Naproxen_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Naproxen perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Naproxen_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.18419
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.16299
EEF2 eukaryotic translation elongation factor 2 0.140873
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.134306
COL1A1 collagen, type I, alpha 1 0.109355
COL3A1 collagen, type III, alpha 1 0.102562
MSI2 musashi RNA-binding protein 2 0.0704357
RPL4 ribosomal protein L4 0.0670599
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0639841
VGF VGF nerve growth factor inducible 0.0635672
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0634419
ZMIZ1 zinc finger, MIZ-type containing 1 0.0617498
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0592744
UBC ubiquitin C 0.0588962
MYH9 myosin, heavy chain 9, non-muscle 0.0577168
NCOR2 nuclear receptor corepressor 2 0.0561379
PCBP2 poly(rC) binding protein 2 0.0554654
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0546129
AHNAK AHNAK nucleoprotein 0.0544014
HMGB2 high mobility group box 2 0.0537491
ACTG1 actin gamma 1 0.0528675
PKM pyruvate kinase, muscle 0.0520558
MED13L mediator complex subunit 13-like 0.0498039
SRRM2 serine/arginine repetitive matrix 2 0.0493589
RPS27A ribosomal protein S27a 0.0492197
POTEF POTE ankyrin domain family, member F 0.0464376
PRRC2C proline-rich coiled-coil 2C 0.0463113
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0458394
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0453453
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0437467
VMP1 vacuole membrane protein 1 0.0436909
EIF4A1 eukaryotic translation initiation factor 4A1 0.0432328
COL18A1 collagen, type XVIII, alpha 1 0.0427878
USP9X ubiquitin specific peptidase 9, X-linked 0.0426138
SEPTIN9 septin 9 0.0423987
GOLGA4 golgin A4 0.0422124
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0414737
PRRC2B proline-rich coiled-coil 2B 0.0407308
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0407275
FTH1 ferritin, heavy polypeptide 1 0.0400013
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0398954
HSPA8 heat shock 70kDa protein 8 0.039868
DSCAM Down syndrome cell adhesion molecule 0.0392426
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0387911
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0381416
NAP1L1 nucleosome assembly protein 1-like 1 0.0381134
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0373154
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0370434
ENO1 enolase 1, (alpha) 0.0369632
RACK1 receptor for activated C kinase 1 0.0361696
SET SET nuclear proto-oncogene 0.0356188
BCLAF1 BCL2-associated transcription factor 1 0.0352357
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0348969
ZCCHC7 zinc finger, CCHC domain containing 7 0.0345376
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.0343822
FLNA filamin A, alpha 0.0342404
RHOA ras homolog family member A 0.0340166
NCKAP1 NCK-associated protein 1 0.0338232
CALR calreticulin 0.0334252
PSD3 pleckstrin and Sec7 domain containing 3 0.0332851
FAM107B family with sequence similarity 107, member B 0.0330647
FNDC3B fibronectin type III domain containing 3B 0.0319554
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0318249
SOX9 SRY (sex determining region Y)-box 9 0.0314966
ZFP36L1 ZFP36 ring finger protein-like 1 0.0312448
MATR3 matrin 3 0.0310566
ERRFI1 ERBB receptor feedback inhibitor 1 0.0310418
PTMA prothymosin, alpha 0.0309113
PDGFRB platelet-derived growth factor receptor, beta polypeptide 0.0305413
LPIN1 lipin 1 0.0301756
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.029712
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0293561
NALF1 NALCN channel auxiliary factor 1 0.0291409
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0290951
ANKRD11 ankyrin repeat domain 11 0.0286889
RPL3 ribosomal protein L3 0.0284151
KDM4B lysine (K)-specific demethylase 4B 0.0283805
SMAD3 SMAD family member 3 0.0282624
ZBTB20 zinc finger and BTB domain containing 20 0.0281312
TXNRD1 thioredoxin reductase 1 0.0281247
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0280353
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0278314
PCNX1 pecanex 1 0.0276341
NFE2L1 nuclear factor, erythroid 2-like 1 0.0274251
ATXN2 ataxin 2 0.0273682
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A 0.0272953
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0272329
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.02708
BRWD1 bromodomain and WD repeat domain containing 1 0.0270196
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0269981
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0269963
VEGFA vascular endothelial growth factor A 0.0269488
ARHGAP9 Rho GTPase activating protein 9 0.0269363
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0265867
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0265467
HDGF hepatoma-derived growth factor 0.0264243
NRIP1 nuclear receptor interacting protein 1 0.0263342
IPO7 importin 7 0.0261773
AKAP12 A kinase (PRKA) anchor protein 12 0.0260284
QKI QKI, KH domain containing, RNA binding 0.0259867

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.27865
IGF2 insulin-like growth factor 2 -0.0935489
RPL38 ribosomal protein L38 -0.0823043
SYT1 synaptotagmin I -0.0785028
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0579211
ADGRG6 adhesion G protein-coupled receptor G6 -0.0564314
NCAM2 neural cell adhesion molecule 2 -0.0550111
BPTF bromodomain PHD finger transcription factor -0.0517147
NRG1 neuregulin 1 -0.049539
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.049018
HAND2 heart and neural crest derivatives expressed 2 -0.0484991
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0481084
TLE4 transducin-like enhancer of split 4 -0.0459135
RPLP1 ribosomal protein, large, P1 -0.0458391
CLTC clathrin, heavy chain (Hc) -0.0455631
MBD5 methyl-CpG binding domain protein 5 -0.044801
PHF14 PHD finger protein 14 -0.0443654
ITPRID2 ITPR interacting domain containing 2 -0.0441687
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0413605
EDEM3 ER degradation enhancer, mannosidase alpha-like 3 -0.0396881
EIF1 eukaryotic translation initiation factor 1 -0.0381508
MBTD1 mbt domain containing 1 -0.0378798
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0377308
RPL35A ribosomal protein L35a -0.0374296
H3-3B H3.3 histone B -0.0372108
TPST1 tyrosylprotein sulfotransferase 1 -0.0367255
PTPRD protein tyrosine phosphatase, receptor type, D -0.035811
PDE4D phosphodiesterase 4D, cAMP-specific -0.0357106
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0355165
NREP neuronal regeneration related protein -0.0350468
ACBD6 acyl-CoA binding domain containing 6 -0.0349824
BCAS3 breast carcinoma amplified sequence 3 -0.0346021
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B -0.0340317
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0338252
ADGRB3 adhesion G protein-coupled receptor B3 -0.0330874
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0324772
PPP4R3B protein phosphatase 4 regulatory subunit 3B -0.0323932
UNC5C unc-5 homolog C (C. elegans) -0.0313749
RPS24 ribosomal protein S24 -0.030834
GREM2 gremlin 2, DAN family BMP antagonist -0.0307761
SMYD3 SET and MYND domain containing 3 -0.030771
LIMCH1 LIM and calponin homology domains 1 -0.0301718
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.029966
NPEPPS aminopeptidase puromycin sensitive -0.0297213
CENPF centromere protein F, 350/400kDa -0.0291193
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0290081
BOD1L1 biorientation of chromosomes in cell division 1-like 1 -0.0289873
DPH6 diphthamine biosynthesis 6 -0.0289592
NEK7 NIMA-related kinase 7 -0.0287524
RPL12 ribosomal protein L12 -0.0281423
RFX3 regulatory factor X, 3 (influences HLA class II expression) -0.0277805
MYH10 myosin, heavy chain 10, non-muscle -0.0277389
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0275204
TENT2 terminal nucleotidyltransferase 2 -0.02749
SCAF11 SR-related CTD-associated factor 11 -0.0271998
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0271003
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0266364
KAT6B K(lysine) acetyltransferase 6B -0.0265462
TAS2R14 taste receptor, type 2, member 14 -0.0264958
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa -0.0262397
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 -0.0262073
ERBIN erbb2 interacting protein -0.0260589
PHF21A PHD finger protein 21A -0.0257152
RBMX RNA binding motif protein, X-linked -0.0257132
ANKRD50 ankyrin repeat domain 50 -0.0256159
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0255502
B2M beta-2-microglobulin -0.0252808
BSG basigin (Ok blood group) -0.025107
INTU inturned planar cell polarity protein -0.0250603
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0245392
PBX1 pre-B-cell leukemia homeobox 1 -0.0245187
SYNE1 spectrin repeat containing, nuclear envelope 1 -0.0244879
FHIT fragile histidine triad -0.0243768
PRTG protogenin -0.0241714
PIK3C2G phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma -0.0239688
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0238924
PHOX2B paired-like homeobox 2b -0.0237074
TFB1M transcription factor B1, mitochondrial -0.0235741
PRR11 proline rich 11 -0.0234245
NBEA neurobeachin -0.02342
FBXL4 F-box and leucine-rich repeat protein 4 -0.0233505
RPL19 ribosomal protein L19 -0.0233342
STC1 stanniocalcin 1 -0.0233333
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0232696
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0230636
PIBF1 progesterone immunomodulatory binding factor 1 -0.023061
NFX1 nuclear transcription factor, X-box binding 1 -0.0229701
KCNT2 potassium channel, sodium activated subfamily T, member 2 -0.022941
SLIT2 slit homolog 2 (Drosophila) -0.0228617
RHOBTB3 Rho-related BTB domain containing 3 -0.0227156
EYA1 EYA transcriptional coactivator and phosphatase 1 -0.0226228
TENM3 teneurin transmembrane protein 3 -0.0225684
CDC27 cell division cycle 27 -0.0224941
FNBP1 formin binding protein 1 -0.0223907
RPS5 ribosomal protein S5 -0.0222288
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0220309
SON SON DNA binding protein -0.0216459
PCDH10 protocadherin 10 -0.0214749
RPS11 ribosomal protein S11 -0.0211657
TMEM263 transmembrane protein 263 -0.0208652