NVP-BHG712_SHP-77 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description NVP-BHG712 perturbation in SHP-77 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the NVP-BHG712_SHP-77 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE10A phosphodiesterase 10A 0.243545
VGF VGF nerve growth factor inducible 0.174991
SNAP25 synaptosomal-associated protein, 25kDa 0.166054
SMOC1 SPARC related modular calcium binding 1 0.121674
MCL1 myeloid cell leukemia 1 0.0914151
MYH9 myosin, heavy chain 9, non-muscle 0.0802482
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.070507
CPE carboxypeptidase E 0.0637344
INHBA inhibin, beta A 0.0591679
LOC112694756 uncharaterized LOC112694756 0.0565413
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0504378
FNDC3A fibronectin type III domain containing 3A 0.0475952
MPRIP myosin phosphatase Rho interacting protein 0.0472073
CENPF centromere protein F, 350/400kDa 0.0426294
EEF2 eukaryotic translation elongation factor 2 0.0424694
FAT1 FAT atypical cadherin 1 0.0417537
ARHGAP26 Rho GTPase activating protein 26 0.0384115
TENT5A terminal nucleotidyltransferase 5A 0.0381602
AP1S3 adaptor-related protein complex 1, sigma 3 subunit 0.0364782
SIK2 salt-inducible kinase 2 0.0364112
UBE2QL1 ubiquitin-conjugating enzyme E2Q family-like 1 0.0336152
TOP1 topoisomerase (DNA) I 0.0335902
EGR1 early growth response 1 0.0334629
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0334382
RPL3 ribosomal protein L3 0.0326294
PCSK1 proprotein convertase subtilisin/kexin type 1 0.0318061
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2 0.0292414
TPM4 tropomyosin 4 0.0286662
NUMA1 nuclear mitotic apparatus protein 1 0.0282434
TRAPPC9 trafficking protein particle complex 9 0.0279135
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0277158
ANKH ANKH inorganic pyrophosphate transport regulator 0.0274912
CAMTA1 calmodulin binding transcription activator 1 0.027133
MATR3 matrin 3 0.0266618
GRAMD4 GRAM domain containing 4 0.0266048
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0265963
DACH1 dachshund family transcription factor 1 0.0263964
AHR aryl hydrocarbon receptor 0.0256414
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0252143
SURF4 surfeit 4 0.0251774
POTEF POTE ankyrin domain family, member F 0.0247343
DGKD diacylglycerol kinase, delta 130kDa 0.0242255
IRS2 insulin receptor substrate 2 0.02418
TPM3 tropomyosin 3 0.0241352
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.024129
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0241215
MSN moesin 0.023706
STK24 serine/threonine kinase 24 0.0232447
VAV2 vav 2 guanine nucleotide exchange factor 0.0225749
PRRC2A proline-rich coiled-coil 2A 0.0221936
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0214609
MEF2D myocyte enhancer factor 2D 0.0211087
TXNRD1 thioredoxin reductase 1 0.0210221
PALLD palladin, cytoskeletal associated protein 0.020983
DUSP4 dual specificity phosphatase 4 0.020937
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0209142
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0208641
HMGB3 high mobility group box 3 0.0205738
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.0205387
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0205221
HSPA8 heat shock 70kDa protein 8 0.0203147
TNRC18 trinucleotide repeat containing 18 0.0198175
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.0196091
CCT2 chaperonin containing TCP1, subunit 2 (beta) 0.0194098
TMEM255B transmembrane protein 255B 0.0191646
LPP LIM domain containing preferred translocation partner in lipoma 0.0190171
CHST8 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 0.0189395
APLP2 amyloid beta (A4) precursor-like protein 2 0.0188492
AGO2 argonaute RISC catalytic component 2 0.018841
BCLAF1 BCL2-associated transcription factor 1 0.0187682
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0184464
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0184148
SGMS2 sphingomyelin synthase 2 0.0184095
CDH12 cadherin 12, type 2 (N-cadherin 2) 0.0183368
IGF1R insulin-like growth factor 1 receptor 0.0183143
ZNF146 zinc finger protein 146 0.0180636
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0180185
TUBB tubulin, beta class I 0.0179819
GPRIN3 GPRIN family member 3 0.0179049
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0177686
SYT13 synaptotagmin XIII 0.0176147
SFMBT2 Scm-like with four mbt domains 2 0.0175715
PDLIM5 PDZ and LIM domain 5 0.0175657
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0175556
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0173789
GRK5 G protein-coupled receptor kinase 5 0.0172831
CEMIP cell migration inducing protein, hyaluronan binding 0.0172411
PPP2R1B protein phosphatase 2, regulatory subunit A, beta 0.0171594
EGFR epidermal growth factor receptor 0.0168439
FAM120A family with sequence similarity 120A 0.0164625
FBXO41 F-box protein 41 0.0162725
CAPRIN1 cell cycle associated protein 1 0.0161762
SMAD4 SMAD family member 4 0.0161397
AOPEP aminopeptidase O (putative) 0.0161371
OSBPL8 oxysterol binding protein-like 8 0.0160906
BRD4 bromodomain containing 4 0.0160348
THSD7A thrombospondin, type I, domain containing 7A 0.0156845
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0156725
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0156237
CDK5RAP2 CDK5 regulatory subunit associated protein 2 0.0154984

decreased expression

Symbol Name Standardized Value
NRG1 neuregulin 1 -0.227714
IGFBP5 insulin-like growth factor binding protein 5 -0.14134
NALF1 NALCN channel auxiliary factor 1 -0.139998
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.119906
ESRRG estrogen-related receptor gamma -0.115841
GPC6 glypican 6 -0.0985581
TENM1 teneurin transmembrane protein 1 -0.0936057
RIMS2 regulating synaptic membrane exocytosis 2 -0.0708653
KCNB2 potassium channel, voltage gated Shab related subfamily B, member 2 -0.0701678
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0678911
RORA RAR-related orphan receptor A -0.0638666
SNTG1 syntrophin, gamma 1 -0.0635728
ACTG1 actin gamma 1 -0.0578987
PTMA prothymosin, alpha -0.0574311
TSHZ2 teashirt zinc finger homeobox 2 -0.0559931
SCG2 secretogranin II -0.0553775
NKAIN2 Na+/K+ transporting ATPase interacting 2 -0.0545249
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0526258
NDRG1 N-myc downstream regulated 1 -0.0517526
GPC5 glypican 5 -0.0502593
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit -0.0484263
WSB1 WD repeat and SOCS box containing 1 -0.0477423
NCKAP5 NCK-associated protein 5 -0.0461988
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2 -0.0451086
CANX calnexin -0.0450014
IGFBP2 insulin-like growth factor binding protein 2, 36kDa -0.0440476
NELL1 NEL-like 1 (chicken) -0.0440219
ZBTB20 zinc finger and BTB domain containing 20 -0.043554
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) -0.0433767
PGK1 phosphoglycerate kinase 1 -0.0430064
KCNJ6 potassium channel, inwardly rectifying subfamily J, member 6 -0.0423922
ENO1 enolase 1, (alpha) -0.0420761
SMYD3 SET and MYND domain containing 3 -0.0417427
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0409
LSAMP limbic system-associated membrane protein -0.0396827
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0396694
TMSB4X thymosin beta 4, X-linked -0.0391666
PEG10 paternally expressed 10 -0.0382985
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0373493
DTNA dystrobrevin, alpha -0.0367531
CNTNAP2 contactin associated protein-like 2 -0.0364587
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0363093
NLGN1 neuroligin 1 -0.0356397
KCNMB3 potassium channel subfamily M regulatory beta subunit 3 -0.0343062
SSR2 signal sequence receptor, beta (translocon-associated protein beta) -0.0337094
MCTP1 multiple C2 domains, transmembrane 1 -0.0336449
MYT1L myelin transcription factor 1-like -0.0332348
AGBL4 ATP/GTP binding protein-like 4 -0.0331499
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0331095
PTCHD4 patched domain containing 4 -0.0315845
TRA2A transformer 2 alpha homolog (Drosophila) -0.0314927
ZMYM2 zinc finger, MYM-type 2 -0.0295813
RAD51B RAD51 paralog B -0.0292615
SYT1 synaptotagmin I -0.0284818
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0281385
ZSWIM5 zinc finger, SWIM-type containing 5 -0.0274604
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0271437
TTC3 tetratricopeptide repeat domain 3 -0.0269443
GRB10 growth factor receptor-bound protein 10 -0.0268597
MT2A metallothionein 2A -0.0268003
SEZ6L2 seizure related 6 homolog (mouse)-like 2 -0.0267765
H1-0 H1.0 linker histone -0.026745
LRFN2 leucine rich repeat and fibronectin type III domain containing 2 -0.0265763
STC1 stanniocalcin 1 -0.0259264
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0256339
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 -0.0256063
GPATCH8 G patch domain containing 8 -0.0254897
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0251489
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0250702
NAV1 neuron navigator 1 -0.0249434
PCDH9 protocadherin 9 -0.0247808
S100A9 S100 calcium binding protein A9 -0.0244789
ZBTB7C zinc finger and BTB domain containing 7C -0.0243052
GOLGB1 golgin B1 -0.0240756
EXOC4 exocyst complex component 4 -0.0238485
ZNF804A zinc finger protein 804A -0.0236643
FTL ferritin, light polypeptide -0.0235611
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0234261
SRP72 signal recognition particle 72kDa -0.023408
JAM3 junctional adhesion molecule 3 -0.0232989
NIPBL Nipped-B homolog (Drosophila) -0.0231938
PDIA3 protein disulfide isomerase family A, member 3 -0.0226853
ANKRD12 ankyrin repeat domain 12 -0.0224619
AUTS2 autism susceptibility candidate 2 -0.022431
BCL2 B-cell CLL/lymphoma 2 -0.0223409
SQSTM1 sequestosome 1 -0.0218174
RAB7A RAB7A, member RAS oncogene family -0.0217977
KTN1 kinectin 1 (kinesin receptor) -0.0215857
ADGRL2 adhesion G protein-coupled receptor L2 -0.0214643
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.021402
CADM1 cell adhesion molecule 1 -0.0213508
FBXO34 F-box protein 34 -0.021341
KMT2A lysine (K)-specific methyltransferase 2A -0.021294
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) -0.0211491
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.021146
ZFAND3 zinc finger, AN1-type domain 3 -0.0211298
BPTF bromodomain PHD finger transcription factor -0.0209644
EYA2 EYA transcriptional coactivator and phosphatase 2 -0.0209168
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0208963
MTDH metadherin -0.0206763