NG25_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NG25 perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NG25_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.116759
MUC6 mucin 6, oligomeric mucus/gel-forming 0.102166
PTMA prothymosin, alpha 0.100786
FAT1 FAT atypical cadherin 1 0.0991541
EZR ezrin 0.0933151
LMO7 LIM domain 7 0.0878124
ASPH aspartate beta-hydroxylase 0.077185
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0699926
TXNIP thioredoxin interacting protein 0.0606713
MT2A metallothionein 2A 0.0551882
LDHA lactate dehydrogenase A 0.0549037
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0539461
EXT1 exostosin glycosyltransferase 1 0.053654
SOX9 SRY (sex determining region Y)-box 9 0.0495939
VEGFA vascular endothelial growth factor A 0.0489969
MYO1E myosin IE 0.0489772
LOC102724023 ES1 protein homolog, mitochondrial 0.0456652
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0454473
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0440094
PCBP2 poly(rC) binding protein 2 0.042653
PSD3 pleckstrin and Sec7 domain containing 3 0.0402597
AREG amphiregulin 0.039947
BAIAP2L1 BAI1-associated protein 2-like 1 0.0385599
ZSWIM6 zinc finger, SWIM-type containing 6 0.0385187
TPM4 tropomyosin 4 0.0377003
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0376559
MED13 mediator complex subunit 13 0.0375978
RPL3 ribosomal protein L3 0.0369045
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0366806
EMP1 epithelial membrane protein 1 0.0364682
GLS2 glutaminase 2 (liver, mitochondrial) 0.0349547
ERRFI1 ERBB receptor feedback inhibitor 1 0.0343077
TPM3 tropomyosin 3 0.0339256
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0336816
MBNL1 muscleblind-like splicing regulator 1 0.0335328
CALR calreticulin 0.0334485
AKAP13 A kinase (PRKA) anchor protein 13 0.0333595
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0330137
AFF1 AF4/FMR2 family, member 1 0.0326624
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0326402
LGALS3 lectin, galactoside-binding, soluble, 3 0.0323559
FNDC3B fibronectin type III domain containing 3B 0.0316754
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0312858
POTEF POTE ankyrin domain family, member F 0.0310832
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0310549
EGFR epidermal growth factor receptor 0.030945
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0303849
EREG epiregulin 0.03037
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0300198
RPS18 ribosomal protein S18 0.0299852
MCL1 myeloid cell leukemia 1 0.0299761
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0295208
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0292497
ANXA1 annexin A1 0.0290076
ITGA6 integrin, alpha 6 0.0277256
UGCG UDP-glucose ceramide glucosyltransferase 0.0275065
NDRG1 N-myc downstream regulated 1 0.0271269
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0269345
LAMA4 laminin, alpha 4 0.0268896
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0268447
MARCHF3 membrane associated ring-CH-type finger 3 0.0266224
UNC13B unc-13 homolog B (C. elegans) 0.0261203
WHRN whirlin 0.0259575
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0256576
MYO5B myosin VB 0.0250868
TES testin LIM domain protein 0.0250619
MUC17 mucin 17, cell surface associated 0.0248752
ITPRID2 ITPR interacting domain containing 2 0.0246591
LOC112694756 uncharaterized LOC112694756 0.0240056
TFF1 trefoil factor 1 0.0237044
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0235421
LMNA lamin A/C 0.0235108
USP6NL USP6 N-terminal like 0.0234437
SIK3 SIK family kinase 3 0.0231185
CLCN3 chloride channel, voltage-sensitive 3 0.0228297
KMT2E lysine (K)-specific methyltransferase 2E 0.022626
SLC38A2 solute carrier family 38, member 2 0.0226095
EPS8 epidermal growth factor receptor pathway substrate 8 0.0225428
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta 0.0224621
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.0222892
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) 0.0222297
MPRIP myosin phosphatase Rho interacting protein 0.0222137
KLF6 Kruppel-like factor 6 0.0220942
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0218809
CRY1 cryptochrome circadian clock 1 0.0218407
JARID2 jumonji, AT rich interactive domain 2 0.0218346
SQSTM1 sequestosome 1 0.0216332
ARHGAP21 Rho GTPase activating protein 21 0.0215847
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0214582
CLDN4 claudin 4 0.0211698
RCOR1 REST corepressor 1 0.0211269
PARD3 par-3 family cell polarity regulator 0.0209067
TJP1 tight junction protein 1 0.0208947
PPARD peroxisome proliferator-activated receptor delta 0.0205014
ZFP36L1 ZFP36 ring finger protein-like 1 0.0204301
TSC22D2 TSC22 domain family, member 2 0.0203249
PKM pyruvate kinase, muscle 0.0201489
RORA RAR-related orphan receptor A 0.0201404
APLP2 amyloid beta (A4) precursor-like protein 2 0.0201261
JUN jun proto-oncogene 0.0200826

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.168524
NPSR1 neuropeptide S receptor 1 -0.127795
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0897839
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.082999
GPHN gephyrin -0.0829799
NALF1 NALCN channel auxiliary factor 1 -0.0770725
PTPRR protein tyrosine phosphatase, receptor type, R -0.0613035
RPL35A ribosomal protein L35a -0.0562568
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0523825
RNF43 ring finger protein 43 -0.049671
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.048635
ALCAM activated leukocyte cell adhesion molecule -0.0476237
TNS4 tensin 4 -0.0470713
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0452523
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0431555
RPS6 ribosomal protein S6 -0.042943
TPT1 tumor protein, translationally-controlled 1 -0.0428372
CEMIP cell migration inducing protein, hyaluronan binding -0.0423248
FHIT fragile histidine triad -0.0417869
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0408668
EPCAM epithelial cell adhesion molecule -0.0404752
PNISR PNN-interacting serine/arginine-rich protein -0.0397548
VCL vinculin -0.0372785
RPLP2 ribosomal protein, large, P2 -0.0370845
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0368281
NRXN3 neurexin 3 -0.0355801
MECOM MDS1 and EVI1 complex locus -0.03471
RPL34 ribosomal protein L34 -0.0341332
RPS24 ribosomal protein S24 -0.0339266
TMSB10 thymosin beta 10 -0.0334471
RPL11 ribosomal protein L11 -0.032988
RPL36 ribosomal protein L36 -0.0327819
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0327145
RPL23 ribosomal protein L23 -0.0326696
RPLP1 ribosomal protein, large, P1 -0.0322851
RPS19 ribosomal protein S19 -0.0321635
TAS2R14 taste receptor, type 2, member 14 -0.0321391
GCC2 GRIP and coiled-coil domain containing 2 -0.0307989
RPL13A ribosomal protein L13a -0.0303083
H1-0 H1.0 linker histone -0.030282
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0299082
FOXP1 forkhead box P1 -0.0298855
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0294949
RPS29 ribosomal protein S29 -0.029466
ARL15 ADP-ribosylation factor-like 15 -0.0293654
AHNAK AHNAK nucleoprotein -0.0289816
RBM39 RNA binding motif protein 39 -0.0287518
RPL9 ribosomal protein L9 -0.0286936
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0285713
PIGR polymeric immunoglobulin receptor -0.0283466
RPL5 ribosomal protein L5 -0.0282338
NFIA nuclear factor I/A -0.0280934
RPS21 ribosomal protein S21 -0.0278682
CACNB2 calcium channel, voltage-dependent, beta 2 subunit -0.0276316
RPL37A ribosomal protein L37a -0.0273403
ZBTB20 zinc finger and BTB domain containing 20 -0.0271251
CCSER1 coiled-coil serine-rich protein 1 -0.0270754
RPLP0 ribosomal protein, large, P0 -0.0266539
SAMD5 sterile alpha motif domain containing 5 -0.0265757
FRMD5 FERM domain containing 5 -0.0262497
RPS3 ribosomal protein S3 -0.0258178
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0256603
TFRC transferrin receptor -0.0253674
FTL ferritin, light polypeptide -0.0251148
NIPBL Nipped-B homolog (Drosophila) -0.0249988
RPL19 ribosomal protein L19 -0.0249567
ANXA3 annexin A3 -0.0247026
RPL12 ribosomal protein L12 -0.0245859
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0244207
FAF1 Fas (TNFRSF6) associated factor 1 -0.0243634
BACE2 beta-site APP-cleaving enzyme 2 -0.0242469
HIBCH 3-hydroxyisobutyryl-CoA hydrolase -0.0241063
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor -0.0239151
RPL37 ribosomal protein L37 -0.0237807
ZNF518A zinc finger protein 518A -0.0236309
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.0236243
ARB2A ARB2 cotranscriptional regulator A -0.0235458
MMP12 matrix metallopeptidase 12 -0.0232688
RFX7 regulatory factor X, 7 -0.0230312
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0230304
COMMD10 COMM domain containing 10 -0.0227378
RBM25 RNA binding motif protein 25 -0.0226028
VDAC1 voltage-dependent anion channel 1 -0.0225629
ZNF292 zinc finger protein 292 -0.0224557
INSIG1 insulin induced gene 1 -0.0223142
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0222777
OGA O-GlcNAcase -0.0221403
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0220739
NCOR1 nuclear receptor corepressor 1 -0.0220641
ARF1 ADP-ribosylation factor 1 -0.0219509
SERINC5 serine incorporator 5 -0.0219199
PRRC2C proline-rich coiled-coil 2C -0.0217756
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0216541
MON2 MON2 homolog (S. cerevisiae) -0.0216529
FOXP2 forkhead box P2 -0.0215079
RPL32 ribosomal protein L32 -0.0214864
RPL4 ribosomal protein L4 -0.0213076
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0212129
KLF3 Kruppel-like factor 3 (basic) -0.0212018
CDK6 cyclin-dependent kinase 6 -0.0211129