NVP-BHG712_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NVP-BHG712 perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NVP-BHG712_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0507538
EEF2 eukaryotic translation elongation factor 2 0.0505659
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0392049
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0303686
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0278757
RPS3 ribosomal protein S3 0.0261509
NDRG1 N-myc downstream regulated 1 0.0246208
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0223373
LOC112694756 uncharaterized LOC112694756 0.0222397
MBNL2 muscleblind-like splicing regulator 2 0.0215265
VEGFA vascular endothelial growth factor A 0.0212828
RORA RAR-related orphan receptor A 0.0211979
TPM1 tropomyosin 1 (alpha) 0.0206815
MCL1 myeloid cell leukemia 1 0.0206742
TLE4 transducin-like enhancer of split 4 0.0199623
HSPA8 heat shock 70kDa protein 8 0.019946
FERMT2 fermitin family member 2 0.0189753
PCBP2 poly(rC) binding protein 2 0.0189505
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0188796
ANGPTL4 angiopoietin-like 4 0.0181292
FLNB filamin B, beta 0.0179315
CSNK1A1 casein kinase 1, alpha 1 0.0178981
HELZ helicase with zinc finger 0.0172997
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0171747
RPL3 ribosomal protein L3 0.0169647
LIMA1 LIM domain and actin binding 1 0.0168124
XPO1 exportin 1 0.016728
NFE2L1 nuclear factor, erythroid 2-like 1 0.0167099
SQSTM1 sequestosome 1 0.0166499
WDR45B WD repeat domain 45B 0.0166121
VCL vinculin 0.0164845
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0162785
FAM13A family with sequence similarity 13, member A 0.0161261
SRRM2 serine/arginine repetitive matrix 2 0.015855
PTEN phosphatase and tensin homolog 0.0157386
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0156925
PLEC plectin 0.0156199
GATAD2B GATA zinc finger domain containing 2B 0.015579
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0155524
RPL7 ribosomal protein L7 0.0154721
MYH9 myosin, heavy chain 9, non-muscle 0.0154633
PDE4D phosphodiesterase 4D, cAMP-specific 0.0153895
YTHDC1 YTH domain containing 1 0.0151459
PALLD palladin, cytoskeletal associated protein 0.0150477
PRRC2A proline-rich coiled-coil 2A 0.0148425
MXI1 MAX interactor 1, dimerization protein 0.014482
PRPF8 pre-mRNA processing factor 8 0.0143548
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0143058
SLC35F5 solute carrier family 35, member F5 0.0142999
ARHGAP12 Rho GTPase activating protein 12 0.0137763
CD46 CD46 molecule, complement regulatory protein 0.013695
ENO2 enolase 2 (gamma, neuronal) 0.0136793
MYO1E myosin IE 0.0133575
FAT1 FAT atypical cadherin 1 0.0130911
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.012991
NUMA1 nuclear mitotic apparatus protein 1 0.0129625
ERRFI1 ERBB receptor feedback inhibitor 1 0.0128966
EIF4H eukaryotic translation initiation factor 4H 0.0128329
HILPDA hypoxia inducible lipid droplet-associated 0.0128012
ARRDC3 arrestin domain containing 3 0.0127925
DPH6 diphthamine biosynthesis 6 0.012674
DDIT4 DNA-damage-inducible transcript 4 0.0126191
FLNA filamin A, alpha 0.0123712
KTN1 kinectin 1 (kinesin receptor) 0.0123551
DUSP10 dual specificity phosphatase 10 0.012317
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0120356
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.0119732
SYNPO2 synaptopodin 2 0.01187
CDK19 cyclin-dependent kinase 19 0.011765
AKAP9 A kinase (PRKA) anchor protein 9 0.0117128
CEMIP cell migration inducing protein, hyaluronan binding 0.0116305
HBS1L HBS1-like translational GTPase 0.0116103
SPTLC1 serine palmitoyltransferase, long chain base subunit 1 0.0115985
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0115934
RACK1 receptor for activated C kinase 1 0.0114874
KMT2E lysine (K)-specific methyltransferase 2E 0.0114466
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0114172
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0113823
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.011332
PCBP3 poly(rC) binding protein 3 0.0111744
RGS4 regulator of G-protein signaling 4 0.0111678
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0111167
PDIA6 protein disulfide isomerase family A, member 6 0.0110914
TOX thymocyte selection-associated high mobility group box 0.0110896
OGA O-GlcNAcase 0.011047
RPS17 ribosomal protein S17 0.0109998
RTN4 reticulon 4 0.0109546
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0109068
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0108958
RPS12 ribosomal protein S12 0.0108092
CPNE1 copine I 0.0107895
NIBAN2 niban apoptosis regulator 2 0.0107722
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0107253
MACROD2 MACRO domain containing 2 0.0106583
PRRC2B proline-rich coiled-coil 2B 0.0106521
RPS18 ribosomal protein S18 0.0106164
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0106111
FTH1 ferritin, heavy polypeptide 1 0.0106053
PRELID2 PRELI domain containing 2 0.0105852
EIF4B eukaryotic translation initiation factor 4B 0.0105411

decreased expression

Symbol Name Standardized Value
NRG1 neuregulin 1 -0.20346
LSAMP limbic system-associated membrane protein -0.190406
IGF2 insulin-like growth factor 2 -0.145876
NALF1 NALCN channel auxiliary factor 1 -0.107478
PTMA prothymosin, alpha -0.104031
EXT1 exostosin glycosyltransferase 1 -0.101176
COL1A1 collagen, type I, alpha 1 -0.0916134
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0877909
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0830303
COL3A1 collagen, type III, alpha 1 -0.0827858
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0747431
PRKCA protein kinase C, alpha -0.0746882
PTPRD protein tyrosine phosphatase, receptor type, D -0.0735771
THSD4 thrombospondin, type I, domain containing 4 -0.070179
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0696026
SYT1 synaptotagmin I -0.0658204
FMN1 formin 1 -0.0634573
CRH corticotropin releasing hormone -0.0599085
ZNF804A zinc finger protein 804A -0.0570511
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0566094
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0546559
RPS24 ribosomal protein S24 -0.0511714
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0496619
VIM vimentin -0.0452076
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0437134
IFI16 interferon, gamma-inducible protein 16 -0.0434933
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0431895
MEIS2 Meis homeobox 2 -0.0417731
DKK2 dickkopf WNT signaling pathway inhibitor 2 -0.0417199
PSD3 pleckstrin and Sec7 domain containing 3 -0.0417015
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0414336
RPL19 ribosomal protein L19 -0.0399859
TPT1 tumor protein, translationally-controlled 1 -0.0389698
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0379467
MSI2 musashi RNA-binding protein 2 -0.0374659
COL4A5 collagen, type IV, alpha 5 -0.0373116
BPTF bromodomain PHD finger transcription factor -0.0370343
KLHL13 kelch-like family member 13 -0.0368816
TRIB2 tribbles pseudokinase 2 -0.0351806
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0348325
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0347495
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0346427
ATXN10 ataxin 10 -0.0344183
PTPRG protein tyrosine phosphatase, receptor type, G -0.034203
MX2 MX dynamin-like GTPase 2 -0.0335699
NCAM2 neural cell adhesion molecule 2 -0.0333079
LIMCH1 LIM and calponin homology domains 1 -0.033214
PRKG1 protein kinase, cGMP-dependent, type I -0.0329942
GPC5 glypican 5 -0.0329579
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.0322569
SOS1 son of sevenless homolog 1 (Drosophila) -0.0322374
PTPRK protein tyrosine phosphatase, receptor type, K -0.0321234
AOPEP aminopeptidase O (putative) -0.0315413
CNTN4 contactin 4 -0.0314007
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0311608
BICD1 bicaudal D homolog 1 (Drosophila) -0.030549
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0302472
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0298468
FRMD4A FERM domain containing 4A -0.0297347
HAND2 heart and neural crest derivatives expressed 2 -0.0297344
GREM2 gremlin 2, DAN family BMP antagonist -0.0296126
TCF12 transcription factor 12 -0.029332
RAD21 RAD21 homolog (S. pombe) -0.0292807
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0292557
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0286509
GPATCH8 G patch domain containing 8 -0.0281131
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0278425
GNAS GNAS complex locus -0.0277098
RPL35A ribosomal protein L35a -0.0274578
RBMX RNA binding motif protein, X-linked -0.0269936
PDZRN3 PDZ domain containing ring finger 3 -0.0266119
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0264319
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0260101
IER3 immediate early response 3 -0.0259298
MAPK10 mitogen-activated protein kinase 10 -0.0257367
H3-3B H3.3 histone B -0.025484
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0252274
MAML2 mastermind-like 2 (Drosophila) -0.0250154
NREP neuronal regeneration related protein -0.024746
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0245939
TMSB10 thymosin beta 10 -0.0245678
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.024522
DNAH14 dynein, axonemal, heavy chain 14 -0.0244281
RPL32 ribosomal protein L32 -0.0243455
SCG2 secretogranin II -0.0242241
THBS1 thrombospondin 1 -0.0240643
MAP1B microtubule-associated protein 1B -0.0239087
RABGAP1L RAB GTPase activating protein 1-like -0.0235356
PARD3 par-3 family cell polarity regulator -0.023255
USP34 ubiquitin specific peptidase 34 -0.0226736
RPL38 ribosomal protein L38 -0.0226708
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0226586
CUX1 cut-like homeobox 1 -0.0224451
PLAT plasminogen activator, tissue -0.0223843
DLC1 DLC1 Rho GTPase activating protein -0.021838
SAMD5 sterile alpha motif domain containing 5 -0.02183
KPNB1 karyopherin (importin) beta 1 -0.0218109
EXOC4 exocyst complex component 4 -0.0213968
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0212676
RAB7A RAB7A, member RAS oncogene family -0.0212335