Nafamostat (mesylate)_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Nafamostat (mesylate) perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Nafamostat (mesylate)_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NLGN1 neuroligin 1 0.109059
AKAP12 A kinase (PRKA) anchor protein 12 0.101123
RPL4 ribosomal protein L4 0.06087
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0487055
RPS3 ribosomal protein S3 0.0486618
RAD51B RAD51 paralog B 0.0435439
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0387988
CDH13 cadherin 13 0.0381797
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0380051
ZBTB20 zinc finger and BTB domain containing 20 0.0375854
HLA-A major histocompatibility complex, class I, A 0.0366493
EIF1 eukaryotic translation initiation factor 1 0.0355523
ANGPTL4 angiopoietin-like 4 0.0324163
RPS12 ribosomal protein S12 0.032156
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0317389
DHFR dihydrofolate reductase 0.0300652
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.0288574
RBM25 RNA binding motif protein 25 0.0284881
AKAP9 A kinase (PRKA) anchor protein 9 0.0277378
CENPF centromere protein F, 350/400kDa 0.0271731
SRRM2 serine/arginine repetitive matrix 2 0.026862
EIF4H eukaryotic translation initiation factor 4H 0.0267952
SET SET nuclear proto-oncogene 0.0266747
CBX3 chromobox homolog 3 0.0259477
RPS2 ribosomal protein S2 0.0245031
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0235481
HDAC9 histone deacetylase 9 0.0232296
PRRC2C proline-rich coiled-coil 2C 0.0230246
SPIDR scaffolding protein involved in DNA repair 0.0230028
USP53 ubiquitin specific peptidase 53 0.0222875
CADM1 cell adhesion molecule 1 0.0219481
ENO2 enolase 2 (gamma, neuronal) 0.0215857
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 0.0213656
IFI6 interferon, alpha-inducible protein 6 0.0213292
MACROD2 MACRO domain containing 2 0.0210537
PTMA prothymosin, alpha 0.020886
ENO1 enolase 1, (alpha) 0.0206988
ATF4 activating transcription factor 4 0.0205088
EFNA5 ephrin-A5 0.0200968
RPS18 ribosomal protein S18 0.0199498
MAML3 mastermind-like 3 (Drosophila) 0.0198507
LRMDA leucine rich melanocyte differentiation associated 0.0193807
RPS14 ribosomal protein S14 0.0192544
TPM3 tropomyosin 3 0.0190995
SRSF11 serine/arginine-rich splicing factor 11 0.019098
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0189207
HDAC4 histone deacetylase 4 0.018667
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0181303
TLN1 talin 1 0.0179333
MYO9A myosin IXA 0.0178082
SOX6 SRY (sex determining region Y)-box 6 0.0177702
OSBPL10 oxysterol binding protein-like 10 0.017696
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0176309
BRCA1 breast cancer 1, early onset 0.0175573
RNF130 ring finger protein 130 0.0174782
RBM6 RNA binding motif protein 6 0.0171318
HMGB2 high mobility group box 2 0.0169161
NFE2L1 nuclear factor, erythroid 2-like 1 0.0168225
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0162814
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0162529
RPL5 ribosomal protein L5 0.0161427
PTPN23 protein tyrosine phosphatase, non-receptor type 23 0.0160335
HMG20B high mobility group 20B 0.0159482
ANKZF1 ankyrin repeat and zinc finger domain containing 1 0.0158811
RPL26 ribosomal protein L26 0.0158721
RPL12 ribosomal protein L12 0.0158438
HMGN2 high mobility group nucleosomal binding domain 2 0.0158411
MKI67 marker of proliferation Ki-67 0.0158295
GRIK5 glutamate receptor, ionotropic, kainate 5 0.0158193
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0157024
ASPH aspartate beta-hydroxylase 0.0156046
EZR ezrin 0.0155957
CALD1 caldesmon 1 0.015582
SHISA5 shisa family member 5 0.0154511
PABPN1 poly(A) binding protein, nuclear 1 0.0153577
PHF14 PHD finger protein 14 0.0152039
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0152005
EIF5B eukaryotic translation initiation factor 5B 0.0151876
CFAP44 cilia and flagella associated protein 44 0.0148712
TGFA transforming growth factor, alpha 0.0147595
DYNC2I1 dynein 2 intermediate chain 1 0.0147362
PDE4D phosphodiesterase 4D, cAMP-specific 0.0146642
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0145323
DICER1 dicer 1, ribonuclease type III 0.0141934
EXOC4 exocyst complex component 4 0.0141553
CEP128 centrosomal protein 128kDa 0.0140518
RPL36 ribosomal protein L36 0.0140501
STXBP1 syntaxin binding protein 1 0.0138837
KDM5C lysine (K)-specific demethylase 5C 0.0138653
MAML2 mastermind-like 2 (Drosophila) 0.0136141
BOD1L1 biorientation of chromosomes in cell division 1-like 1 0.0135734
RPL27 ribosomal protein L27 0.0135657
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0133639
MAN1A2 mannosidase, alpha, class 1A, member 2 0.0133623
RPS6 ribosomal protein S6 0.0133321
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.0133111
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.0132483
STAU2 staufen double-stranded RNA binding protein 2 0.0132463
RPL37A ribosomal protein L37a 0.0130936
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0130222

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.295933
FN1 fibronectin 1 -0.200034
FNDC3B fibronectin type III domain containing 3B -0.121797
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.121313
SFTPA2 surfactant protein A2 -0.0926018
VIM vimentin -0.0806733
LDHA lactate dehydrogenase A -0.0735993
PMEL premelanosome protein -0.0684785
NRG3 neuregulin 3 -0.0682786
VDAC1 voltage-dependent anion channel 1 -0.0643089
MSI2 musashi RNA-binding protein 2 -0.0619102
NDRG1 N-myc downstream regulated 1 -0.0609175
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0602095
PDIA3 protein disulfide isomerase family A, member 3 -0.0601029
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0578838
CANX calnexin -0.0573389
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0571936
NAMPT nicotinamide phosphoribosyltransferase -0.057134
SREBF2 sterol regulatory element binding transcription factor 2 -0.0564056
SLC39A11 solute carrier family 39, member 11 -0.0556061
FMNL2 formin-like 2 -0.0544047
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0542521
CSDE1 cold shock domain containing E1, RNA-binding -0.0538866
LAMP2 lysosomal-associated membrane protein 2 -0.0515659
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0511205
UBC ubiquitin C -0.0497769
SPAG9 sperm associated antigen 9 -0.0483138
LSAMP limbic system-associated membrane protein -0.0480143
PGK1 phosphoglycerate kinase 1 -0.0479418
POTEF POTE ankyrin domain family, member F -0.0478767
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0466877
FMN1 formin 1 -0.0461359
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0436745
FRMD4A FERM domain containing 4A -0.0434152
CD44 CD44 molecule (Indian blood group) -0.043037
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0427456
MAP4 microtubule-associated protein 4 -0.041737
RHOA ras homolog family member A -0.0414167
RAB7A RAB7A, member RAS oncogene family -0.0413732
CLIC4 chloride intracellular channel 4 -0.0401566
CLIP4 CAP-GLY domain containing linker protein family, member 4 -0.0398322
NOTCH2 notch 2 -0.0393664
CLTC clathrin, heavy chain (Hc) -0.0387497
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.038058
SOD2 superoxide dismutase 2, mitochondrial -0.0378176
BBX bobby sox homolog (Drosophila) -0.0374528
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0371252
ANXA2 annexin A2 -0.0370933
WDR45B WD repeat domain 45B -0.0364163
ELL2 elongation factor, RNA polymerase II, 2 -0.0363079
SMAD3 SMAD family member 3 -0.0355687
TFRC transferrin receptor -0.0353766
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0352241
IL1RAP interleukin 1 receptor accessory protein -0.0350845
CLINT1 clathrin interactor 1 -0.0349709
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0347553
KMT2E lysine (K)-specific methyltransferase 2E -0.0344758
SETD5 SET domain containing 5 -0.0340824
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0336621
ADAM17 ADAM metallopeptidase domain 17 -0.0329693
GARS1 glycyl-tRNA synthetase 1 -0.0327654
MSN moesin -0.0325311
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 -0.0324789
RLIM ring finger protein, LIM domain interacting -0.0319021
TXNRD1 thioredoxin reductase 1 -0.0318062
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0317179
ICAM1 intercellular adhesion molecule 1 -0.031287
LOC112694756 uncharaterized LOC112694756 -0.0308996
UBE2H ubiquitin-conjugating enzyme E2H -0.0308902
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0308032
MORF4L2 mortality factor 4 like 2 -0.0304232
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 -0.0300499
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0296534
ZFAND3 zinc finger, AN1-type domain 3 -0.029644
RHEB Ras homolog enriched in brain -0.029621
H3-3B H3.3 histone B -0.0296139
HELZ helicase with zinc finger -0.02961
TAOK1 TAO kinase 1 -0.0294898
APOD apolipoprotein D -0.0290666
TENM1 teneurin transmembrane protein 1 -0.028974
TMEM263 transmembrane protein 263 -0.0289089
FOXO3 forkhead box O3 -0.0288676
WASF2 WAS protein family, member 2 -0.0288524
AFF4 AF4/FMR2 family, member 4 -0.028781
TRA2B transformer 2 beta homolog (Drosophila) -0.0286576
OXSR1 oxidative stress responsive 1 -0.0284996
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0282674
NPC1 Niemann-Pick disease, type C1 -0.0282586
CTTN cortactin -0.0282129
RTN4 reticulon 4 -0.0280634
FRMD5 FERM domain containing 5 -0.0277174
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha -0.0275511
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0273136
HMGA1 high mobility group AT-hook 1 -0.0273072
RPS23 ribosomal protein S23 -0.0272648
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0271621
BRWD3 bromodomain and WD repeat domain containing 3 -0.0267863
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0267735
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.026761
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0267304