NVP-BHG712_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NVP-BHG712 perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NVP-BHG712_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin 0.0815402
PALM2AKAP2 PALM2 and AKAP2 fusion 0.062534
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0613634
HLA-B major histocompatibility complex, class I, B 0.0608783
PSD3 pleckstrin and Sec7 domain containing 3 0.0607956
CDH13 cadherin 13 0.05404
ASPH aspartate beta-hydroxylase 0.0501808
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0489868
ANXA2 annexin A2 0.0472882
TMEM178B transmembrane protein 178B 0.0459519
HLA-A major histocompatibility complex, class I, A 0.0453176
NRP1 neuropilin 1 0.0433204
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0425183
APCDD1L adenomatosis polyposis coli down-regulated 1-like 0.0410867
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0402286
IGFBP3 insulin-like growth factor binding protein 3 0.0393929
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0386877
COL1A2 collagen, type I, alpha 2 0.0379665
TGFBI transforming growth factor, beta-induced, 68kDa 0.0379035
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0372439
HDAC9 histone deacetylase 9 0.036494
LOXL2 lysyl oxidase-like 2 0.0362289
NAV1 neuron navigator 1 0.0361914
SP100 SP100 nuclear antigen 0.034767
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0341694
DST dystonin 0.0334427
COL5A1 collagen, type V, alpha 1 0.0325505
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0321974
AKAP12 A kinase (PRKA) anchor protein 12 0.0316697
FHIT fragile histidine triad 0.0312998
ECE1 endothelin converting enzyme 1 0.0303553
ANGPTL4 angiopoietin-like 4 0.0301154
ZBTB38 zinc finger and BTB domain containing 38 0.0294133
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0292782
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0290776
TPM1 tropomyosin 1 (alpha) 0.028904
CTSB cathepsin B 0.0288622
SMYD3 SET and MYND domain containing 3 0.0283895
FRMD4A FERM domain containing 4A 0.0282679
PLEC plectin 0.0281799
MTSS1 metastasis suppressor 1 0.027893
VEGFA vascular endothelial growth factor A 0.0278557
HMGA2 high mobility group AT-hook 2 0.0275961
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0272973
WWTR1 WW domain containing transcription regulator 1 0.0270782
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0267686
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0265447
RPL35A ribosomal protein L35a 0.0264206
GLIS3 GLIS family zinc finger 3 0.0263766
HLA-C major histocompatibility complex, class I, C 0.0250463
SLIT2 slit homolog 2 (Drosophila) 0.0248543
COL5A3 collagen, type V, alpha 3 0.0248433
SVIL supervillin 0.0247551
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0245492
LOC112694756 uncharaterized LOC112694756 0.0243735
EXT1 exostosin glycosyltransferase 1 0.0241794
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0238463
HPCAL1 hippocalcin-like 1 0.0231497
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0231453
ACTG1 actin gamma 1 0.0230227
RNF213 ring finger protein 213 0.0230007
LRMDA leucine rich melanocyte differentiation associated 0.0229154
ITGA1 integrin, alpha 1 0.0227998
PDLIM5 PDZ and LIM domain 5 0.0227733
NRIP1 nuclear receptor interacting protein 1 0.0226985
SLFN5 schlafen family member 5 0.0226187
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0224538
SMAD3 SMAD family member 3 0.0220141
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0217685
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0212577
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0205524
IFI6 interferon, alpha-inducible protein 6 0.0202385
PLAT plasminogen activator, tissue 0.0202303
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0196773
COL6A1 collagen, type VI, alpha 1 0.0196103
BICD1 bicaudal D homolog 1 (Drosophila) 0.0195349
PTPRE protein tyrosine phosphatase, receptor type, E 0.0194803
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.019366
C1S complement component 1, s subcomponent 0.0185387
FBN1 fibrillin 1 0.018418
LPP LIM domain containing preferred translocation partner in lipoma 0.0182326
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0181902
FBXL7 F-box and leucine-rich repeat protein 7 0.0181307
EGFR epidermal growth factor receptor 0.0181029
INTS6 integrator complex subunit 6 0.0180493
RPL37A ribosomal protein L37a 0.0177084
EGR1 early growth response 1 0.0171094
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0170469
MACF1 microtubule-actin crosslinking factor 1 0.0169199
ZBTB20 zinc finger and BTB domain containing 20 0.0168909
IGFBP7 insulin-like growth factor binding protein 7 0.0167861
ZSWIM6 zinc finger, SWIM-type containing 6 0.0167803
UTRN utrophin 0.0166642
NPAS2 neuronal PAS domain protein 2 0.0166125
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0163844
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0163742
HLA-E major histocompatibility complex, class I, E 0.0162587
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0162455
COL4A2 collagen, type IV, alpha 2 0.0162442
RALY RALY heterogeneous nuclear ribonucleoprotein 0.016233

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.149393
VIM vimentin -0.142539
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.114557
ZNF292 zinc finger protein 292 -0.0673643
MT2A metallothionein 2A -0.0658167
FNDC3B fibronectin type III domain containing 3B -0.0647175
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0617504
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0615099
PGK1 phosphoglycerate kinase 1 -0.0604514
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.059058
GOLGA4 golgin A4 -0.0583683
NAMPT nicotinamide phosphoribosyltransferase -0.0562287
RBM39 RNA binding motif protein 39 -0.0554869
CENPF centromere protein F, 350/400kDa -0.0541644
UBC ubiquitin C -0.0487395
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0482658
STC1 stanniocalcin 1 -0.0479718
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0465436
PTMA prothymosin, alpha -0.0447372
FN1 fibronectin 1 -0.0395327
TPX2 TPX2, microtubule-associated -0.0376404
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0365154
SMC4 structural maintenance of chromosomes 4 -0.0361496
H1-0 H1.0 linker histone -0.0361022
SETD5 SET domain containing 5 -0.0347855
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.034574
RAD21 RAD21 homolog (S. pombe) -0.0330145
KDM3A lysine (K)-specific demethylase 3A -0.0323011
ANLN anillin, actin binding protein -0.0319458
GARS1 glycyl-tRNA synthetase 1 -0.0314332
POTEF POTE ankyrin domain family, member F -0.0308956
PKM pyruvate kinase, muscle -0.0307525
THBS1 thrombospondin 1 -0.030396
FKBP1A FK506 binding protein 1A, 12kDa -0.0302335
XPO1 exportin 1 -0.0299789
MKI67 marker of proliferation Ki-67 -0.0299748
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.029755
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0294915
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0293395
CALU calumenin -0.0292961
HMGB2 high mobility group box 2 -0.0292718
TFG TRK-fused gene -0.0291205
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0285546
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0269022
KMT2E lysine (K)-specific methyltransferase 2E -0.0265061
ELL2 elongation factor, RNA polymerase II, 2 -0.0264456
SEPTIN7 septin 7 -0.0262826
BRWD3 bromodomain and WD repeat domain containing 3 -0.0261213
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0260997
RAB1A RAB1A, member RAS oncogene family -0.026046
COPA coatomer protein complex, subunit alpha -0.0257397
DSCAM Down syndrome cell adhesion molecule -0.0256392
NDRG1 N-myc downstream regulated 1 -0.0250913
DIAPH3 diaphanous-related formin 3 -0.0250837
RTN4 reticulon 4 -0.0247236
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0246319
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.024557
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0243212
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0239049
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0229756
SRP54 signal recognition particle 54kDa -0.0228961
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.022688
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0226615
EYA1 EYA transcriptional coactivator and phosphatase 1 -0.0224875
OGA O-GlcNAcase -0.0224065
QKI QKI, KH domain containing, RNA binding -0.0220986
CCNL1 cyclin L1 -0.0218205
SOD2 superoxide dismutase 2, mitochondrial -0.0218072
MCTP2 multiple C2 domains, transmembrane 2 -0.0215236
SPAG9 sperm associated antigen 9 -0.0214775
RNF24 ring finger protein 24 -0.0214092
CANX calnexin -0.0212166
SUCO SUN domain containing ossification factor -0.021097
SEPTIN2 septin 2 -0.021092
LCORL ligand dependent nuclear receptor corepressor-like -0.0210127
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0209032
CENPE centromere protein E, 312kDa -0.0208477
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0208326
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0206933
TRA2A transformer 2 alpha homolog (Drosophila) -0.0206244
RNMT RNA (guanine-7-) methyltransferase -0.0204739
DLG1 discs, large homolog 1 (Drosophila) -0.0204228
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0203285
SEC24D SEC24 family member D -0.0203123
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0202071
MORF4L1 mortality factor 4 like 1 -0.0201582
LMAN1 lectin, mannose-binding, 1 -0.0201337
IER3 immediate early response 3 -0.0200345
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.019895
HELZ helicase with zinc finger -0.0197435
ATP13A3 ATPase type 13A3 -0.0195131
SBF2 SET binding factor 2 -0.0194792
RLF rearranged L-myc fusion -0.0193578
KDM5B lysine (K)-specific demethylase 5B -0.0193383
PHIP pleckstrin homology domain interacting protein -0.0193336
IFI16 interferon, gamma-inducible protein 16 -0.0193294
ECT2 epithelial cell transforming 2 -0.0191727
ZNF654 zinc finger protein 654 -0.0190665
KIF4A kinesin family member 4A -0.0189171
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0187118