NVP-BHG712_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NVP-BHG712 perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NVP-BHG712_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.470725
FN1 fibronectin 1 0.175165
AKAP12 A kinase (PRKA) anchor protein 12 0.16819
ERRFI1 ERBB receptor feedback inhibitor 1 0.116826
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.092324
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.08707
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0763458
C3 complement component 3 0.0760005
ENO1 enolase 1, (alpha) 0.0660741
APOB apolipoprotein B 0.0620932
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0549953
FAT1 FAT atypical cadherin 1 0.0511362
TF transferrin 0.0485646
DSPP dentin sialophosphoprotein 0.047889
PEG3 paternally expressed 3 0.0425915
SLC38A2 solute carrier family 38, member 2 0.0421946
NKD1 naked cuticle homolog 1 (Drosophila) 0.0416403
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0402613
CCL20 chemokine (C-C motif) ligand 20 0.0394547
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0380414
TPM4 tropomyosin 4 0.037714
LOC112694756 uncharaterized LOC112694756 0.037343
SVIL supervillin 0.0373236
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0354586
GPC3 glypican 3 0.0352646
MYH9 myosin, heavy chain 9, non-muscle 0.0344195
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0342632
PAWR PRKC, apoptosis, WT1, regulator 0.0338679
AHSG alpha-2-HS-glycoprotein 0.0333409
CTSB cathepsin B 0.0331651
DLC1 DLC1 Rho GTPase activating protein 0.0326552
SAMD4A sterile alpha motif domain containing 4A 0.032396
TMEM123 transmembrane protein 123 0.0323942
FOXP1 forkhead box P1 0.0321919
PDLIM5 PDZ and LIM domain 5 0.0320411
GPC6 glypican 6 0.0317668
IGFBP1 insulin-like growth factor binding protein 1 0.0302568
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0299703
TPT1 tumor protein, translationally-controlled 1 0.0296708
BCL2L1 BCL2-like 1 0.029379
MAML2 mastermind-like 2 (Drosophila) 0.0292509
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0286077
FRMD5 FERM domain containing 5 0.0285482
EHBP1 EH domain binding protein 1 0.0277583
UBC ubiquitin C 0.0273584
A2M alpha-2-macroglobulin 0.0273256
SMAD3 SMAD family member 3 0.0271911
TM4SF1 transmembrane 4 L six family member 1 0.0270121
MCL1 myeloid cell leukemia 1 0.0269442
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0268165
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0263907
ITGAV integrin, alpha V 0.0261005
ARL5B ADP-ribosylation factor-like 5B 0.0254248
EXT1 exostosin glycosyltransferase 1 0.025156
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0245205
ATXN1 ataxin 1 0.0241136
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0241024
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0236923
EEF2 eukaryotic translation elongation factor 2 0.0236197
LIMS1 LIM and senescent cell antigen-like domains 1 0.0235875
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0230495
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0227323
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0226034
ARHGAP9 Rho GTPase activating protein 9 0.0224949
APLP2 amyloid beta (A4) precursor-like protein 2 0.0222616
GRB10 growth factor receptor-bound protein 10 0.0221433
VCL vinculin 0.0220202
IGF1R insulin-like growth factor 1 receptor 0.0217958
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0215435
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0214372
PPARD peroxisome proliferator-activated receptor delta 0.021417
ITGB5 integrin, beta 5 0.0213018
ZFAND3 zinc finger, AN1-type domain 3 0.0212479
EGR1 early growth response 1 0.0212377
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0212287
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0212129
CANX calnexin 0.0211367
AFF1 AF4/FMR2 family, member 1 0.0208759
NRIP1 nuclear receptor interacting protein 1 0.0205015
ZBTB38 zinc finger and BTB domain containing 38 0.0204155
CPE carboxypeptidase E 0.0203922
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0203666
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0201486
FNDC3B fibronectin type III domain containing 3B 0.0200978
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0196102
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0190459
ARHGEF18 Rho/Rac guanine nucleotide exchange factor (GEF) 18 0.0190384
RAB3B RAB3B, member RAS oncogene family 0.0189489
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0189396
NPAS2 neuronal PAS domain protein 2 0.0188874
PLEC plectin 0.0187105
MYO1E myosin IE 0.0186173
RPL3 ribosomal protein L3 0.01841
LCOR ligand dependent nuclear receptor corepressor 0.0184005
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0181479
SFTPA2 surfactant protein A2 0.0179486
KYNU kynureninase 0.0179201
GMDS GDP-mannose 4,6-dehydratase 0.017844
BCAR3 breast cancer anti-estrogen resistance 3 0.0177404
CFB complement factor B 0.0174782

decreased expression

Symbol Name Standardized Value
RBM39 RNA binding motif protein 39 -0.0312685
MT2A metallothionein 2A -0.0244933
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0229736
DTNA dystrobrevin, alpha -0.0214606
FTL ferritin, light polypeptide -0.0176637
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0175772
CCNL1 cyclin L1 -0.0172426
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0170714
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0170685
RBM25 RNA binding motif protein 25 -0.0164784
FBXO11 F-box protein 11 -0.0152575
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0148986
PTK2 protein tyrosine kinase 2 -0.0148367
FAM13A family with sequence similarity 13, member A -0.0148171
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0146088
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0145856
RPL37A ribosomal protein L37a -0.0140188
PUM2 pumilio RNA-binding family member 2 -0.0137119
VEGFA vascular endothelial growth factor A -0.0133269
PNISR PNN-interacting serine/arginine-rich protein -0.0124702
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0124401
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0123154
KDM3A lysine (K)-specific demethylase 3A -0.0120693
COLEC11 collectin sub-family member 11 -0.0116969
CDC7 cell division cycle 7 -0.011674
DHFR dihydrofolate reductase -0.0116257
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0115685
ARHGAP26 Rho GTPase activating protein 26 -0.0112852
RNF145 ring finger protein 145 -0.0110419
RRBP1 ribosome binding protein 1 -0.010733
PPIG peptidylprolyl isomerase G (cyclophilin G) -0.0106039
ESYT2 extended synaptotagmin-like protein 2 -0.0105794
WSB1 WD repeat and SOCS box containing 1 -0.0104954
TNRC6A trinucleotide repeat containing 6A -0.0104674
MED13L mediator complex subunit 13-like -0.0104108
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0103723
PDS5B PDS5 cohesin associated factor B -0.0103609
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0103315
SHOC2 soc-2 suppressor of clear homolog (C. elegans) -0.0101797
CCAR1 cell division cycle and apoptosis regulator 1 -0.0100567
CSNK1A1 casein kinase 1, alpha 1 -0.0100448
HELZ helicase with zinc finger -0.00996772
UBE3A ubiquitin protein ligase E3A -0.00993057
COPA coatomer protein complex, subunit alpha -0.00968152
ZNF292 zinc finger protein 292 -0.0095806
PDE8A phosphodiesterase 8A -0.00948461
TRPM7 transient receptor potential cation channel, subfamily M, member 7 -0.00940618
NF1 neurofibromin 1 -0.00936773
BRWD1 bromodomain and WD repeat domain containing 1 -0.00933907
NIPBL Nipped-B homolog (Drosophila) -0.00932922
SOS1 son of sevenless homolog 1 (Drosophila) -0.00927693
BRD4 bromodomain containing 4 -0.00924125
EP400 E1A binding protein p400 -0.00921228
NDRG1 N-myc downstream regulated 1 -0.00916827
PRRC2C proline-rich coiled-coil 2C -0.00912795
TBCK TBC1 domain containing kinase -0.00893621
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 -0.00892673
PPHLN1 periphilin 1 -0.00892612
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.00886439
PPME1 protein phosphatase methylesterase 1 -0.00886099
MT1X metallothionein 1X -0.00879272
MBD5 methyl-CpG binding domain protein 5 -0.00872265
KDM6A lysine (K)-specific demethylase 6A -0.00869226
DUSP6 dual specificity phosphatase 6 -0.00868939
NPEPPS aminopeptidase puromycin sensitive -0.00867095
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.00862275
PRPF4B pre-mRNA processing factor 4B -0.00859621
KMT2E lysine (K)-specific methyltransferase 2E -0.00858148
TUT4 terminal uridylyl transferase 4 -0.00857967
HSPH1 heat shock 105kDa/110kDa protein 1 -0.00851332
EZR ezrin -0.00834814
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0082769
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.00826385
RPS3 ribosomal protein S3 -0.0082104
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.00820154
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.00813569
TTC21B tetratricopeptide repeat domain 21B -0.00809414
GOLGA4 golgin A4 -0.0080879
IARS1 isoleucyl-tRNA synthetase 1 -0.00806705
UTRN utrophin -0.00803236
ARID4B AT rich interactive domain 4B (RBP1-like) -0.00800945
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.00797449
HSPG2 heparan sulfate proteoglycan 2 -0.00795197
OGA O-GlcNAcase -0.00793038
BIRC6 baculoviral IAP repeat containing 6 -0.00787925
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.00786588
PCF11 PCF11 cleavage and polyadenylation factor subunit -0.00784078
CAMKMT calmodulin-lysine N-methyltransferase -0.00782979
SRRM2 serine/arginine repetitive matrix 2 -0.00782241
HMBOX1 homeobox containing 1 -0.00777685
PTPRG protein tyrosine phosphatase, receptor type, G -0.00777259
DYM dymeclin -0.00770578
ARHGAP12 Rho GTPase activating protein 12 -0.0076202
SMC6 structural maintenance of chromosomes 6 -0.00755657
FCHSD2 FCH and double SH3 domains 2 -0.00751424
PSPC1 paraspeckle component 1 -0.00749408
CNOT8 CCR4-NOT transcription complex, subunit 8 -0.00740503
RSRC2 arginine/serine-rich coiled-coil 2 -0.00737769
SRRM1 serine/arginine repetitive matrix 1 -0.00736176
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.00733687