NVP-BHG712_H4 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NVP-BHG712 perturbation in H4 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NVP-BHG712_H4 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.119134
IGFBP3 insulin-like growth factor binding protein 3 0.090409
NDRG1 N-myc downstream regulated 1 0.0832387
FTL ferritin, light polypeptide 0.0750152
LOC112694756 uncharaterized LOC112694756 0.0640614
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0619274
PABPC1 poly(A) binding protein, cytoplasmic 1 0.055476
FAM13A family with sequence similarity 13, member A 0.054057
HILPDA hypoxia inducible lipid droplet-associated 0.0478362
RTN4 reticulon 4 0.0456936
AKAP12 A kinase (PRKA) anchor protein 12 0.0441719
HELZ helicase with zinc finger 0.0428584
COL6A3 collagen, type VI, alpha 3 0.0421219
STC1 stanniocalcin 1 0.0419532
ERRFI1 ERBB receptor feedback inhibitor 1 0.0384135
EEF2 eukaryotic translation elongation factor 2 0.0380312
DDIT4 DNA-damage-inducible transcript 4 0.0350019
TRA2A transformer 2 alpha homolog (Drosophila) 0.0337214
YBX1 Y box binding protein 1 0.0330151
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.032949
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0317751
JUN jun proto-oncogene 0.0312611
LDHA lactate dehydrogenase A 0.0301751
CANX calnexin 0.0292613
GOLGA4 golgin A4 0.0289867
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0284719
RACK1 receptor for activated C kinase 1 0.0283513
ANXA2 annexin A2 0.0269021
TPM3 tropomyosin 3 0.0265154
RPL3 ribosomal protein L3 0.0263874
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0260271
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0260092
UBA6 ubiquitin-like modifier activating enzyme 6 0.0259359
ATP13A3 ATPase type 13A3 0.0256404
SRP54 signal recognition particle 54kDa 0.0256063
MYH9 myosin, heavy chain 9, non-muscle 0.025489
RNMT RNA (guanine-7-) methyltransferase 0.0252793
NAMPT nicotinamide phosphoribosyltransferase 0.0251213
CXCL8 chemokine (C-X-C motif) ligand 8 0.0249739
SNX13 sorting nexin 13 0.0245341
RPS19 ribosomal protein S19 0.02443
PLEC plectin 0.0241553
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0235975
PDIA3 protein disulfide isomerase family A, member 3 0.0234109
FTH1 ferritin, heavy polypeptide 1 0.0233469
ZNF841 zinc finger protein 841 0.0232748
TXNIP thioredoxin interacting protein 0.0232736
EIF4H eukaryotic translation initiation factor 4H 0.0227065
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.022554
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0225507
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0223924
HSPA8 heat shock 70kDa protein 8 0.0222136
WWTR1 WW domain containing transcription regulator 1 0.0221141
FLNA filamin A, alpha 0.0220546
MATR3 matrin 3 0.0219906
MON2 MON2 homolog (S. cerevisiae) 0.021878
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0217752
HYOU1 hypoxia up-regulated 1 0.0217359
SMAD3 SMAD family member 3 0.0217002
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0216321
ADM adrenomedullin 0.0214701
FXR1 fragile X mental retardation, autosomal homolog 1 0.0212965
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0212964
KTN1 kinectin 1 (kinesin receptor) 0.0208351
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 0.0207959
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0205421
GARS1 glycyl-tRNA synthetase 1 0.0205382
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0204505
CLTC clathrin, heavy chain (Hc) 0.0204454
USP3 ubiquitin specific peptidase 3 0.0200484
ELL2 elongation factor, RNA polymerase II, 2 0.0199395
GNPDA1 glucosamine-6-phosphate deaminase 1 0.019778
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0196537
TFG TRK-fused gene 0.0195235
MXI1 MAX interactor 1, dimerization protein 0.019448
OGA O-GlcNAcase 0.0193609
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0193608
GLS2 glutaminase 2 (liver, mitochondrial) 0.0193026
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0192734
MIDEAS mitotic deacetylase associated SANT domain protein 0.0192413
TNNC1 troponin C type 1 (slow) 0.0191722
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0191199
RPS2 ribosomal protein S2 0.0190709
PCBP2 poly(rC) binding protein 2 0.0190657
COPA coatomer protein complex, subunit alpha 0.0190279
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3 0.0189548
SEC23A Sec23 homolog A (S. cerevisiae) 0.018807
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.018623
BRD2 bromodomain containing 2 0.0185366
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0184182
RPS3 ribosomal protein S3 0.0180587
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0180563
TLN1 talin 1 0.0178401
SON SON DNA binding protein 0.0177701
ZNF148 zinc finger protein 148 0.0176236
HDAC9 histone deacetylase 9 0.0174355
FNIP1 folliculin interacting protein 1 0.0174311
VEGFA vascular endothelial growth factor A 0.0173826
SUCO SUN domain containing ossification factor 0.0173312
AFF4 AF4/FMR2 family, member 4 0.0169317

decreased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific -0.0990086
PTMA prothymosin, alpha -0.0976356
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0915813
FN1 fibronectin 1 -0.0871733
TMSB10 thymosin beta 10 -0.0811381
NALF1 NALCN channel auxiliary factor 1 -0.0793622
HLA-B major histocompatibility complex, class I, B -0.0781267
NLGN1 neuroligin 1 -0.07382
TPT1 tumor protein, translationally-controlled 1 -0.0735947
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.062201
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0512408
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.047055
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0421884
TPM4 tropomyosin 4 -0.0413674
VIM vimentin -0.0385977
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0385742
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0384579
WSB1 WD repeat and SOCS box containing 1 -0.03827
IGFBP5 insulin-like growth factor binding protein 5 -0.0352951
PSD3 pleckstrin and Sec7 domain containing 3 -0.0337843
NAV1 neuron navigator 1 -0.0328066
IGF2 insulin-like growth factor 2 -0.0316366
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0307709
RPS13 ribosomal protein S13 -0.0301345
ENO2 enolase 2 (gamma, neuronal) -0.0298861
EXT1 exostosin glycosyltransferase 1 -0.0297636
RPS25 ribosomal protein S25 -0.029503
TNS3 tensin 3 -0.029345
CALD1 caldesmon 1 -0.0288342
SCLT1 sodium channel and clathrin linker 1 -0.0279025
RPL38 ribosomal protein L38 -0.027364
PTPRG protein tyrosine phosphatase, receptor type, G -0.0271131
ZBTB20 zinc finger and BTB domain containing 20 -0.0265716
RPS23 ribosomal protein S23 -0.0265652
FAF1 Fas (TNFRSF6) associated factor 1 -0.0265281
ZMYND8 zinc finger, MYND-type containing 8 -0.0264025
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0263962
MT2A metallothionein 2A -0.0262795
ACTG1 actin gamma 1 -0.0261284
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0255003
NAV3 neuron navigator 3 -0.0251985
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0249073
RPL35A ribosomal protein L35a -0.0248948
LAMB3 laminin, beta 3 -0.0241078
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.02384
ATXN1 ataxin 1 -0.0235807
FBXO11 F-box protein 11 -0.0234787
SDK1 sidekick cell adhesion molecule 1 -0.0233189
PRSS23 protease, serine, 23 -0.0231163
S100A10 S100 calcium binding protein A10 -0.0230669
DGKI diacylglycerol kinase, iota -0.023
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0225532
RPL7A ribosomal protein L7a -0.0221851
PTPRK protein tyrosine phosphatase, receptor type, K -0.0220155
HLA-A major histocompatibility complex, class I, A -0.021749
CKAP4 cytoskeleton-associated protein 4 -0.0216985
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0216795
ZNF804A zinc finger protein 804A -0.021327
CD44 CD44 molecule (Indian blood group) -0.0208135
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0207363
RPLP2 ribosomal protein, large, P2 -0.0206419
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0206406
EFNA5 ephrin-A5 -0.020352
PLAUR plasminogen activator, urokinase receptor -0.0202558
SMC4 structural maintenance of chromosomes 4 -0.0200867
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0200068
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0199958
PXDN peroxidasin -0.0199465
HIPK2 homeodomain interacting protein kinase 2 -0.0199232
RPL9 ribosomal protein L9 -0.0199159
RAN RAN, member RAS oncogene family -0.0198956
IFIH1 interferon induced with helicase C domain 1 -0.0198421
GLIS3 GLIS family zinc finger 3 -0.0197505
RPS24 ribosomal protein S24 -0.0197216
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0196385
AEBP2 AE binding protein 2 -0.0195583
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.019491
SP100 SP100 nuclear antigen -0.0194739
SLC25A51 solute carrier family 25, member 51 -0.0194664
CAVIN1 caveolae associated protein 1 -0.0194508
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0194494
RPL37A ribosomal protein L37a -0.0192676
ANTXR2 anthrax toxin receptor 2 -0.0191342
EGFR epidermal growth factor receptor -0.0191091
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0190997
GRB10 growth factor receptor-bound protein 10 -0.0190451
CDK13 cyclin-dependent kinase 13 -0.0187978
SYT1 synaptotagmin I -0.0186708
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 -0.0185703
SEPTIN9 septin 9 -0.0185658
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0180996
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0180598
PGK1 phosphoglycerate kinase 1 -0.0179613
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 -0.0178829
CARS1 cysteinyl-tRNA synthetase 1 -0.0178358
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0177819
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0176376
MAP4 microtubule-associated protein 4 -0.0174115
MKI67 marker of proliferation Ki-67 -0.0173772
RPS29 ribosomal protein S29 -0.0173542