Neratinib (maleate)_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Neratinib (maleate) perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Neratinib (maleate)_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.126679
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.10136
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0889776
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0832034
RTN4 reticulon 4 0.0694742
ZFAND3 zinc finger, AN1-type domain 3 0.0681945
GOLGA4 golgin A4 0.0651768
NCEH1 neutral cholesterol ester hydrolase 1 0.0619595
JMJD1C jumonji domain containing 1C 0.061058
ANK2 ankyrin 2, neuronal 0.0597877
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0591601
ZNF292 zinc finger protein 292 0.0569486
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0559964
TXNRD1 thioredoxin reductase 1 0.0529188
EML4 echinoderm microtubule associated protein like 4 0.0522953
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0516166
EFNA5 ephrin-A5 0.0496746
PICALM phosphatidylinositol binding clathrin assembly protein 0.0488344
QKI QKI, KH domain containing, RNA binding 0.0460636
EEF2 eukaryotic translation elongation factor 2 0.0459485
COG5 component of oligomeric golgi complex 5 0.0452356
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.044483
RBM39 RNA binding motif protein 39 0.0442334
EXT1 exostosin glycosyltransferase 1 0.0441239
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0429117
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0425767
NBAS neuroblastoma amplified sequence 0.0415575
KMT2E lysine (K)-specific methyltransferase 2E 0.0409334
KDM3A lysine (K)-specific demethylase 3A 0.0391607
TMEM65 transmembrane protein 65 0.0380748
GARS1 glycyl-tRNA synthetase 1 0.0369246
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0363575
VMP1 vacuole membrane protein 1 0.0363354
PGK1 phosphoglycerate kinase 1 0.0358708
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.0354471
TMEM41B transmembrane protein 41B 0.0353657
ELOVL5 ELOVL fatty acid elongase 5 0.0347316
EZR ezrin 0.0346957
TBC1D5 TBC1 domain family, member 5 0.0345262
NAMPT nicotinamide phosphoribosyltransferase 0.0341744
ZEB1 zinc finger E-box binding homeobox 1 0.0337648
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.033738
YAP1 Yes-associated protein 1 0.0335167
FNDC3B fibronectin type III domain containing 3B 0.0333546
TJP1 tight junction protein 1 0.0333016
SETD5 SET domain containing 5 0.0332703
FOXJ3 forkhead box J3 0.0330861
MON2 MON2 homolog (S. cerevisiae) 0.0330374
SSBP2 single-stranded DNA binding protein 2 0.0330203
KDM4C lysine (K)-specific demethylase 4C 0.0327321
SEC31A SEC31 homolog A (S. cerevisiae) 0.0325901
EGFR epidermal growth factor receptor 0.0325717
CAMTA1 calmodulin binding transcription activator 1 0.0319241
SBF2 SET binding factor 2 0.0314154
IARS1 isoleucyl-tRNA synthetase 1 0.0314012
LPP LIM domain containing preferred translocation partner in lipoma 0.031397
EIF4A2 eukaryotic translation initiation factor 4A2 0.0313385
PTPRG protein tyrosine phosphatase, receptor type, G 0.0313277
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0309282
WAC WW domain containing adaptor with coiled-coil 0.0308947
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0305582
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0304732
DOCK3 dedicator of cytokinesis 3 0.0304246
RNF145 ring finger protein 145 0.0300593
ZCCHC7 zinc finger, CCHC domain containing 7 0.0300528
HDLBP high density lipoprotein binding protein 0.0298288
USP3 ubiquitin specific peptidase 3 0.0296662
CDC73 cell division cycle 73 0.0296603
NUP58 nucleoporin 58 0.0295479
NCKAP1 NCK-associated protein 1 0.0291945
PRRC2C proline-rich coiled-coil 2C 0.0289378
SMYD3 SET and MYND domain containing 3 0.0288411
USP47 ubiquitin specific peptidase 47 0.0275948
MSI2 musashi RNA-binding protein 2 0.027212
RAB1A RAB1A, member RAS oncogene family 0.0270619
LOC112694756 uncharaterized LOC112694756 0.026877
TFG TRK-fused gene 0.0265072
ADAM9 ADAM metallopeptidase domain 9 0.0264182
BTBD9 BTB (POZ) domain containing 9 0.0263551
RREB1 ras responsive element binding protein 1 0.0263054
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0262764
ZFC3H1 zinc finger, C3H1-type containing 0.0262316
PTBP2 polypyrimidine tract binding protein 2 0.0260108
HM13 histocompatibility (minor) 13 0.0259823
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0256593
BRWD1 bromodomain and WD repeat domain containing 1 0.0256196
TBC1D22A TBC1 domain family, member 22A 0.0255842
TMEM135 transmembrane protein 135 0.0255126
ZMYM2 zinc finger, MYM-type 2 0.0254807
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0253945
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0253928
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.0251679
PTK2 protein tyrosine kinase 2 0.0249259
TTC3 tetratricopeptide repeat domain 3 0.0249003
GLS2 glutaminase 2 (liver, mitochondrial) 0.0247912
ZNF608 zinc finger protein 608 0.0247102
KMT2C lysine (K)-specific methyltransferase 2C 0.0244967
TGFBR3 transforming growth factor, beta receptor III 0.0240839
PHF21A PHD finger protein 21A 0.0240421
FBXO11 F-box protein 11 0.0240055

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.316243
BMP10 bone morphogenetic protein 10 -0.128597
MKI67 marker of proliferation Ki-67 -0.0899567
NAV2 neuron navigator 2 -0.078104
RPS8 ribosomal protein S8 -0.0747239
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0724765
CENPF centromere protein F, 350/400kDa -0.0691666
TPT1 tumor protein, translationally-controlled 1 -0.0666931
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0646202
SMC4 structural maintenance of chromosomes 4 -0.0632896
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0623645
RPS6 ribosomal protein S6 -0.0606237
RPS12 ribosomal protein S12 -0.0559196
RPLP1 ribosomal protein, large, P1 -0.0547639
RPS3 ribosomal protein S3 -0.0542868
PKM pyruvate kinase, muscle -0.0542369
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.053391
VCL vinculin -0.0527845
RPL26 ribosomal protein L26 -0.0514614
SOX6 SRY (sex determining region Y)-box 6 -0.0491034
DIAPH3 diaphanous-related formin 3 -0.0488987
RPL37A ribosomal protein L37a -0.0456173
HJURP Holliday junction recognition protein -0.0441555
RPL35A ribosomal protein L35a -0.0434313
MYO5C myosin VC -0.043361
TM4SF1 transmembrane 4 L six family member 1 -0.0428092
RPL36 ribosomal protein L36 -0.0414823
FOXP1 forkhead box P1 -0.0414403
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0411087
RPL9 ribosomal protein L9 -0.0407014
GLI3 GLI family zinc finger 3 -0.0406852
RPL34 ribosomal protein L34 -0.0396205
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0391169
TMSB10 thymosin beta 10 -0.0381165
UNC13A unc-13 homolog A (C. elegans) -0.0379455
S100A4 S100 calcium binding protein A4 -0.0378627
RPL23 ribosomal protein L23 -0.0378566
EMP3 epithelial membrane protein 3 -0.0377534
TPX2 TPX2, microtubule-associated -0.0375716
RPL31 ribosomal protein L31 -0.0369839
TPM4 tropomyosin 4 -0.0358775
CENPE centromere protein E, 312kDa -0.0354866
RPL19 ribosomal protein L19 -0.0350654
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0342551
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0341133
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 -0.0339175
SCLT1 sodium channel and clathrin linker 1 -0.033839
MYL12B myosin, light chain 12B, regulatory -0.0337029
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.033252
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0332055
ZMYND8 zinc finger, MYND-type containing 8 -0.0331004
RRM2 ribonucleotide reductase M2 -0.0325036
RPS13 ribosomal protein S13 -0.0319427
RPS19 ribosomal protein S19 -0.0318781
RPS27 ribosomal protein S27 -0.0318689
NBEA neurobeachin -0.031819
TMSB4X thymosin beta 4, X-linked -0.0315665
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0314489
ZNF438 zinc finger protein 438 -0.0312994
TUBB4B tubulin, beta 4B class IVb -0.0312988
RPL12 ribosomal protein L12 -0.0305063
RFC3 replication factor C (activator 1) 3, 38kDa -0.0298535
PDE4B phosphodiesterase 4B, cAMP-specific -0.029749
GSE1 Gse1 coiled-coil protein -0.0297018
RPLP2 ribosomal protein, large, P2 -0.0291507
PDE7B phosphodiesterase 7B -0.0287514
RPS21 ribosomal protein S21 -0.0284279
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0283107
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0276079
HSPB1 heat shock 27kDa protein 1 -0.027433
EBNA1BP2 EBNA1 binding protein 2 -0.0272725
LOC102724023 ES1 protein homolog, mitochondrial -0.0269194
NPAS2 neuronal PAS domain protein 2 -0.0261877
RPS27A ribosomal protein S27a -0.0257081
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0254089
CEP112 centrosomal protein 112kDa -0.0247598
PTMS parathymosin -0.0247552
HMGB1 high mobility group box 1 -0.0245549
NUSAP1 nucleolar and spindle associated protein 1 -0.0240655
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0237424
NAP1L1 nucleosome assembly protein 1-like 1 -0.0235273
ANLN anillin, actin binding protein -0.0233255
ITGA10 integrin, alpha 10 -0.0233248
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0232267
PDE4D phosphodiesterase 4D, cAMP-specific -0.0231441
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0230648
RPL11 ribosomal protein L11 -0.0230229
PRUNE2 prune homolog 2 (Drosophila) -0.0228747
ARL4C ADP-ribosylation factor-like 4C -0.0226189
RPS17 ribosomal protein S17 -0.022605
ATAD2 ATPase family, AAA domain containing 2 -0.0225385
PRDX2 peroxiredoxin 2 -0.02242
RPL37 ribosomal protein L37 -0.0224172
TPI1 triosephosphate isomerase 1 -0.0214674
FMN1 formin 1 -0.0214098
B2M beta-2-microglobulin -0.0213413
SDK1 sidekick cell adhesion molecule 1 -0.0210531
TTC28 tetratricopeptide repeat domain 28 -0.0207572
RPS23 ribosomal protein S23 -0.0206937
ARHGAP11A Rho GTPase activating protein 11A -0.0206346