NG25_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NG25 perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NG25_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.101987
IGF2 insulin-like growth factor 2 0.0855088
PDE4D phosphodiesterase 4D, cAMP-specific 0.0829956
MT2A metallothionein 2A 0.0729051
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0708019
SAMD4A sterile alpha motif domain containing 4A 0.0569275
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.050573
NABP1 nucleic acid binding protein 1 0.0503548
LIMCH1 LIM and calponin homology domains 1 0.0496923
MCL1 myeloid cell leukemia 1 0.0488955
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0486827
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0486633
ZSWIM6 zinc finger, SWIM-type containing 6 0.0477081
ANO6 anoctamin 6 0.0469239
PKM pyruvate kinase, muscle 0.0440654
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.043832
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0430515
FNDC3A fibronectin type III domain containing 3A 0.042861
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0384737
BACE2 beta-site APP-cleaving enzyme 2 0.0383491
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0369654
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0356626
TSC22D2 TSC22 domain family, member 2 0.0355989
ASPH aspartate beta-hydroxylase 0.0342803
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0338071
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0334633
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0326354
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0322136
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0318299
RPL37 ribosomal protein L37 0.0317307
AKAP13 A kinase (PRKA) anchor protein 13 0.0315463
RPS12 ribosomal protein S12 0.0313082
RPLP1 ribosomal protein, large, P1 0.0309511
RPL38 ribosomal protein L38 0.0293944
CDCP1 CUB domain containing protein 1 0.0292321
INTS6 integrator complex subunit 6 0.0290709
GDNF glial cell derived neurotrophic factor 0.0290013
FBXO11 F-box protein 11 0.0287458
MACF1 microtubule-actin crosslinking factor 1 0.0285267
MBD5 methyl-CpG binding domain protein 5 0.0283466
EIF1 eukaryotic translation initiation factor 1 0.0282758
APLP2 amyloid beta (A4) precursor-like protein 2 0.0279201
RPLP0 ribosomal protein, large, P0 0.0279163
SMAD3 SMAD family member 3 0.0278991
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0278571
ALCAM activated leukocyte cell adhesion molecule 0.0277916
RPL11 ribosomal protein L11 0.0274273
ARB2A ARB2 cotranscriptional regulator A 0.0274225
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0272393
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0272162
RAB7A RAB7A, member RAS oncogene family 0.0269324
HDLBP high density lipoprotein binding protein 0.0267837
IQGAP1 IQ motif containing GTPase activating protein 1 0.0266614
PCBP2 poly(rC) binding protein 2 0.0266153
EFNA5 ephrin-A5 0.026513
GSK3B glycogen synthase kinase 3 beta 0.026209
RPS14 ribosomal protein S14 0.0261531
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0260774
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0250652
CD46 CD46 molecule, complement regulatory protein 0.0250207
RPS8 ribosomal protein S8 0.0249537
YTHDC1 YTH domain containing 1 0.0248782
FLNB filamin B, beta 0.0241903
PDE10A phosphodiesterase 10A 0.0240152
WWOX WW domain containing oxidoreductase 0.0239213
CMIP c-Maf inducing protein 0.0237092
PABPC1 poly(A) binding protein, cytoplasmic 1 0.023233
GRAMD1B GRAM domain containing 1B 0.0229609
ERRFI1 ERBB receptor feedback inhibitor 1 0.0222673
CTBP2 C-terminal binding protein 2 0.0222498
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0222341
KRT17 keratin 17, type I 0.0222297
AKAP12 A kinase (PRKA) anchor protein 12 0.0221026
FN1 fibronectin 1 0.0219318
METTL15 methyltransferase like 15 0.0216666
BHLHE40 basic helix-loop-helix family, member e40 0.0215739
NF1 neurofibromin 1 0.0214849
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.021429
THSD4 thrombospondin, type I, domain containing 4 0.0214174
WWTR1 WW domain containing transcription regulator 1 0.0212379
BAIAP2L1 BAI1-associated protein 2-like 1 0.0211303
MAML3 mastermind-like 3 (Drosophila) 0.0211221
ELL2 elongation factor, RNA polymerase II, 2 0.0208965
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0208079
SH3KBP1 SH3-domain kinase binding protein 1 0.0207765
UTRN utrophin 0.0205752
CXCL8 chemokine (C-X-C motif) ligand 8 0.020463
TAOK3 TAO kinase 3 0.020407
FBF1 Fas (TNFRSF6) binding factor 1 0.0201052
LAMC2 laminin, gamma 2 0.0200685
LOC112694756 uncharaterized LOC112694756 0.0200588
CHD4 chromodomain helicase DNA binding protein 4 0.0199676
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.0197407
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0195849
TBC1D22A TBC1 domain family, member 22A 0.0191209
PCGF5 polycomb group ring finger 5 0.0189902
EGFR epidermal growth factor receptor 0.018779
SHOC2 soc-2 suppressor of clear homolog (C. elegans) 0.0187539
TAS2R14 taste receptor, type 2, member 14 0.0187315
MRPL13 mitochondrial ribosomal protein L13 0.0187256

decreased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 -0.063915
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0549743
QKI QKI, KH domain containing, RNA binding -0.0448246
GRB10 growth factor receptor-bound protein 10 -0.0442673
INHBA inhibin, beta A -0.0428057
TM9SF3 transmembrane 9 superfamily member 3 -0.040988
LSAMP limbic system-associated membrane protein -0.0407221
FMNL2 formin-like 2 -0.0385444
CD44 CD44 molecule (Indian blood group) -0.0362578
EGR1 early growth response 1 -0.035887
UBE2K ubiquitin-conjugating enzyme E2K -0.0344079
PLAU plasminogen activator, urokinase -0.0342439
ATOSA atos homolog A -0.0339691
PLAUR plasminogen activator, urokinase receptor -0.0335922
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0330771
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0327428
FDPS farnesyl diphosphate synthase -0.0327342
USP3 ubiquitin specific peptidase 3 -0.0325726
CHD1 chromodomain helicase DNA binding protein 1 -0.032372
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0321012
NDRG1 N-myc downstream regulated 1 -0.0320445
BRWD1 bromodomain and WD repeat domain containing 1 -0.031849
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0310704
TRRAP transformation/transcription domain-associated protein -0.0310499
PTBP3 polypyrimidine tract binding protein 3 -0.0309336
NPC1 Niemann-Pick disease, type C1 -0.0309008
RAI14 retinoic acid induced 14 -0.0301966
SPAG9 sperm associated antigen 9 -0.0300495
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0294334
CHD9 chromodomain helicase DNA binding protein 9 -0.0293113
NBAS neuroblastoma amplified sequence -0.0288307
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0287586
ARHGAP21 Rho GTPase activating protein 21 -0.0286907
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0282502
CSDE1 cold shock domain containing E1, RNA-binding -0.0280098
IGFBP3 insulin-like growth factor binding protein 3 -0.0276173
MORF4L2 mortality factor 4 like 2 -0.027499
DENND4C DENN/MADD domain containing 4C -0.0274557
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0273431
TTC17 tetratricopeptide repeat domain 17 -0.0272237
H3-3B H3.3 histone B -0.0270562
COL6A3 collagen, type VI, alpha 3 -0.0269183
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0268066
JUN jun proto-oncogene -0.0264842
FOXP1 forkhead box P1 -0.0264705
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0261987
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.026013
RIGI RNA sensor RIG-I -0.0258007
TNPO1 transportin 1 -0.0252861
DST dystonin -0.025258
MARCHF6 membrane associated ring-CH-type finger 6 -0.0251829
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0251688
AFF1 AF4/FMR2 family, member 1 -0.0247942
RICTOR RPTOR independent companion of MTOR, complex 2 -0.02476
KIF13B kinesin family member 13B -0.0247033
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0240721
CLDN7 claudin 7 -0.0237984
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0237374
GPC6 glypican 6 -0.0236873
MAP2K1 mitogen-activated protein kinase kinase 1 -0.0236561
PIAS1 protein inhibitor of activated STAT, 1 -0.0235398
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0234443
VIM vimentin -0.0234208
TMEM41B transmembrane protein 41B -0.0233378
RNF145 ring finger protein 145 -0.0232193
KDM3A lysine (K)-specific demethylase 3A -0.0231044
TJP1 tight junction protein 1 -0.0230074
FMN1 formin 1 -0.0229923
COPS2 COP9 signalosome subunit 2 -0.0228844
STRN3 striatin, calmodulin binding protein 3 -0.0228177
GCLC glutamate-cysteine ligase, catalytic subunit -0.0227118
RBM26 RNA binding motif protein 26 -0.0226714
ZNF644 zinc finger protein 644 -0.0226312
TRPM7 transient receptor potential cation channel, subfamily M, member 7 -0.0226165
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0225807
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0225052
ARHGAP12 Rho GTPase activating protein 12 -0.0224711
KDM5B lysine (K)-specific demethylase 5B -0.022438
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0223608
EIF5B eukaryotic translation initiation factor 5B -0.0223039
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0222254
TRA2A transformer 2 alpha homolog (Drosophila) -0.022021
GATAD2B GATA zinc finger domain containing 2B -0.021974
RRBP1 ribosome binding protein 1 -0.0218854
COPA coatomer protein complex, subunit alpha -0.0217745
ESYT2 extended synaptotagmin-like protein 2 -0.0217607
GPBP1L1 GC-rich promoter binding protein 1-like 1 -0.0216455
MYO10 myosin X -0.0216398
CA12 carbonic anhydrase XII -0.0215652
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0212806
NRG1 neuregulin 1 -0.021272
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.0211651
VPS26A vacuolar protein sorting 26 homolog A (S. pombe) -0.0211405
AKR1C1 aldo-keto reductase family 1, member C1 -0.0211014
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.021098
PPP1R12B protein phosphatase 1, regulatory subunit 12B -0.0210694
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0210344
SRSF11 serine/arginine-rich splicing factor 11 -0.0209992
FNBP1L formin binding protein 1-like -0.0208951
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0208608