NG25_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NG25 perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NG25_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.124662
PCBP2 poly(rC) binding protein 2 0.0534313
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0514172
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0508512
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0506754
MCL1 myeloid cell leukemia 1 0.0474581
UBASH3B ubiquitin associated and SH3 domain containing B 0.0413168
COPA coatomer protein complex, subunit alpha 0.0408343
TPM3 tropomyosin 3 0.0400063
APP amyloid beta (A4) precursor protein 0.0387037
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0369751
STC1 stanniocalcin 1 0.0356529
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0354779
FAM107B family with sequence similarity 107, member B 0.0354307
RICTOR RPTOR independent companion of MTOR, complex 2 0.03471
SMOC1 SPARC related modular calcium binding 1 0.0342378
EEF2 eukaryotic translation elongation factor 2 0.0339065
PUM1 pumilio RNA-binding family member 1 0.0335992
MACF1 microtubule-actin crosslinking factor 1 0.0333337
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0330986
CCNL1 cyclin L1 0.0329583
CALR calreticulin 0.0322745
ERBIN erbb2 interacting protein 0.0319626
FMNL2 formin-like 2 0.0313825
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.029171
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0289117
WAC WW domain containing adaptor with coiled-coil 0.0287081
AKAP12 A kinase (PRKA) anchor protein 12 0.0284548
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0281221
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0274756
ANKRD11 ankyrin repeat domain 11 0.0274052
RPL3 ribosomal protein L3 0.0269949
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0266386
BRD2 bromodomain containing 2 0.0262944
ZFAND3 zinc finger, AN1-type domain 3 0.0259625
FNDC3B fibronectin type III domain containing 3B 0.0258301
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0255979
BIRC6 baculoviral IAP repeat containing 6 0.0252907
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0250764
PDIA6 protein disulfide isomerase family A, member 6 0.0247677
PTK2 protein tyrosine kinase 2 0.0245927
SAMD4A sterile alpha motif domain containing 4A 0.0241327
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0241213
ZNF207 zinc finger protein 207 0.0238072
BHLHE40 basic helix-loop-helix family, member e40 0.0235927
TRIO trio Rho guanine nucleotide exchange factor 0.0234968
HLA-A major histocompatibility complex, class I, A 0.0234838
LDHA lactate dehydrogenase A 0.0229679
ERRFI1 ERBB receptor feedback inhibitor 1 0.0229575
AKAP13 A kinase (PRKA) anchor protein 13 0.0223849
YTHDC1 YTH domain containing 1 0.02237
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0220309
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0216441
ITCH itchy E3 ubiquitin protein ligase 0.0214573
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0214263
POTEF POTE ankyrin domain family, member F 0.0212442
LOC102724023 ES1 protein homolog, mitochondrial 0.0211746
UGCG UDP-glucose ceramide glucosyltransferase 0.0211042
ADM adrenomedullin 0.0208772
DOCK4 dedicator of cytokinesis 4 0.0205982
KTN1 kinectin 1 (kinesin receptor) 0.0204294
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0203585
RPS18 ribosomal protein S18 0.0200352
DSCAM Down syndrome cell adhesion molecule 0.01994
HDAC9 histone deacetylase 9 0.0198798
PARD3 par-3 family cell polarity regulator 0.0196963
SIK3 SIK family kinase 3 0.0195471
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.019294
RBM25 RNA binding motif protein 25 0.0192264
WIPF2 WAS/WASL interacting protein family, member 2 0.0192088
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0189566
MYH9 myosin, heavy chain 9, non-muscle 0.0189485
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0188653
APLP2 amyloid beta (A4) precursor-like protein 2 0.0187975
PUM2 pumilio RNA-binding family member 2 0.0183222
WDR43 WD repeat domain 43 0.0183138
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0182763
SRP54 signal recognition particle 54kDa 0.017938
TPD52 tumor protein D52 0.0177856
INO80 INO80 complex subunit 0.0177222
RASAL2 RAS protein activator like 2 0.0176705
FERMT2 fermitin family member 2 0.0176541
JUN jun proto-oncogene 0.0175549
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0174746
TRA2A transformer 2 alpha homolog (Drosophila) 0.0171189
UBC ubiquitin C 0.0171014
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0170364
ARHGAP26 Rho GTPase activating protein 26 0.0169778
FOCAD focadhesin 0.0168365
ADAM17 ADAM metallopeptidase domain 17 0.0166637
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0165827
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0165489
MSN moesin 0.0164905
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0163706
ACTN1 actinin, alpha 1 0.0163049
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0160664
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0160649
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0160334
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0158379
TERF2IP telomeric repeat binding factor 2, interacting protein 0.0157369

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.212834
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.177911
PDE4D phosphodiesterase 4D, cAMP-specific -0.17308
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.127515
FTL ferritin, light polypeptide -0.0938435
PM20D1 peptidase M20 domain containing 1 -0.0925724
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0835329
CENPF centromere protein F, 350/400kDa -0.0592325
GRAMD1B GRAM domain containing 1B -0.0584942
TM4SF1 transmembrane 4 L six family member 1 -0.0577928
WWOX WW domain containing oxidoreductase -0.0540243
RPLP1 ribosomal protein, large, P1 -0.0509291
RPL19 ribosomal protein L19 -0.0472414
RPL23 ribosomal protein L23 -0.0441228
ASPH aspartate beta-hydroxylase -0.0438657
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0407265
BICC1 BicC family RNA binding protein 1 -0.0398732
TPT1 tumor protein, translationally-controlled 1 -0.0388201
RPS21 ribosomal protein S21 -0.0382649
RPL35A ribosomal protein L35a -0.0365304
MKI67 marker of proliferation Ki-67 -0.0362511
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0352183
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0346156
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0343013
RPL37A ribosomal protein L37a -0.0338714
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0303428
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0300281
RPL26 ribosomal protein L26 -0.0299156
BASP1 brain abundant, membrane attached signal protein 1 -0.0290486
RPS8 ribosomal protein S8 -0.0286164
FTH1 ferritin, heavy polypeptide 1 -0.0285376
TXNRD1 thioredoxin reductase 1 -0.0285295
RPS27A ribosomal protein S27a -0.0282057
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0270241
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0268105
RPL11 ribosomal protein L11 -0.0264234
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0261353
RPL9 ribosomal protein L9 -0.0258042
RPS29 ribosomal protein S29 -0.0257422
TMSB10 thymosin beta 10 -0.0256708
EFNA5 ephrin-A5 -0.0254332
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0254178
RPS24 ribosomal protein S24 -0.0253818
RPS19 ribosomal protein S19 -0.0253548
FHIT fragile histidine triad -0.0251601
RPS3 ribosomal protein S3 -0.0245092
RPS12 ribosomal protein S12 -0.0244172
ADGRG6 adhesion G protein-coupled receptor G6 -0.0241361
TUBB tubulin, beta class I -0.0238232
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.023684
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0232678
TFPI2 tissue factor pathway inhibitor 2 -0.0230771
ACTG1 actin gamma 1 -0.0228699
RPL37 ribosomal protein L37 -0.022704
OSMR oncostatin M receptor -0.0224942
RPS23 ribosomal protein S23 -0.0224899
RPL4 ribosomal protein L4 -0.0224071
RPS6 ribosomal protein S6 -0.0222826
NNMT nicotinamide N-methyltransferase -0.0217491
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0216853
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 -0.0215079
CAVIN1 caveolae associated protein 1 -0.0215017
MIS18BP1 MIS18 binding protein 1 -0.0211438
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0210902
RPL30 ribosomal protein L30 -0.0209421
NEGR1 neuronal growth regulator 1 -0.02079
NCOA7 nuclear receptor coactivator 7 -0.0204557
HMGB1 high mobility group box 1 -0.0202816
RPL31 ribosomal protein L31 -0.0199653
RAD51B RAD51 paralog B -0.0198308
RSPO3 R-spondin 3 -0.0196684
LDHB lactate dehydrogenase B -0.0195007
HSPA8 heat shock 70kDa protein 8 -0.0191806
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 -0.0189844
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0189327
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0186921
RPL34 ribosomal protein L34 -0.018612
RPL7 ribosomal protein L7 -0.0185295
ZNF292 zinc finger protein 292 -0.0185196
DST dystonin -0.0185146
RPS25 ribosomal protein S25 -0.0185109
TTC28 tetratricopeptide repeat domain 28 -0.0183971
SGO2 shugoshin 2 -0.0180532
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0179963
AURKA aurora kinase A -0.0177611
RFWD3 ring finger and WD repeat domain 3 -0.0177427
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.017512
RPS5 ribosomal protein S5 -0.0173671
GCLC glutamate-cysteine ligase, catalytic subunit -0.0173052
ZMYND8 zinc finger, MYND-type containing 8 -0.0171476
RACK1 receptor for activated C kinase 1 -0.0171025
RPLP0 ribosomal protein, large, P0 -0.0170547
GPC6 glypican 6 -0.017022
MAP1B microtubule-associated protein 1B -0.016957
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0168141
RPL38 ribosomal protein L38 -0.0167729
RPS20 ribosomal protein S20 -0.0165435
RPL13A ribosomal protein L13a -0.0165159
CENPE centromere protein E, 312kDa -0.0164265
DEK DEK proto-oncogene -0.0163814