogene family -0.0213817
RPL26 ribosomal protein L26 -0.0212032
NCOA7 nuclear receptor coactivator 7 -0.0211952
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0211287
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.021112
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0209249
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0208265
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0207191
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.020576
RPL7A ribosomal protein L7a -0.0205585
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0203015
EGR1 early growth response 1 -0.020017
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0198515
PCNP PEST proteolytic signal containing nuclear protein -0.0195408
NIPBL Nipped-B homolog (Drosophila) -0.0194815
RFC3 replication factor C (activator 1) 3, 38kDa -0.0192873
HMGB1 high mobility group box 1 -0.0192494
PCDH11Y protocadherin 11 Y-linked -0.0191597
RPS16 ribosomal protein S16 -0.0188991
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.018859
PCNX4 pecanex 4 -0.0187955
HIP1 huntingtin interacting protein 1 -0.0187618
RPL19 ribosomal protein L19 -0.0185826
FTL ferritin, light polypeptide -0.0185672
HMGB2 high mobility group box 2 -0.0184219
ADNP activity-dependent neuroprotector homeobox -0.0183957
THSD4 thrombospondin, type I, domain containing 4 -0.0182819
PRR11 proline rich 11 -0.0182513
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0182136
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.018185
ABI2 abl-interactor 2 -0.0179228
NUP214 nucleoporin 214kDa -0.0178775
CDH13 cadherin 13 -0.0177921
RPS21 ribosomal protein S21 -0.0177226
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0176238
IER3 immediate early response 3 -0.0175818
DNAH14 dynein, axonemal, heavy chain 14 -0.0175758
MED13 mediator complex subunit 13 -0.0175561
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0174792
THOC2 THO complex 2 -0.0173224
DLC1 DLC1 Rho GTPase activating protein -0.0172892
RPS27A ribosomal protein S27a -0.0172384
ZNF33A zinc finger protein 33A -0.0171234
CCDC47 coiled-coil domain containing 47 -0.0170395
HLA-B major histocompatibility complex, class I, B -0.0170244
RALYL RALY RNA binding protein-like -0.0169886
NALF1 NALCN channel auxiliary factor 1 -0.016819
PTPRM protein tyrosine phosphatase, receptor type, M -0.0167461
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0167419
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0166087
DSCAM Down syndrome cell adhesion molecule -0.0166057
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0166025
DKK2 dickkopf WNT signaling pathway inhibitor 2 -0.016577
KPNB1 karyopherin (importin) beta 1 -0.0164642
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0163741