NG25_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NG25 perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NG25_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PCBP2 poly(rC) binding protein 2 0.140384
EEF2 eukaryotic translation elongation factor 2 0.10299
MCL1 myeloid cell leukemia 1 0.0940874
PDLIM5 PDZ and LIM domain 5 0.0898366
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0707926
SMOC1 SPARC related modular calcium binding 1 0.0691186
LDHA lactate dehydrogenase A 0.0660973
RPL3 ribosomal protein L3 0.0631275
GRAMD1B GRAM domain containing 1B 0.0616762
RPS18 ribosomal protein S18 0.0605774
TPM3 tropomyosin 3 0.058702
KYNU kynureninase 0.0545522
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0532946
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0479556
ASPH aspartate beta-hydroxylase 0.047691
PKM pyruvate kinase, muscle 0.0476766
DOCK4 dedicator of cytokinesis 4 0.0474407
SPTBN1 spectrin, beta, non-erythrocytic 1 0.047064
POTEF POTE ankyrin domain family, member F 0.0455674
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0423531
KRT19 keratin 19, type I 0.041662
ESYT2 extended synaptotagmin-like protein 2 0.0409987
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0401628
SOX9 SRY (sex determining region Y)-box 9 0.0400763
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0378078
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0373742
RPS4X ribosomal protein S4, X-linked 0.0369667
RPS12 ribosomal protein S12 0.0366026
RAD51B RAD51 paralog B 0.0359138
RPS2 ribosomal protein S2 0.0353416
EZR ezrin 0.0350031
CHD1 chromodomain helicase DNA binding protein 1 0.0340941
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0340158
ENO1 enolase 1, (alpha) 0.0339052
CD109 CD109 molecule 0.0338483
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0330366
MT2A metallothionein 2A 0.032631
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0325056
PSD3 pleckstrin and Sec7 domain containing 3 0.0322918
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.030087
MSN moesin 0.0299433
PRKN parkin RBR E3 ubiquitin protein ligase 0.0291953
APLP2 amyloid beta (A4) precursor-like protein 2 0.0287365
ZSWIM6 zinc finger, SWIM-type containing 6 0.0287296
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0281892
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0279276
TGFBR1 transforming growth factor, beta receptor 1 0.027809
AKAP12 A kinase (PRKA) anchor protein 12 0.0275274
MYH9 myosin, heavy chain 9, non-muscle 0.0272067
EFNA5 ephrin-A5 0.0265954
SET SET nuclear proto-oncogene 0.0260944
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0258722
LOC102724023 ES1 protein homolog, mitochondrial 0.0257636
TRIO trio Rho guanine nucleotide exchange factor 0.0253102
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0251833
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0250174
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0250135
CXCL8 chemokine (C-X-C motif) ligand 8 0.0248067
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0245105
YBX1 Y box binding protein 1 0.0241828
CTIF CBP80/20-dependent translation initiation factor 0.0238616
RPL21 ribosomal protein L21 0.0234695
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0233745
FAT1 FAT atypical cadherin 1 0.0231454
PYGL phosphorylase, glycogen, liver 0.0230951
SAMD4A sterile alpha motif domain containing 4A 0.0228124
RPS7 ribosomal protein S7 0.0222769
EIF5 eukaryotic translation initiation factor 5 0.0221977
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K 0.02189
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0218632
HLA-A major histocompatibility complex, class I, A 0.0217011
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0216188
NFE2L1 nuclear factor, erythroid 2-like 1 0.0214639
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0209955
SH3KBP1 SH3-domain kinase binding protein 1 0.0209417
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0209122
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0208105
TNIP1 TNFAIP3 interacting protein 1 0.020738
SQSTM1 sequestosome 1 0.0207327
APP amyloid beta (A4) precursor protein 0.020374
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0203415
DDIT4 DNA-damage-inducible transcript 4 0.0202433
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0202242
NCAM1 neural cell adhesion molecule 1 0.0200819
EEF1G eukaryotic translation elongation factor 1 gamma 0.0199862
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0198155
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0195895
FTH1 ferritin, heavy polypeptide 1 0.0192727
NONO non-POU domain containing, octamer-binding 0.0190203
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0189913
LOC112694756 uncharaterized LOC112694756 0.0186138
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0184508
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0182774
FMNL2 formin-like 2 0.0181793
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0178343
FLNA filamin A, alpha 0.0177745
ZMIZ1 zinc finger, MIZ-type containing 1 0.0177689
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta 0.0177652
AKAP13 A kinase (PRKA) anchor protein 13 0.0176558
HYOU1 hypoxia up-regulated 1 0.0172899

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.247903
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.2314
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.180338
TPT1 tumor protein, translationally-controlled 1 -0.11806
PDE4D phosphodiesterase 4D, cAMP-specific -0.117888
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.112136
TM4SF1 transmembrane 4 L six family member 1 -0.0957674
NALF1 NALCN channel auxiliary factor 1 -0.0839406
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0771011
TMSB10 thymosin beta 10 -0.0765345
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0746997
RPS24 ribosomal protein S24 -0.0712318
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0707117
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0683756
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.068287
PTMA prothymosin, alpha -0.0669335
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.060117
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0594679
HLA-B major histocompatibility complex, class I, B -0.0581108
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.057975
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0536118
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0504938
SMYD3 SET and MYND domain containing 3 -0.0503128
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0494155
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0454713
RPL35A ribosomal protein L35a -0.0448811
ELL2 elongation factor, RNA polymerase II, 2 -0.0425086
TFPI2 tissue factor pathway inhibitor 2 -0.0418609
RPLP1 ribosomal protein, large, P1 -0.0418122
CANX calnexin -0.0410291
VCL vinculin -0.0405761
NCOA7 nuclear receptor coactivator 7 -0.0394318
SOX4 SRY (sex determining region Y)-box 4 -0.038952
STC1 stanniocalcin 1 -0.037098
RPL34 ribosomal protein L34 -0.0361502
WSB1 WD repeat and SOCS box containing 1 -0.0351602
SLC38A2 solute carrier family 38, member 2 -0.0339874
OGA O-GlcNAcase -0.0333229
BCAS3 breast carcinoma amplified sequence 3 -0.0329118
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0328666
KDM3A lysine (K)-specific demethylase 3A -0.032837
RPS21 ribosomal protein S21 -0.0327936
ANKHD1 ankyrin repeat and KH domain containing 1 -0.032532
RPL7A ribosomal protein L7a -0.0323049
RPL38 ribosomal protein L38 -0.0313499
ZMYND8 zinc finger, MYND-type containing 8 -0.0311847
PCBP3 poly(rC) binding protein 3 -0.0310147
LIMCH1 LIM and calponin homology domains 1 -0.0308436
RPL19 ribosomal protein L19 -0.0304362
KPNB1 karyopherin (importin) beta 1 -0.0300861
NCKAP5 NCK-associated protein 5 -0.029859
S100A6 S100 calcium binding protein A6 -0.0297081
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.029468
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0294326
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0292587
ACTG1 actin gamma 1 -0.0279443
CDH13 cadherin 13 -0.027873
BZW1 basic leucine zipper and W2 domains 1 -0.0275751
PRRC2C proline-rich coiled-coil 2C -0.0274908
FOXC1 forkhead box C1 -0.0274176
PTGR1 prostaglandin reductase 1 -0.0272153
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0271648
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0270587
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0270326
FNDC3A fibronectin type III domain containing 3A -0.0267863
JMJD1C jumonji domain containing 1C -0.0264271
SEC31A SEC31 homolog A (S. cerevisiae) -0.025968
NAMPT nicotinamide phosphoribosyltransferase -0.0258697
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0257191
PDIA3 protein disulfide isomerase family A, member 3 -0.0256835
COL5A2 collagen, type V, alpha 2 -0.025593
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0251871
ATAD1 ATPase family, AAA domain containing 1 -0.0251857
TMSB4X thymosin beta 4, X-linked -0.0251617
GNAS GNAS complex locus -0.0251579
RAB1A RAB1A, member RAS oncogene family -0.0251193
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0248014
MON2 MON2 homolog (S. cerevisiae) -0.0246599
SLC16A6 solute carrier family 16, member 6 -0.0246209
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0244753
KIAA0825 KIAA0825 -0.0244546
IFIH1 interferon induced with helicase C domain 1 -0.0237346
NT5C2 5'-nucleotidase, cytosolic II -0.0236315
PBX1 pre-B-cell leukemia homeobox 1 -0.0235275
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0231852
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.022933
IFI16 interferon, gamma-inducible protein 16 -0.0221356
RPS16 ribosomal protein S16 -0.0218622
PCNX4 pecanex 4 -0.0218083
STEAP1B STEAP family member 1B -0.021728
RPS27A ribosomal protein S27a -0.0217058
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0216633
NPEPPS aminopeptidase puromycin sensitive -0.0213811
MAP4 microtubule-associated protein 4 -0.0212057
RPL6 ribosomal protein L6 -0.0210431
INHBA inhibin, beta A -0.0209849
RPL36A ribosomal protein L36a -0.0209383
RBM39 RNA binding motif protein 39 -0.0209331
IGF1R insulin-like growth factor 1 receptor -0.0209157
RPS25 ribosomal protein S25 -0.0208645