Neratinib (maleate)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Neratinib (maleate) perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Neratinib (maleate)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.172679
NAV3 neuron navigator 3 0.170914
EXT1 exostosin glycosyltransferase 1 0.16267
TXNRD1 thioredoxin reductase 1 0.137136
ANK2 ankyrin 2, neuronal 0.125089
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.11498
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.114335
ARHGAP22 Rho GTPase activating protein 22 0.0974214
MCL1 myeloid cell leukemia 1 0.0972181
STC1 stanniocalcin 1 0.0968365
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0947258
RPL3 ribosomal protein L3 0.0944489
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0861269
CREB5 cAMP responsive element binding protein 5 0.0853709
IARS1 isoleucyl-tRNA synthetase 1 0.0799737
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0771502
GARS1 glycyl-tRNA synthetase 1 0.0745059
JMJD1C jumonji domain containing 1C 0.0731968
HDAC9 histone deacetylase 9 0.0716443
ZEB1 zinc finger E-box binding homeobox 1 0.0702185
CORO1C coronin, actin binding protein, 1C 0.0673767
DGKI diacylglycerol kinase, iota 0.0660003
RPS18 ribosomal protein S18 0.0651504
ACTG1 actin gamma 1 0.0603633
TIMP1 TIMP metallopeptidase inhibitor 1 0.0569373
FRMD4A FERM domain containing 4A 0.0566777
MAPKAP1 mitogen-activated protein kinase associated protein 1 0.0564434
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0563177
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0559627
MYH9 myosin, heavy chain 9, non-muscle 0.0547896
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0540385
RPS12 ribosomal protein S12 0.0520536
UPP1 uridine phosphorylase 1 0.0517789
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0511353
JUN jun proto-oncogene 0.0509043
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 0.050484
AKAP12 A kinase (PRKA) anchor protein 12 0.0502336
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 0.0500423
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0486905
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0486176
COG5 component of oligomeric golgi complex 5 0.0481526
ZNF438 zinc finger protein 438 0.046235
FLNB filamin B, beta 0.0459278
SGMS2 sphingomyelin synthase 2 0.0459031
FHIT fragile histidine triad 0.0452702
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.045145
SAMD4A sterile alpha motif domain containing 4A 0.0450013
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.0444823
ENO1 enolase 1, (alpha) 0.0440386
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0437987
APP amyloid beta (A4) precursor protein 0.0434423
TPM3 tropomyosin 3 0.0432328
CD68 CD68 molecule 0.0424456
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0423336
RPS3 ribosomal protein S3 0.0419946
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0406604
MCTP1 multiple C2 domains, transmembrane 1 0.0404253
DST dystonin 0.0399505
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0398239
WARS1 tryptophanyl-tRNA synthetase 1 0.0393496
TPM4 tropomyosin 4 0.0389037
GLRX glutaredoxin (thioltransferase) 0.0385433
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0382964
ZFAND3 zinc finger, AN1-type domain 3 0.0380275
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0376605
UBC ubiquitin C 0.0364805
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0364495
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0350615
RPS2 ribosomal protein S2 0.0344981
EIF1 eukaryotic translation initiation factor 1 0.0344923
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0341111
CCNY cyclin Y 0.0335129
EEF1G eukaryotic translation elongation factor 1 gamma 0.0334445
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0330029
TM4SF19 transmembrane 4 L six family member 19 0.0328057
PTPRG protein tyrosine phosphatase, receptor type, G 0.0320582
CARD16 caspase recruitment domain family, member 16 0.031894
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0317917
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0316706
PCBP2 poly(rC) binding protein 2 0.0314046
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0312506
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.0311369
SMYD3 SET and MYND domain containing 3 0.0311335
PSAT1 phosphoserine aminotransferase 1 0.0311293
ZBTB43 zinc finger and BTB domain containing 43 0.0310757
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0308974
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0308321
RACK1 receptor for activated C kinase 1 0.0308234
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0306217
CAPRIN2 caprin family member 2 0.0301822
MAP4 microtubule-associated protein 4 0.0297725
SLC38A1 solute carrier family 38, member 1 0.0296949
YARS1 tyrosyl-tRNA synthetase 1 0.0296521
EXOC6B exocyst complex component 6B 0.0295172
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0295
PGK1 phosphoglycerate kinase 1 0.029263
LIMA1 LIM domain and actin binding 1 0.0291446
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0287513
ZBTB38 zinc finger and BTB domain containing 38 0.0287417
SND1 staphylococcal nuclease and tudor domain containing 1 0.0284146

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.139112
IFI16 interferon, gamma-inducible protein 16 -0.0780011
RPL35A ribosomal protein L35a -0.0758049
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0665489
TPT1 tumor protein, translationally-controlled 1 -0.060422
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0596468
TTR transthyretin -0.0553551
RPS24 ribosomal protein S24 -0.0538371
DLC1 DLC1 Rho GTPase activating protein -0.0516148
PTMA prothymosin, alpha -0.0508214
RPS21 ribosomal protein S21 -0.0496182
MKI67 marker of proliferation Ki-67 -0.0473288
MT1X metallothionein 1X -0.0445714
DIAPH3 diaphanous-related formin 3 -0.0418262
SMC4 structural maintenance of chromosomes 4 -0.0418057
RAB3IP RAB3A interacting protein -0.0406388
ATAD2 ATPase family, AAA domain containing 2 -0.0403092
KPNB1 karyopherin (importin) beta 1 -0.0393162
DEK DEK proto-oncogene -0.0356405
CENPF centromere protein F, 350/400kDa -0.0352144
RAD21 RAD21 homolog (S. pombe) -0.0333249
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0318939
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0303831
BZW1 basic leucine zipper and W2 domains 1 -0.0303778
RPL34 ribosomal protein L34 -0.0296366
ERBIN erbb2 interacting protein -0.0292719
PFN1 profilin 1 -0.0292197
NAP1L1 nucleosome assembly protein 1-like 1 -0.0290508
PCNX4 pecanex 4 -0.0290058
HMGA2 high mobility group AT-hook 2 -0.0285498
SCLT1 sodium channel and clathrin linker 1 -0.0272921
HELLS helicase, lymphoid-specific -0.0272232
HMGB1 high mobility group box 1 -0.0270594
SLC38A2 solute carrier family 38, member 2 -0.0269446
ALCAM activated leukocyte cell adhesion molecule -0.0265594
HMGB2 high mobility group box 2 -0.0262182
MTAP methylthioadenosine phosphorylase -0.0261643
S100A9 S100 calcium binding protein A9 -0.0254445
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0252588
RRM2 ribonucleotide reductase M2 -0.0249733
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.024895
RPS15 ribosomal protein S15 -0.0241846
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.023812
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0232206
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0231246
RPL8 ribosomal protein L8 -0.0223511
B2M beta-2-microglobulin -0.0220141
WNT2B wingless-type MMTV integration site family, member 2B -0.0217977
RPL23 ribosomal protein L23 -0.0217774
GNAS GNAS complex locus -0.0217236
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0214291
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0213402
ISG15 ISG15 ubiquitin-like modifier -0.0212998
IFITM1 interferon induced transmembrane protein 1 -0.0210846
RPS11 ribosomal protein S11 -0.0208066
IFITM2 interferon induced transmembrane protein 2 -0.0206114
KDM3A lysine (K)-specific demethylase 3A -0.0205672
BNC2 basonuclin 2 -0.0204713
RPLP0 ribosomal protein, large, P0 -0.0204205
RPL32 ribosomal protein L32 -0.0197655
PHIP pleckstrin homology domain interacting protein -0.0196082
FAF1 Fas (TNFRSF6) associated factor 1 -0.0190968
RPLP1 ribosomal protein, large, P1 -0.0190625
NOP56 NOP56 ribonucleoprotein -0.0188522
MX2 MX dynamin-like GTPase 2 -0.0186674
MIS18BP1 MIS18 binding protein 1 -0.0186272
RPLP2 ribosomal protein, large, P2 -0.0179797
TUBA1B tubulin, alpha 1b -0.0177698
STAU2 staufen double-stranded RNA binding protein 2 -0.0177671
FUS FUS RNA binding protein -0.0177463
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0175921
MCM4 minichromosome maintenance complex component 4 -0.0174578
KIF20B kinesin family member 20B -0.0173974
TPX2 TPX2, microtubule-associated -0.0173641
NASP nuclear autoantigenic sperm protein (histone-binding) -0.0173493
RRBP1 ribosome binding protein 1 -0.017103
RIGI RNA sensor RIG-I -0.0170216
CBX3 chromobox homolog 3 -0.0169766
RPS27A ribosomal protein S27a -0.0169335
VDAC1 voltage-dependent anion channel 1 -0.016928
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0168511
FANCI Fanconi anemia, complementation group I -0.0168303
CDC27 cell division cycle 27 -0.0164014
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.016166
PSIP1 PC4 and SFRS1 interacting protein 1 -0.0161462
SLC44A1 solute carrier family 44 (choline transporter), member 1 -0.0158938
ATP5F1B ATP synthase F1 subunit beta -0.0158672
SNX14 sorting nexin 14 -0.0158375
CCT8 chaperonin containing TCP1, subunit 8 (theta) -0.0157887
ATF7IP activating transcription factor 7 interacting protein -0.0157853
TUBB tubulin, beta class I -0.0157247
ATAD5 ATPase family, AAA domain containing 5 -0.0154573
NUSAP1 nucleolar and spindle associated protein 1 -0.0152863
NSD2 nuclear receptor binding SET domain protein 2 -0.0148682
KNL1 kinetochore scaffold 1 -0.0148517
ECT2 epithelial cell transforming 2 -0.0148096
ENY2 enhancer of yellow 2 homolog (Drosophila) -0.0146637
RPL30 ribosomal protein L30 -0.0144793
IFITM3 interferon induced transmembrane protein 3 -0.0144425
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.014359